EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000002841 (Gene tree)
Gene ID: 113128267
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 19405 bases
Position: chrOOHQ01000044.1:24725762-24745166
Accession: 113128267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000004371	ResIII	PF04851.15	1.6e-08	1	1
ENSMAMP00000004334	ResIII	PF04851.15	1.8e-08	1	1
ENSMAMP00000004371	BRK	PF07533.16	6e-16	1	1
ENSMAMP00000004334	BRK	PF07533.16	6.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000004478	-	4629	-	ENSMAMP00000004371	1542 (aa)	-	-
ENSMAMT00000004438	-	5193	XM_026303473	ENSMAMP00000004334	1671 (aa)	XP_026159255	UPI000E4613E5

Gene Model

Click here to download ENSMAMG00000002841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000002841	-	98	88.158	ENSMAMG00000009256	smarca4a	98	88.796
ENSMAMG00000002841	-	98	72.909	ENSMAMG00000003056	SMARCA2	95	70.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002841	-	98	86.931	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSMAMG00000002841	-	97	97.102	ENSAPOG00000004542	SMARCA4	99	97.102	Acanthochromis_polyacanthus
ENSMAMG00000002841	-	76	88.898	ENSAPOG00000003509	smarca4a	98	86.512	Acanthochromis_polyacanthus
ENSMAMG00000002841	-	98	83.583	ENSAMEG00000010868	SMARCA4	99	80.338	Ailuropoda_melanoleuca
ENSMAMG00000002841	-	99	94.083	ENSACIG00000003035	-	99	94.798	Amphilophus_citrinellus
ENSMAMG00000002841	-	98	87.041	ENSACIG00000021550	smarca4a	98	84.453	Amphilophus_citrinellus
ENSMAMG00000002841	-	90	82.212	ENSAOCG00000019167	smarca4a	100	84.983	Amphiprion_ocellaris
ENSMAMG00000002841	-	97	97.671	ENSAOCG00000009450	-	97	97.671	Amphiprion_ocellaris
ENSMAMG00000002841	-	90	82.278	ENSAPEG00000015559	smarca4a	100	85.052	Amphiprion_percula
ENSMAMG00000002841	-	100	97.143	ENSAPEG00000023108	-	100	97.143	Amphiprion_percula
ENSMAMG00000002841	-	99	95.731	ENSATEG00000001094	-	98	95.731	Anabas_testudineus
ENSMAMG00000002841	-	98	86.577	ENSATEG00000011524	smarca4a	99	84.360	Anabas_testudineus
ENSMAMG00000002841	-	98	86.753	ENSANAG00000036991	SMARCA4	99	80.070	Aotus_nancymaae
ENSMAMG00000002841	-	97	96.592	ENSACLG00000008638	-	99	96.592	Astatotilapia_calliptera
ENSMAMG00000002841	-	98	88.393	ENSACLG00000000163	smarca4a	94	88.255	Astatotilapia_calliptera
ENSMAMG00000002841	-	98	82.657	ENSAMXG00000021023	smarca4a	96	84.010	Astyanax_mexicanus
ENSMAMG00000002841	-	97	89.311	ENSAMXG00000011238	-	99	90.156	Astyanax_mexicanus
ENSMAMG00000002841	-	98	87.280	ENSBTAG00000019220	SMARCA4	95	87.059	Bos_taurus
ENSMAMG00000002841	-	95	90.021	ENSCJAG00000005936	SMARCA4	94	87.062	Callithrix_jacchus
