EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000002536 (Gene tree)
Gene ID: 113141254
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: si:ch211-11k18.4
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4809 bases
Position: chrOOHQ01000092.1:18947634-18952442
Accession: ZDB-GENE-070912-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000003791	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSMAMP00000003754	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000003839	-	2332	-	ENSMAMP00000003754	435 (aa)	-	-
ENSMAMT00000003877	-	1239	-	ENSMAMP00000003791	412 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000002536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000002536	si:ch211-11k18.4	99	60.369	ENSMAMG00000014528	si:dkey-98f17.5	96	60.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002536	si:ch211-11k18.4	99	60.599	ENSAPOG00000010378	si:dkey-98f17.5	96	60.599	Acanthochromis_polyacanthus
ENSMAMG00000002536	si:ch211-11k18.4	99	92.130	ENSAPOG00000018833	si:ch211-11k18.4	96	92.130	Acanthochromis_polyacanthus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.508	ENSACIG00000017719	si:dkey-98f17.5	96	60.508	Amphilophus_citrinellus
ENSMAMG00000002536	si:ch211-11k18.4	97	87.294	ENSACIG00000006696	si:ch211-11k18.4	96	87.298	Amphilophus_citrinellus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.739	ENSAOCG00000008661	si:dkey-98f17.5	96	60.739	Amphiprion_ocellaris
ENSMAMG00000002536	si:ch211-11k18.4	99	92.593	ENSAOCG00000014284	si:ch211-11k18.4	96	92.593	Amphiprion_ocellaris
ENSMAMG00000002536	si:ch211-11k18.4	99	60.739	ENSAPEG00000022447	si:dkey-98f17.5	96	60.739	Amphiprion_percula
ENSMAMG00000002536	si:ch211-11k18.4	99	92.379	ENSAPEG00000014910	si:ch211-11k18.4	96	92.379	Amphiprion_percula
ENSMAMG00000002536	si:ch211-11k18.4	99	61.060	ENSATEG00000007188	si:dkey-98f17.5	96	61.060	Anabas_testudineus
ENSMAMG00000002536	si:ch211-11k18.4	99	90.741	ENSATEG00000004775	si:ch211-11k18.4	96	90.741	Anabas_testudineus
ENSMAMG00000002536	si:ch211-11k18.4	98	66.200	ENSACAG00000028632	-	94	66.200	Anolis_carolinensis
ENSMAMG00000002536	si:ch211-11k18.4	99	91.204	ENSACLG00000007907	si:ch211-11k18.4	96	91.204	Astatotilapia_calliptera
ENSMAMG00000002536	si:ch211-11k18.4	99	60.739	ENSACLG00000001308	si:dkey-98f17.5	96	60.739	Astatotilapia_calliptera
ENSMAMG00000002536	si:ch211-11k18.4	99	60.508	ENSAMXG00000001190	si:dkey-98f17.5	96	60.508	Astyanax_mexicanus
ENSMAMG00000002536	si:ch211-11k18.4	99	83.565	ENSAMXG00000017817	si:ch211-11k18.4	96	83.565	Astyanax_mexicanus
ENSMAMG00000002536	si:ch211-11k18.4	92	61.719	ENSCING00000020807	-	99	61.719	Ciona_intestinalis
ENSMAMG00000002536	si:ch211-11k18.4	100	58.716	ENSCSAVG00000009987	-	97	58.716	Ciona_savignyi
ENSMAMG00000002536	si:ch211-11k18.4	99	85.417	ENSCSEG00000017661	si:ch211-11k18.4	96	85.417	Cynoglossus_semilaevis
ENSMAMG00000002536	si:ch211-11k18.4	99	61.201	ENSCSEG00000017512	si:dkey-98f17.5	91	62.850	Cynoglossus_semilaevis
