EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000002488 (Gene tree)
Gene ID: 113136145
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein Musashi homolog 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 222267 bases
Position: chrOOHQ01000107.1:35648905-35871171
Accession: 113136145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000003712	RRM_1	PF00076.22	9.4e-32	1	2
ENSMAMP00000003712	RRM_1	PF00076.22	9.4e-32	2	2
ENSMAMP00000003682	RRM_1	PF00076.22	1.5e-31	1	2
ENSMAMP00000003682	RRM_1	PF00076.22	1.5e-31	2	2
ENSMAMP00000003702	RRM_1	PF00076.22	1.6e-31	1	2
ENSMAMP00000003702	RRM_1	PF00076.22	1.6e-31	2	2
ENSMAMP00000003772	RRM_1	PF00076.22	2.4e-27	1	2
ENSMAMP00000003772	RRM_1	PF00076.22	2.4e-27	2	2
ENSMAMP00000003731	RRM_1	PF00076.22	1.5e-25	1	2
ENSMAMP00000003731	RRM_1	PF00076.22	1.5e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000003767	-	4726	-	ENSMAMP00000003682	414 (aa)	XP_026172454	UPI000E459AF8
ENSMAMT00000003797	-	1347	-	ENSMAMP00000003712	357 (aa)	XP_026172490	UPI000E462C50
ENSMAMT00000003787	-	1545	-	ENSMAMP00000003702	423 (aa)	XP_026172446	UPI000E462863
ENSMAMT00000003816	-	735	-	ENSMAMP00000003731	153 (aa)	-	-
ENSMAMT00000003858	-	996	-	ENSMAMP00000003772	331 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000002488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000002488	-	85	33.333	ENSMAMG00000017754	HNRNPA0	70	36.047
ENSMAMG00000002488	-	99	94.040	ENSMAMG00000010503	msi2a	100	94.650
ENSMAMG00000002488	-	85	42.424	ENSMAMG00000007606	-	96	35.106
ENSMAMG00000002488	-	90	37.121	ENSMAMG00000017728	-	71	39.891
ENSMAMG00000002488	-	58	32.222	ENSMAMG00000003753	TRA2B	55	30.841
ENSMAMG00000002488	-	88	48.889	ENSMAMG00000020142	-	75	44.000
ENSMAMG00000002488	-	88	81.343	ENSMAMG00000018426	-	92	77.682
ENSMAMG00000002488	-	85	40.909	ENSMAMG00000006307	HNRNPA3	72	37.339
ENSMAMG00000002488	-	99	78.808	ENSMAMG00000002279	MSI1	97	71.795
ENSMAMG00000002488	-	88	50.370	ENSMAMG00000004971	hnrnpd	72	48.684
ENSMAMG00000002488	-	88	52.593	ENSMAMG00000008021	hnrnpaba	66	44.000
ENSMAMG00000002488	-	85	50.000	ENSMAMG00000005746	dazap1	62	42.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002488	-	99	92.715	ENSG00000153944	MSI2	97	92.829	Homo_sapiens
ENSMAMG00000002488	-	99	94.040	ENSAPOG00000001658	msi2a	100	94.650	Acanthochromis_polyacanthus
ENSMAMG00000002488	-	85	96.154	ENSAMEG00000002697	MSI2	96	88.217	Ailuropoda_melanoleuca
ENSMAMG00000002488	-	95	94.378	ENSACIG00000009475	msi2a	100	78.469	Amphilophus_citrinellus
ENSMAMG00000002488	-	98	76.667	ENSAOCG00000014822	msi2a	69	85.185	Amphiprion_ocellaris
ENSMAMG00000002488	-	99	94.040	ENSAPEG00000007706	msi2a	100	90.096	Amphiprion_percula
ENSMAMG00000002488	-	85	100.000	ENSATEG00000003301	-	100	96.043	Anabas_testudineus
ENSMAMG00000002488	-	99	94.040	ENSATEG00000010498	msi2a	100	94.650	Anabas_testudineus
ENSMAMG00000002488	-	85	95.604	ENSACAG00000005452	MSI2	88	74.211	Anolis_carolinensis
ENSMAMG00000002488	-	99	92.715	ENSANAG00000037827	MSI2	97	92.829	Aotus_nancymaae