ENSMAMG00000002841	-	98	87.126	ENSCAFG00000017584	SMARCA4	95	86.971	Canis_familiaris
ENSMAMG00000002841	-	98	87.126	ENSCAFG00020024620	SMARCA4	96	85.452	Canis_lupus_dingo
ENSMAMG00000002841	-	98	83.388	ENSCHIG00000015318	SMARCA4	99	79.265	Capra_hircus
ENSMAMG00000002841	-	98	87.084	ENSTSYG00000012966	SMARCA4	99	83.172	Carlito_syrichta
ENSMAMG00000002841	-	97	81.546	ENSCAPG00000015932	SMARCA4	94	89.948	Cavia_aperea
ENSMAMG00000002841	-	98	87.305	ENSCPOG00000015549	SMARCA4	95	87.166	Cavia_porcellus
ENSMAMG00000002841	-	98	84.710	ENSCCAG00000031660	SMARCA4	98	80.000	Cebus_capucinus
ENSMAMG00000002841	-	98	86.931	ENSCATG00000029530	SMARCA4	95	86.840	Cercocebus_atys
ENSMAMG00000002841	-	98	87.394	ENSCLAG00000011946	SMARCA4	99	83.534	Chinchilla_lanigera
ENSMAMG00000002841	-	98	86.849	ENSCPBG00000009994	SMARCA4	99	82.972	Chrysemys_picta_bellii
ENSMAMG00000002841	-	98	86.931	ENSCANG00000036013	SMARCA4	95	86.840	Colobus_angolensis_palliatus
ENSMAMG00000002841	-	98	86.801	ENSCGRG00001016732	Smarca4	99	82.862	Cricetulus_griseus_chok1gshd
ENSMAMG00000002841	-	98	86.801	ENSCGRG00000017242	Smarca4	99	82.862	Cricetulus_griseus_crigri
ENSMAMG00000002841	-	94	85.983	ENSCSEG00000014771	smarca4a	100	83.094	Cynoglossus_semilaevis
ENSMAMG00000002841	-	97	95.875	ENSCVAG00000003018	-	96	95.542	Cyprinodon_variegatus
ENSMAMG00000002841	-	98	86.176	ENSCVAG00000006979	smarca4a	99	82.981	Cyprinodon_variegatus
ENSMAMG00000002841	-	98	87.637	ENSDARG00000077226	smarca4a	99	84.876	Danio_rerio
ENSMAMG00000002841	-	95	85.772	ENSDARG00000104339	SMARCA4	95	85.026	Danio_rerio
ENSMAMG00000002841	-	98	78.541	ENSDNOG00000048847	SMARCA4	90	90.683	Dasypus_novemcinctus
ENSMAMG00000002841	-	88	81.232	ENSDORG00000002544	Smarca4	91	81.738	Dipodomys_ordii
ENSMAMG00000002841	-	97	75.679	ENSETEG00000013361	SMARCA4	94	74.951	Echinops_telfairi
ENSMAMG00000002841	-	98	86.866	ENSEASG00005006167	SMARCA4	93	86.710	Equus_asinus_asinus
ENSMAMG00000002841	-	98	86.931	ENSECAG00000008334	SMARCA4	95	86.775	Equus_caballus
ENSMAMG00000002841	-	98	83.608	ENSELUG00000023232	-	98	84.680	Esox_lucius
ENSMAMG00000002841	-	98	85.519	ENSELUG00000010247	smarca4a	99	82.861	Esox_lucius
ENSMAMG00000002841	-	98	87.021	ENSFCAG00000004894	SMARCA4	95	86.866	Felis_catus
ENSMAMG00000002841	-	77	91.206	ENSFALG00000004208	SMARCA4	95	83.990	Ficedula_albicollis
ENSMAMG00000002841	-	95	86.851	ENSFDAG00000012237	SMARCA4	97	86.572	Fukomys_damarensis
ENSMAMG00000002841	-	94	84.871	ENSFHEG00000010182	smarca4a	99	82.395	Fundulus_heteroclitus
ENSMAMG00000002841	-	100	94.448	ENSFHEG00000007902	-	100	94.388	Fundulus_heteroclitus
ENSMAMG00000002841	-	92	86.618	ENSGMOG00000005756	-	93	84.708	Gadus_morhua