ENSMAMG00000002536	si:ch211-11k18.4	99	90.069	ENSCVAG00000015346	si:ch211-11k18.4	96	90.046	Cyprinodon_variegatus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.369	ENSCVAG00000011351	si:dkey-98f17.5	96	60.508	Cyprinodon_variegatus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.046	ENSDARG00000068863	si:dkey-98f17.5	98	60.046	Danio_rerio
ENSMAMG00000002536	si:ch211-11k18.4	99	84.259	ENSDARG00000087869	si:ch211-11k18.4	100	91.327	Danio_rerio
ENSMAMG00000002536	si:ch211-11k18.4	87	57.341	ENSEBUG00000007620	si:dkey-98f17.5	95	58.543	Eptatretus_burgeri
ENSMAMG00000002536	si:ch211-11k18.4	99	61.060	ENSELUG00000003365	si:dkey-98f17.5	91	66.276	Esox_lucius
ENSMAMG00000002536	si:ch211-11k18.4	99	88.657	ENSFHEG00000019820	si:ch211-11k18.4	96	88.657	Fundulus_heteroclitus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.138	ENSFHEG00000012744	si:dkey-98f17.5	96	60.138	Fundulus_heteroclitus
ENSMAMG00000002536	si:ch211-11k18.4	93	78.465	ENSGMOG00000003492	si:ch211-11k18.4	100	78.465	Gadus_morhua
ENSMAMG00000002536	si:ch211-11k18.4	99	87.500	ENSGAFG00000005677	si:ch211-11k18.4	96	87.500	Gambusia_affinis
ENSMAMG00000002536	si:ch211-11k18.4	99	59.908	ENSGAFG00000012362	si:dkey-98f17.5	86	60.046	Gambusia_affinis
ENSMAMG00000002536	si:ch211-11k18.4	63	73.462	ENSGACG00000009399	si:dkey-98f17.5	100	73.462	Gasterosteus_aculeatus
ENSMAMG00000002536	si:ch211-11k18.4	93	90.594	ENSGACG00000013134	si:ch211-11k18.4	100	90.594	Gasterosteus_aculeatus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.970	ENSHBUG00000008331	si:dkey-98f17.5	96	60.970	Haplochromis_burtoni
ENSMAMG00000002536	si:ch211-11k18.4	99	91.204	ENSHBUG00000020638	si:ch211-11k18.4	96	91.204	Haplochromis_burtoni
ENSMAMG00000002536	si:ch211-11k18.4	99	89.352	ENSHCOG00000014773	si:ch211-11k18.4	96	89.352	Hippocampus_comes
ENSMAMG00000002536	si:ch211-11k18.4	91	61.965	ENSHCOG00000016505	si:dkey-98f17.5	79	68.182	Hippocampus_comes
ENSMAMG00000002536	si:ch211-11k18.4	99	82.195	ENSIPUG00000016678	si:ch211-11k18.4	99	82.195	Ictalurus_punctatus
ENSMAMG00000002536	si:ch211-11k18.4	93	69.059	ENSIPUG00000016694	si:ch211-11k18.4	84	70.942	Ictalurus_punctatus
ENSMAMG00000002536	si:ch211-11k18.4	97	58.353	ENSIPUG00000019981	si:dkey-98f17.5	96	58.295	Ictalurus_punctatus
ENSMAMG00000002536	si:ch211-11k18.4	99	88.889	ENSKMAG00000009327	si:ch211-11k18.4	96	88.889	Kryptolebias_marmoratus
ENSMAMG00000002536	si:ch211-11k18.4	99	59.217	ENSKMAG00000014997	si:dkey-98f17.5	96	59.217	Kryptolebias_marmoratus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.508	ENSLBEG00000012756	si:dkey-98f17.5	96	60.508	Labrus_bergylta
ENSMAMG00000002536	si:ch211-11k18.4	99	71.132	ENSLACG00000006280	si:ch211-11k18.4	96	71.132	Latimeria_chalumnae
ENSMAMG00000002536	si:ch211-11k18.4	99	63.048	ENSLACG00000004899	-	96	63.048	Latimeria_chalumnae
ENSMAMG00000002536	si:ch211-11k18.4	98	60.656	ENSLACG00000017433	si:dkey-98f17.5	94	60.656	Latimeria_chalumnae
