EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000002627 (Gene tree)
Gene ID: 113138545
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: heterogeneous nuclear ribonucleoprotein H-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4650 bases
Position: chrOOHQ01000039.1:17795902-17800551
Accession: 113138545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000003858	RRM_1	PF00076.22	4.9e-26	1	2
ENSMAMP00000003858	RRM_1	PF00076.22	4.9e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000003948	-	2696	-	ENSMAMP00000003858	395 (aa)	XP_026176866	UPI000E45CCB3

Gene Model

Click here to download ENSMAMG00000002627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000002627	grsf1	78	40.517	ENSMAMG00000011478	hnrnph1	93	40.517
ENSMAMG00000002627	grsf1	78	58.974	ENSMAMG00000020155	hnrnph3	69	58.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002627	grsf1	99	66.667	ENSAPOG00000012487	grsf1	98	66.667	Acanthochromis_polyacanthus
ENSMAMG00000002627	grsf1	99	66.250	ENSACIG00000005871	grsf1	98	67.830	Amphilophus_citrinellus
ENSMAMG00000002627	grsf1	99	67.241	ENSAOCG00000017462	-	98	67.241	Amphiprion_ocellaris
ENSMAMG00000002627	grsf1	99	67.241	ENSAPEG00000007240	-	98	67.241	Amphiprion_percula
ENSMAMG00000002627	grsf1	100	67.407	ENSATEG00000007185	grsf1	99	67.407	Anabas_testudineus
ENSMAMG00000002627	grsf1	99	68.657	ENSACLG00000003685	-	99	68.657	Astatotilapia_calliptera
ENSMAMG00000002627	grsf1	99	50.932	ENSAMXG00000012270	grsf1	99	50.932	Astyanax_mexicanus
ENSMAMG00000002627	grsf1	99	62.195	ENSCSEG00000019209	-	99	63.110	Cynoglossus_semilaevis
ENSMAMG00000002627	grsf1	99	60.750	ENSCVAG00000004476	grsf1	99	60.750	Cyprinodon_variegatus
ENSMAMG00000002627	grsf1	94	48.800	ENSDARG00000053021	grsf1	86	48.800	Danio_rerio
ENSMAMG00000002627	grsf1	99	49.754	ENSFHEG00000013358	-	98	50.739	Fundulus_heteroclitus
ENSMAMG00000002627	grsf1	77	69.091	ENSGMOG00000014047	grsf1	82	69.091	Gadus_morhua
ENSMAMG00000002627	grsf1	99	62.750	ENSGAFG00000004496	grsf1	99	62.750	Gambusia_affinis
ENSMAMG00000002627	grsf1	77	65.123	ENSGACG00000014447	grsf1	96	65.123	Gasterosteus_aculeatus
ENSMAMG00000002627	grsf1	99	68.408	ENSHBUG00000006284	grsf1	99	68.408	Haplochromis_burtoni
ENSMAMG00000002627	grsf1	99	55.446	ENSHCOG00000007715	-	99	55.446	Hippocampus_comes
ENSMAMG00000002627	grsf1	81	56.037	ENSIPUG00000010533	grsf1	79	56.037	Ictalurus_punctatus
ENSMAMG00000002627	grsf1	99	57.279	ENSKMAG00000004528	grsf1	99	57.279	Kryptolebias_marmoratus
ENSMAMG00000002627	grsf1	78	57.895	ENSLBEG00000018100	grsf1	94	57.895	Labrus_bergylta
ENSMAMG00000002627	grsf1	99	68.657	ENSMZEG00005020633	-	99	68.657	Maylandia_zebra
ENSMAMG00000002627	grsf1	95	66.223	ENSMMOG00000014231	grsf1	99	65.979	Mola_mola
ENSMAMG00000002627	grsf1	99	67.990	ENSMALG00000000251	grsf1	99	67.990	Monopterus_albus
ENSMAMG00000002627	grsf1	99	67.662	ENSNBRG00000017774	grsf1	96	67.662	Neolamprologus_brichardi
ENSMAMG00000002627	grsf1	99	69.576	ENSONIG00000014119	grsf1	99	69.576	Oreochromis_niloticus
ENSMAMG00000002627	grsf1	98	60.406	ENSORLG00000030211	grsf1	98	60.406	Oryzias_latipes
ENSMAMG00000002627	grsf1	98	60.152	ENSORLG00020014383	grsf1	98	60.152	Oryzias_latipes_hni
ENSMAMG00000002627	grsf1	98	60.406	ENSORLG00015006520	grsf1	98	60.406	Oryzias_latipes_hsok
ENSMAMG00000002627	grsf1	84	67.879	ENSOMEG00000009181	grsf1	99	61.307	Oryzias_melastigma
ENSMAMG00000002627	grsf1	84	53.293	ENSPKIG00000019432	grsf1	79	53.293	Paramormyrops_kingsleyae
ENSMAMG00000002627	grsf1	83	63.235	ENSPMGG00000013654	grsf1	92	63.235	Periophthalmus_magnuspinnatus
ENSMAMG00000002627	grsf1	99	62.255	ENSPFOG00000006122	grsf1	99	63.524	Poecilia_formosa
ENSMAMG00000002627	grsf1	99	63.366	ENSPLAG00000020977	grsf1	99	63.861	Poecilia_latipinna
ENSMAMG00000002627	grsf1	99	63.524	ENSPMEG00000012485	grsf1	99	63.725	Poecilia_mexicana
ENSMAMG00000002627	grsf1	99	62.095	ENSPREG00000013383	grsf1	99	62.654	Poecilia_reticulata
ENSMAMG00000002627	grsf1	99	68.473	ENSPNYG00000005379	grsf1	99	68.473	Pundamilia_nyererei
ENSMAMG00000002627	grsf1	85	56.932	ENSPNAG00000014912	grsf1	81	56.932	Pygocentrus_nattereri
ENSMAMG00000002627	grsf1	83	46.084	ENSSFOG00015014620	grsf1	83	46.084	Scleropages_formosus
ENSMAMG00000002627	grsf1	99	67.081	ENSSMAG00000014181	grsf1	89	67.081	Scophthalmus_maximus
ENSMAMG00000002627	grsf1	99	66.500	ENSSDUG00000009397	-	97	72.256	Seriola_dumerili
ENSMAMG00000002627	grsf1	99	65.664	ENSSLDG00000025494	grsf1	99	65.664	Seriola_lalandi_dorsalis
ENSMAMG00000002627	grsf1	99	62.222	ENSSPAG00000023296	grsf1	98	62.222	Stegastes_partitus
ENSMAMG00000002627	grsf1	96	61.240	ENSTRUG00000015354	grsf1	99	60.902	Takifugu_rubripes
ENSMAMG00000002627	grsf1	84	61.562	ENSTNIG00000015350	-	100	63.125	Tetraodon_nigroviridis
ENSMAMG00000002627	grsf1	99	61.750	ENSXMAG00000029710	grsf1	99	61.750	Xiphophorus_maculatus