ENSMAMG00000002841	-	91	84.146	ENSGMOG00000002649	smarca4a	88	85.433	Gadus_morhua
ENSMAMG00000002841	-	75	85.690	ENSGALG00000047145	SMARCA4	100	84.915	Gallus_gallus
ENSMAMG00000002841	-	88	88.621	ENSGAFG00000014900	smarca4a	96	87.074	Gambusia_affinis
ENSMAMG00000002841	-	98	89.567	ENSGAFG00000008827	-	98	85.835	Gambusia_affinis
ENSMAMG00000002841	-	98	88.442	ENSGACG00000016033	-	100	86.265	Gasterosteus_aculeatus
ENSMAMG00000002841	-	94	85.552	ENSGACG00000006691	smarca4a	99	81.785	Gasterosteus_aculeatus
ENSMAMG00000002841	-	98	87.084	ENSGAGG00000016757	SMARCA4	99	83.183	Gopherus_agassizii
ENSMAMG00000002841	-	98	86.931	ENSGGOG00000009882	SMARCA4	95	86.840	Gorilla_gorilla
ENSMAMG00000002841	-	100	95.931	ENSHBUG00000005447	-	100	95.931	Haplochromis_burtoni
ENSMAMG00000002841	-	98	88.459	ENSHBUG00000021172	smarca4a	99	84.499	Haplochromis_burtoni
ENSMAMG00000002841	-	98	86.779	ENSHGLG00000010519	SMARCA4	95	86.641	Heterocephalus_glaber_female
ENSMAMG00000002841	-	98	86.606	ENSHGLG00100013774	SMARCA4	95	86.346	Heterocephalus_glaber_male
ENSMAMG00000002841	-	98	86.367	ENSHCOG00000009510	smarca4a	84	89.547	Hippocampus_comes
ENSMAMG00000002841	-	98	86.985	ENSIPUG00000006107	smarca4a	99	84.322	Ictalurus_punctatus
ENSMAMG00000002841	-	96	88.704	ENSIPUG00000016346	-	95	86.425	Ictalurus_punctatus
ENSMAMG00000002841	-	98	87.191	ENSSTOG00000007939	SMARCA4	95	87.036	Ictidomys_tridecemlineatus
ENSMAMG00000002841	-	98	85.041	ENSJJAG00000012877	Smarca4	99	82.018	Jaculus_jaculus
ENSMAMG00000002841	-	99	95.850	ENSKMAG00000019518	-	99	95.850	Kryptolebias_marmoratus
ENSMAMG00000002841	-	98	87.368	ENSKMAG00000011931	smarca4a	95	87.937	Kryptolebias_marmoratus
ENSMAMG00000002841	-	98	84.886	ENSLBEG00000017383	smarca4a	97	83.431	Labrus_bergylta
ENSMAMG00000002841	-	94	92.334	ENSLBEG00000020655	-	94	93.428	Labrus_bergylta
ENSMAMG00000002841	-	53	81.227	ENSLACG00000015309	SMARCA4	100	80.626	Latimeria_chalumnae
ENSMAMG00000002841	-	98	85.072	ENSLOCG00000007820	smarca4a	95	83.312	Lepisosteus_oculatus
ENSMAMG00000002841	-	98	86.957	ENSLAFG00000001433	SMARCA4	95	86.801	Loxodonta_africana
ENSMAMG00000002841	-	98	86.931	ENSMFAG00000032146	SMARCA4	94	86.840	Macaca_fascicularis
ENSMAMG00000002841	-	98	86.931	ENSMMUG00000012042	SMARCA4	97	89.057	Macaca_mulatta
ENSMAMG00000002841	-	98	86.914	ENSMNEG00000028512	SMARCA4	95	86.758	Macaca_nemestrina
ENSMAMG00000002841	-	98	86.931	ENSMLEG00000034976	SMARCA4	95	86.671	Mandrillus_leucophaeus
ENSMAMG00000002841	-	98	88.386	ENSMZEG00005003889	smarca4a	99	84.369	Maylandia_zebra
ENSMAMG00000002841	-	97	96.460	ENSMZEG00005023861	-	99	96.035	Maylandia_zebra