ENSMAMG00000002536	si:ch211-11k18.4	99	59.770	ENSLOCG00000003824	si:dkey-98f17.5	96	59.770	Lepisosteus_oculatus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.970	ENSMZEG00005016572	si:dkey-98f17.5	96	60.970	Maylandia_zebra
ENSMAMG00000002536	si:ch211-11k18.4	99	90.972	ENSMZEG00005008941	si:ch211-11k18.4	96	90.972	Maylandia_zebra
ENSMAMG00000002536	si:ch211-11k18.4	99	83.333	ENSMMOG00000012485	si:ch211-11k18.4	96	83.333	Mola_mola
ENSMAMG00000002536	si:ch211-11k18.4	99	88.426	ENSMALG00000019735	si:ch211-11k18.4	96	88.426	Monopterus_albus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.417	ENSMALG00000012761	si:dkey-98f17.5	98	60.880	Monopterus_albus
ENSMAMG00000002536	si:ch211-11k18.4	99	61.111	ENSNBRG00000006068	si:dkey-98f17.5	96	61.111	Neolamprologus_brichardi
ENSMAMG00000002536	si:ch211-11k18.4	99	90.531	ENSNBRG00000002220	si:ch211-11k18.4	99	90.531	Neolamprologus_brichardi
ENSMAMG00000002536	si:ch211-11k18.4	99	61.201	ENSONIG00000013568	si:dkey-98f17.5	96	61.201	Oreochromis_niloticus
ENSMAMG00000002536	si:ch211-11k18.4	99	90.741	ENSONIG00000019412	si:ch211-11k18.4	96	90.741	Oreochromis_niloticus
ENSMAMG00000002536	si:ch211-11k18.4	90	61.069	ENSORLG00000007958	si:dkey-98f17.5	91	61.069	Oryzias_latipes
ENSMAMG00000002536	si:ch211-11k18.4	99	87.731	ENSORLG00000012015	si:ch211-11k18.4	96	87.731	Oryzias_latipes
ENSMAMG00000002536	si:ch211-11k18.4	99	87.269	ENSORLG00020012386	si:ch211-11k18.4	96	87.269	Oryzias_latipes_hni
ENSMAMG00000002536	si:ch211-11k18.4	99	59.584	ENSORLG00020013350	si:dkey-98f17.5	96	59.584	Oryzias_latipes_hni
ENSMAMG00000002536	si:ch211-11k18.4	99	59.584	ENSORLG00015002000	si:dkey-98f17.5	96	59.584	Oryzias_latipes_hsok
ENSMAMG00000002536	si:ch211-11k18.4	99	87.731	ENSORLG00015022862	si:ch211-11k18.4	96	87.731	Oryzias_latipes_hsok
ENSMAMG00000002536	si:ch211-11k18.4	99	59.677	ENSOMEG00000003154	si:dkey-98f17.5	99	59.677	Oryzias_melastigma
ENSMAMG00000002536	si:ch211-11k18.4	99	87.731	ENSOMEG00000018686	si:ch211-11k18.4	96	87.731	Oryzias_melastigma
ENSMAMG00000002536	si:ch211-11k18.4	99	61.290	ENSPKIG00000024621	si:dkey-98f17.5	96	61.290	Paramormyrops_kingsleyae
ENSMAMG00000002536	si:ch211-11k18.4	99	80.556	ENSPKIG00000018807	si:ch211-11k18.4	96	80.556	Paramormyrops_kingsleyae
ENSMAMG00000002536	si:ch211-11k18.4	99	78.009	ENSPKIG00000023918	-	95	78.009	Paramormyrops_kingsleyae
ENSMAMG00000002536	si:ch211-11k18.4	99	60.739	ENSPMGG00000019065	si:dkey-98f17.5	96	60.739	Periophthalmus_magnuspinnatus
ENSMAMG00000002536	si:ch211-11k18.4	99	89.120	ENSPMGG00000016507	si:ch211-11k18.4	96	89.120	Periophthalmus_magnuspinnatus
ENSMAMG00000002536	si:ch211-11k18.4	99	88.889	ENSPFOG00000007976	si:ch211-11k18.4	96	88.889	Poecilia_formosa
ENSMAMG00000002536	si:ch211-11k18.4	99	59.725	ENSPFOG00000015142	si:dkey-98f17.5	96	59.862	Poecilia_formosa
ENSMAMG00000002536	si:ch211-11k18.4	99	60.138	ENSPLAG00000003709	si:dkey-98f17.5	96	60.277	Poecilia_latipinna
ENSMAMG00000002536	si:ch211-11k18.4	99	88.889	ENSPLAG00000019794	si:ch211-11k18.4	96	88.889	Poecilia_latipinna