ENSMAMG00000002488	-	99	94.040	ENSACLG00000007752	msi2a	100	94.239	Astatotilapia_calliptera
ENSMAMG00000002488	-	99	96.026	ENSAMXG00000032796	msi2a	97	96.813	Astyanax_mexicanus
ENSMAMG00000002488	-	99	95.364	ENSAMXG00000010474	msi2b	100	92.332	Astyanax_mexicanus
ENSMAMG00000002488	-	99	90.066	ENSBTAG00000004406	MSI2	94	94.783	Bos_taurus
ENSMAMG00000002488	-	88	73.134	WBGene00003423	msi-1	68	73.134	Caenorhabditis_elegans
ENSMAMG00000002488	-	99	92.715	ENSCJAG00000013998	MSI2	97	92.829	Callithrix_jacchus
ENSMAMG00000002488	-	85	95.614	ENSCAFG00020025620	MSI2	81	85.161	Canis_lupus_dingo
ENSMAMG00000002488	-	99	90.066	ENSCHIG00000016580	MSI2	97	91.235	Capra_hircus
ENSMAMG00000002488	-	88	85.461	ENSCPOG00000034042	MSI2	99	85.461	Cavia_porcellus
ENSMAMG00000002488	-	99	92.715	ENSCCAG00000033927	MSI2	97	92.829	Cebus_capucinus
ENSMAMG00000002488	-	92	94.286	ENSCATG00000040879	MSI2	97	92.430	Cercocebus_atys
ENSMAMG00000002488	-	99	92.715	ENSCLAG00000014325	MSI2	96	87.164	Chinchilla_lanigera
ENSMAMG00000002488	-	99	92.715	ENSCSAG00000005633	MSI2	97	92.829	Chlorocebus_sabaeus
ENSMAMG00000002488	-	69	86.275	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSMAMG00000002488	-	88	95.074	ENSCPBG00000009942	MSI2	89	95.028	Chrysemys_picta_bellii
ENSMAMG00000002488	-	85	82.979	ENSCING00000018579	-	94	52.558	Ciona_intestinalis
ENSMAMG00000002488	-	87	67.606	ENSCSAVG00000010397	-	67	67.943	Ciona_savignyi
ENSMAMG00000002488	-	85	96.154	ENSCANG00000036414	MSI2	91	94.170	Colobus_angolensis_palliatus
ENSMAMG00000002488	-	99	92.053	ENSCGRG00001013330	Msi2	97	92.430	Cricetulus_griseus_chok1gshd
ENSMAMG00000002488	-	85	96.154	ENSCGRG00000003141	Msi2	100	84.887	Cricetulus_griseus_crigri
ENSMAMG00000002488	-	77	70.103	ENSCSEG00000013557	msi2a	79	81.538	Cynoglossus_semilaevis
ENSMAMG00000002488	-	99	91.176	ENSCSEG00000013549	msi2a	100	73.770	Cynoglossus_semilaevis
ENSMAMG00000002488	-	99	92.647	ENSCSEG00000003266	-	96	87.692	Cynoglossus_semilaevis
ENSMAMG00000002488	-	99	94.040	ENSCVAG00000017075	msi2a	100	94.650	Cyprinodon_variegatus
ENSMAMG00000002488	-	99	92.053	ENSDARG00000033901	msi2a	100	80.435	Danio_rerio
ENSMAMG00000002488	-	99	96.689	ENSDARG00000032614	msi2b	100	97.396	Danio_rerio
ENSMAMG00000002488	-	85	95.495	ENSDNOG00000014501	MSI2	97	94.313	Dasypus_novemcinctus
ENSMAMG00000002488	-	74	95.575	ENSDORG00000028440	-	100	95.575	Dipodomys_ordii
ENSMAMG00000002488	-	77	78.680	ENSDORG00000005394	Msi2	79	89.231	Dipodomys_ordii
ENSMAMG00000002488	-	85	85.106	FBgn0260943	Rbp6	88	65.972	Drosophila_melanogaster
ENSMAMG00000002488	-	84	95.000	ENSETEG00000012450	-	64	72.368	Echinops_telfairi
ENSMAMG00000002488	-	91	79.048	ENSEBUG00000006732	msi2a	79	79.048	Eptatretus_burgeri
ENSMAMG00000002488	-	95	93.720	ENSEASG00005002965	MSI2	97	78.507	Equus_asinus_asinus
ENSMAMG00000002488	-	99	92.715	ENSECAG00000011435	MSI2	98	83.954	Equus_caballus
ENSMAMG00000002488	-	81	78.656	ENSEEUG00000007810	MSI2	100	78.656	Erinaceus_europaeus
ENSMAMG00000002488	-	99	96.689	ENSELUG00000011747	msi2a	100	91.374	Esox_lucius
ENSMAMG00000002488	-	99	95.395	ENSELUG00000001361	msi2b	100	86.866	Esox_lucius
ENSMAMG00000002488	-	99	92.715	ENSFCAG00000041686	MSI2	97	92.829	Felis_catus
ENSMAMG00000002488	-	99	77.483	ENSFCAG00000033787	-	85	73.292	Felis_catus
ENSMAMG00000002488	-	85	96.154	ENSFDAG00000016118	MSI2	100	85.161	Fukomys_damarensis
ENSMAMG00000002488	-	99	94.040	ENSFHEG00000000084	msi2a	96	94.040	Fundulus_heteroclitus
ENSMAMG00000002488	-	95	92.308	ENSGMOG00000007596	-	100	92.308	Gadus_morhua
ENSMAMG00000002488	-	99	93.377	ENSGALG00000005567	MSI2	100	93.625	Gallus_gallus
ENSMAMG00000002488	-	99	94.040	ENSGAFG00000006974	msi2a	91	93.421	Gambusia_affinis
ENSMAMG00000002488	-	99	85.526	ENSGAGG00000016542	MSI2	100	82.895	Gopherus_agassizii
ENSMAMG00000002488	-	85	96.154	ENSGGOG00000013182	MSI2	91	94.170	Gorilla_gorilla
ENSMAMG00000002488	-	99	94.040	ENSHBUG00000020800	msi2a	100	94.239	Haplochromis_burtoni
ENSMAMG00000002488	-	95	90.385	ENSHGLG00000012444	MSI2	96	78.209	Heterocephalus_glaber_female
ENSMAMG00000002488	-	75	95.614	ENSHGLG00100004028	-	87	95.614	Heterocephalus_glaber_male
ENSMAMG00000002488	-	71	84.264	ENSHGLG00100003744	MSI2	100	80.193	Heterocephalus_glaber_male
ENSMAMG00000002488	-	99	93.377	ENSHCOG00000000266	msi2a	100	83.816	Hippocampus_comes
ENSMAMG00000002488	-	99	80.132	ENSHCOG00000017241	-	98	79.156	Hippocampus_comes
ENSMAMG00000002488	-	99	94.702	ENSIPUG00000021097	msi2a	100	95.885	Ictalurus_punctatus
ENSMAMG00000002488	-	99	96.689	ENSIPUG00000003732	msi2b	100	88.179	Ictalurus_punctatus
ENSMAMG00000002488	-	88	85.461	ENSSTOG00000007884	MSI2	99	85.461	Ictidomys_tridecemlineatus
ENSMAMG00000002488	-	74	75.879	ENSJJAG00000006292	-	85	94.231	Jaculus_jaculus
ENSMAMG00000002488	-	74	95.575	ENSJJAG00000009467	-	100	95.575	Jaculus_jaculus
ENSMAMG00000002488	-	99	93.377	ENSKMAG00000009494	msi2a	96	94.422	Kryptolebias_marmoratus
ENSMAMG00000002488	-	99	94.074	ENSLBEG00000007061	msi2a	100	90.096	Labrus_bergylta
ENSMAMG00000002488	-	95	78.022	ENSLBEG00000026223	-	100	76.648	Labrus_bergylta
ENSMAMG00000002488	-	86	92.941	ENSLACG00000016798	MSI2	98	91.209	Latimeria_chalumnae
ENSMAMG00000002488	-	99	96.689	ENSLOCG00000004675	msi2b	100	86.179	Lepisosteus_oculatus
ENSMAMG00000002488	-	85	96.154	ENSMFAG00000003775	MSI2	91	94.170	Macaca_fascicularis
ENSMAMG00000002488	-	85	96.154	ENSMMUG00000002069	MSI2	91	94.170	Macaca_mulatta
ENSMAMG00000002488	-	99	92.715	ENSMNEG00000045275	MSI2	97	92.829	Macaca_nemestrina
ENSMAMG00000002488	-	85	96.154	ENSMLEG00000033888	MSI2	91	94.170	Mandrillus_leucophaeus
ENSMAMG00000002488	-	99	94.040	ENSMZEG00005007676	msi2a	98	94.239	Maylandia_zebra
ENSMAMG00000002488	-	99	92.053	ENSMAUG00000003862	Msi2	96	86.607	Mesocricetus_auratus
ENSMAMG00000002488	-	99	92.715	ENSMICG00000013598	-	97	92.829	Microcebus_murinus
ENSMAMG00000002488	-	99	83.444	ENSMICG00000032913	-	95	81.818	Microcebus_murinus
ENSMAMG00000002488	-	99	92.053	ENSMOCG00000005820	Msi2	96	86.866	Microtus_ochrogaster