ENSMAMG00000002536	si:ch211-11k18.4	99	88.915	ENSPMEG00000024198	si:ch211-11k18.4	99	88.915	Poecilia_mexicana
ENSMAMG00000002536	si:ch211-11k18.4	99	60.277	ENSPMEG00000018709	si:dkey-98f17.5	91	60.277	Poecilia_mexicana
ENSMAMG00000002536	si:ch211-11k18.4	96	83.529	ENSPREG00000015319	si:ch211-11k18.4	97	83.529	Poecilia_reticulata
ENSMAMG00000002536	si:ch211-11k18.4	99	61.111	ENSPREG00000000708	si:dkey-98f17.5	98	61.111	Poecilia_reticulata
ENSMAMG00000002536	si:ch211-11k18.4	99	60.970	ENSPNYG00000017266	si:dkey-98f17.5	96	60.970	Pundamilia_nyererei
ENSMAMG00000002536	si:ch211-11k18.4	99	91.204	ENSPNYG00000017099	si:ch211-11k18.4	96	91.204	Pundamilia_nyererei
ENSMAMG00000002536	si:ch211-11k18.4	99	59.815	ENSPNAG00000021352	si:dkey-98f17.5	96	59.815	Pygocentrus_nattereri
ENSMAMG00000002536	si:ch211-11k18.4	99	84.028	ENSPNAG00000022138	si:ch211-11k18.4	96	84.028	Pygocentrus_nattereri
ENSMAMG00000002536	si:ch211-11k18.4	99	78.009	ENSSFOG00015000985	si:ch211-11k18.4	91	78.009	Scleropages_formosus
ENSMAMG00000002536	si:ch211-11k18.4	99	59.268	ENSSFOG00015017965	si:dkey-98f17.5	96	59.268	Scleropages_formosus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.369	ENSSMAG00000011905	si:dkey-98f17.5	98	60.369	Scophthalmus_maximus
ENSMAMG00000002536	si:ch211-11k18.4	99	91.204	ENSSMAG00000009651	si:ch211-11k18.4	96	91.204	Scophthalmus_maximus
ENSMAMG00000002536	si:ch211-11k18.4	99	92.361	ENSSDUG00000016411	si:ch211-11k18.4	96	92.361	Seriola_dumerili
ENSMAMG00000002536	si:ch211-11k18.4	98	60.047	ENSSDUG00000013457	si:dkey-98f17.5	95	60.047	Seriola_dumerili
ENSMAMG00000002536	si:ch211-11k18.4	99	92.130	ENSSLDG00000019145	si:ch211-11k18.4	96	92.130	Seriola_lalandi_dorsalis
ENSMAMG00000002536	si:ch211-11k18.4	98	59.813	ENSSLDG00000025395	si:dkey-98f17.5	95	59.813	Seriola_lalandi_dorsalis
ENSMAMG00000002536	si:ch211-11k18.4	86	67.905	ENSSPUG00000010096	-	95	67.905	Sphenodon_punctatus
ENSMAMG00000002536	si:ch211-11k18.4	99	91.667	ENSSPAG00000010697	si:ch211-11k18.4	96	91.667	Stegastes_partitus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.739	ENSSPAG00000018800	si:dkey-98f17.5	96	60.739	Stegastes_partitus
ENSMAMG00000002536	si:ch211-11k18.4	99	87.963	ENSTRUG00000020291	si:ch211-11k18.4	96	87.963	Takifugu_rubripes
ENSMAMG00000002536	si:ch211-11k18.4	99	59.908	ENSTRUG00000021287	si:dkey-98f17.5	96	60.046	Takifugu_rubripes
ENSMAMG00000002536	si:ch211-11k18.4	99	67.586	ENSXETG00000031783	-	96	67.586	Xenopus_tropicalis
ENSMAMG00000002536	si:ch211-11k18.4	99	83.796	ENSXCOG00000018094	si:ch211-11k18.4	96	83.141	Xiphophorus_couchianus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.739	ENSXCOG00000017002	si:dkey-98f17.5	96	60.739	Xiphophorus_couchianus
ENSMAMG00000002536	si:ch211-11k18.4	99	60.046	ENSXMAG00000007688	si:dkey-98f17.5	91	60.046	Xiphophorus_maculatus
ENSMAMG00000002536	si:ch211-11k18.4	99	89.120	ENSXMAG00000021235	si:ch211-11k18.4	96	89.120	Xiphophorus_maculatus