ENSMAMG00000002488	-	99	84.106	ENSMMOG00000008348	msi2a	90	93.431	Mola_mola
ENSMAMG00000002488	-	71	84.772	ENSMODG00000014790	MSI2	100	94.643	Monodelphis_domestica
ENSMAMG00000002488	-	100	93.464	ENSMALG00000000071	msi2a	100	94.650	Monopterus_albus
ENSMAMG00000002488	-	99	92.053	MGP_CAROLIEiJ_G0016948	Msi2	100	95.575	Mus_caroli
ENSMAMG00000002488	-	99	92.053	ENSMUSG00000069769	Msi2	100	95.575	Mus_musculus
ENSMAMG00000002488	-	99	92.053	MGP_PahariEiJ_G0018079	Msi2	100	95.575	Mus_pahari
ENSMAMG00000002488	-	99	92.053	MGP_SPRETEiJ_G0017795	Msi2	100	95.575	Mus_spretus
ENSMAMG00000002488	-	85	96.154	ENSMPUG00000015377	MSI2	94	94.783	Mustela_putorius_furo
ENSMAMG00000002488	-	85	95.385	ENSMLUG00000007865	MSI2	94	94.348	Myotis_lucifugus
ENSMAMG00000002488	-	99	92.053	ENSNGAG00000017807	Msi2	96	86.866	Nannospalax_galili
ENSMAMG00000002488	-	100	93.464	ENSNBRG00000014596	msi2a	100	89.457	Neolamprologus_brichardi
ENSMAMG00000002488	-	85	95.833	ENSNLEG00000008059	MSI2	95	93.780	Nomascus_leucogenys
ENSMAMG00000002488	-	85	98.361	ENSOPRG00000000872	-	64	84.211	Ochotona_princeps
ENSMAMG00000002488	-	99	92.715	ENSODEG00000011974	MSI2	96	87.164	Octodon_degus
ENSMAMG00000002488	-	99	94.079	ENSONIG00000001972	msi2a	84	94.079	Oreochromis_niloticus
ENSMAMG00000002488	-	97	89.189	ENSOANG00000005667	MSI2	99	74.483	Ornithorhynchus_anatinus
ENSMAMG00000002488	-	85	96.154	ENSOCUG00000010440	MSI2	94	94.783	Oryctolagus_cuniculus
ENSMAMG00000002488	-	99	94.040	ENSORLG00000009671	msi2a	95	94.650	Oryzias_latipes
ENSMAMG00000002488	-	99	94.040	ENSORLG00020021556	msi2a	100	94.650	Oryzias_latipes_hni
ENSMAMG00000002488	-	99	94.040	ENSORLG00015004592	msi2a	95	94.650	Oryzias_latipes_hsok
ENSMAMG00000002488	-	99	94.040	ENSOMEG00000000146	msi2a	100	94.650	Oryzias_melastigma
ENSMAMG00000002488	-	88	85.959	ENSOGAG00000005621	MSI2	96	89.231	Otolemur_garnettii
ENSMAMG00000002488	-	85	96.154	ENSPPAG00000037697	MSI2	91	94.170	Pan_paniscus
ENSMAMG00000002488	-	85	96.154	ENSPPRG00000001848	MSI2	91	94.783	Panthera_pardus
ENSMAMG00000002488	-	85	95.690	ENSPTIG00000021678	MSI2	96	85.161	Panthera_tigris_altaica
ENSMAMG00000002488	-	94	72.222	ENSPTIG00000021873	-	90	76.371	Panthera_tigris_altaica
ENSMAMG00000002488	-	85	96.154	ENSPTRG00000009437	MSI2	91	94.170	Pan_troglodytes
ENSMAMG00000002488	-	99	92.715	ENSPANG00000022319	MSI2	97	92.829	Papio_anubis
ENSMAMG00000002488	-	86	94.505	ENSPKIG00000017107	-	81	94.505	Paramormyrops_kingsleyae
ENSMAMG00000002488	-	99	93.377	ENSPKIG00000007038	-	96	93.004	Paramormyrops_kingsleyae
ENSMAMG00000002488	-	99	95.364	ENSPSIG00000008618	MSI2	100	79.167	Pelodiscus_sinensis
ENSMAMG00000002488	-	95	89.457	ENSPMGG00000005888	msi2a	100	89.457	Periophthalmus_magnuspinnatus
ENSMAMG00000002488	-	74	95.575	ENSPEMG00000021793	-	100	95.575	Peromyscus_maniculatus_bairdii
ENSMAMG00000002488	-	99	95.364	ENSPCIG00000006063	MSI2	98	85.387	Phascolarctos_cinereus
ENSMAMG00000002488	-	95	92.381	ENSPFOG00000019337	MSI2	92	92.381	Poecilia_formosa
ENSMAMG00000002488	-	93	90.210	ENSPLAG00000000436	msi2a	76	90.845	Poecilia_latipinna
ENSMAMG00000002488	-	93	79.720	ENSPMEG00000013247	msi2a	80	89.062	Poecilia_mexicana
ENSMAMG00000002488	-	99	94.040	ENSPREG00000000881	msi2a	96	92.079	Poecilia_reticulata
ENSMAMG00000002488	-	85	98.361	ENSPPYG00000008244	-	100	86.555	Pongo_abelii
ENSMAMG00000002488	-	68	89.231	ENSPCAG00000010552	MSI2	95	89.231	Procavia_capensis
ENSMAMG00000002488	-	85	96.154	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSMAMG00000002488	-	85	95.690	ENSPVAG00000017053	MSI2	99	82.877	Pteropus_vampyrus
ENSMAMG00000002488	-	99	94.040	ENSPNYG00000018393	msi2a	100	94.239	Pundamilia_nyererei
ENSMAMG00000002488	-	99	95.364	ENSPNAG00000014957	msi2a	96	96.414	Pygocentrus_nattereri
ENSMAMG00000002488	-	99	95.364	ENSPNAG00000000844	msi2b	100	91.720	Pygocentrus_nattereri
ENSMAMG00000002488	-	85	95.050	ENSRNOG00000025338	Msi2	97	94.030	Rattus_norvegicus
ENSMAMG00000002488	-	59	71.429	ENSRBIG00000032064	-	84	85.526	Rhinopithecus_bieti
ENSMAMG00000002488	-	85	95.614	ENSRROG00000034421	-	92	95.614	Rhinopithecus_roxellana
ENSMAMG00000002488	-	85	97.872	ENSSBOG00000026425	MSI2	91	94.170	Saimiri_boliviensis_boliviensis
ENSMAMG00000002488	-	85	96.899	ENSSHAG00000008672	MSI2	100	95.633	Sarcophilus_harrisii
ENSMAMG00000002488	-	85	92.308	ENSSFOG00015021687	-	97	92.793	Scleropages_formosus
ENSMAMG00000002488	-	99	75.163	ENSSFOG00015012168	msi2b	100	66.359	Scleropages_formosus
ENSMAMG00000002488	-	99	94.040	ENSSMAG00000018484	msi2a	100	94.650	Scophthalmus_maximus
ENSMAMG00000002488	-	99	98.013	ENSSDUG00000021968	-	99	98.013	Seriola_dumerili
ENSMAMG00000002488	-	99	94.040	ENSSDUG00000014507	msi2a	100	94.650	Seriola_dumerili
ENSMAMG00000002488	-	59	84.615	ENSSLDG00000021332	-	68	84.615	Seriola_lalandi_dorsalis
ENSMAMG00000002488	-	99	94.040	ENSSLDG00000017172	msi2a	100	90.096	Seriola_lalandi_dorsalis
ENSMAMG00000002488	-	99	94.702	ENSSPUG00000000913	-	94	94.702	Sphenodon_punctatus
ENSMAMG00000002488	-	99	94.040	ENSSPAG00000017793	msi2a	98	94.650	Stegastes_partitus
ENSMAMG00000002488	-	99	92.715	ENSSSCG00000038505	MSI2	98	93.004	Sus_scrofa
ENSMAMG00000002488	-	71	85.279	ENSTGUG00000008452	MSI2	100	94.643	Taeniopygia_guttata
ENSMAMG00000002488	-	99	94.040	ENSTRUG00000021248	msi2a	97	87.597	Takifugu_rubripes
ENSMAMG00000002488	-	88	77.037	ENSTBEG00000001241	MSI2	73	77.686	Tupaia_belangeri
ENSMAMG00000002488	-	85	98.361	ENSTTRG00000002189	MSI2	91	95.395	Tursiops_truncatus
ENSMAMG00000002488	-	85	96.154	ENSUAMG00000000700	MSI2	96	95.045	Ursus_americanus
ENSMAMG00000002488	-	85	95.050	ENSUMAG00000000505	MSI2	97	94.301	Ursus_maritimus
ENSMAMG00000002488	-	85	95.690	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSMAMG00000002488	-	99	95.614	ENSVVUG00000011783	MSI2	97	93.750	Vulpes_vulpes
ENSMAMG00000002488	-	99	92.053	ENSXCOG00000006113	msi2a	100	81.643	Xiphophorus_couchianus
ENSMAMG00000002488	-	99	94.040	ENSXMAG00000000608	msi2a	100	94.650	Xiphophorus_maculatus