ENSMAMG00000002841	-	98	86.697	ENSMAUG00000020731	Smarca4	99	82.773	Mesocricetus_auratus
ENSMAMG00000002841	-	98	86.957	ENSMICG00000009806	SMARCA4	95	86.801	Microcebus_murinus
ENSMAMG00000002841	-	98	86.372	ENSMOCG00000022209	Smarca4	99	82.593	Microtus_ochrogaster
ENSMAMG00000002841	-	98	90.369	ENSMMOG00000008466	-	98	90.299	Mola_mola
ENSMAMG00000002841	-	98	84.794	ENSMMOG00000007571	smarca4a	98	83.229	Mola_mola
ENSMAMG00000002841	-	98	85.405	ENSMODG00000006287	SMARCA4	99	82.640	Monodelphis_domestica
ENSMAMG00000002841	-	94	88.103	ENSMALG00000003388	smarca4a	94	87.688	Monopterus_albus
ENSMAMG00000002841	-	92	91.760	ENSMALG00000021534	-	99	92.388	Monopterus_albus
ENSMAMG00000002841	-	98	86.671	MGP_CAROLIEiJ_G0031879	Smarca4	100	86.378	Mus_caroli
ENSMAMG00000002841	-	98	86.671	ENSMUSG00000032187	Smarca4	99	86.378	Mus_musculus
ENSMAMG00000002841	-	98	86.888	MGP_PahariEiJ_G0014745	Smarca4	100	86.378	Mus_pahari
ENSMAMG00000002841	-	98	86.671	MGP_SPRETEiJ_G0033003	Smarca4	100	86.378	Mus_spretus
ENSMAMG00000002841	-	98	87.061	ENSMPUG00000005711	SMARCA4	95	86.906	Mustela_putorius_furo
ENSMAMG00000002841	-	98	87.061	ENSMLUG00000004491	-	99	83.293	Myotis_lucifugus
ENSMAMG00000002841	-	98	87.093	ENSNGAG00000021852	Smarca4	95	86.580	Nannospalax_galili
ENSMAMG00000002841	-	92	92.753	ENSNBRG00000018865	-	99	92.463	Neolamprologus_brichardi
ENSMAMG00000002841	-	98	85.957	ENSNBRG00000011457	smarca4a	96	85.519	Neolamprologus_brichardi
ENSMAMG00000002841	-	98	83.128	ENSNLEG00000012389	SMARCA4	94	83.062	Nomascus_leucogenys
ENSMAMG00000002841	-	79	93.103	ENSOPRG00000000885	-	77	93.103	Ochotona_princeps
ENSMAMG00000002841	-	98	85.631	ENSODEG00000017127	SMARCA4	95	84.446	Octodon_degus
ENSMAMG00000002841	-	99	96.168	ENSONIG00000018040	-	100	96.168	Oreochromis_niloticus
ENSMAMG00000002841	-	98	88.555	ENSONIG00000008196	smarca4a	99	84.420	Oreochromis_niloticus
ENSMAMG00000002841	-	98	82.185	ENSOCUG00000001787	SMARCA4	95	81.658	Oryctolagus_cuniculus
ENSMAMG00000002841	-	97	93.584	ENSORLG00000003955	-	100	93.317	Oryzias_latipes
ENSMAMG00000002841	-	94	86.635	ENSORLG00000015452	smarca4a	95	86.223	Oryzias_latipes
ENSMAMG00000002841	-	97	93.588	ENSORLG00020009728	-	100	93.381	Oryzias_latipes_hni
ENSMAMG00000002841	-	94	86.367	ENSORLG00020004611	smarca4a	99	84.056	Oryzias_latipes_hni
ENSMAMG00000002841	-	94	86.367	ENSORLG00015016560	smarca4a	98	85.842	Oryzias_latipes_hsok
ENSMAMG00000002841	-	100	92.840	ENSORLG00015007739	-	100	93.019	Oryzias_latipes_hsok
ENSMAMG00000002841	-	98	86.844	ENSOMEG00000007486	smarca4a	95	86.520	Oryzias_melastigma
ENSMAMG00000002841	-	97	93.951	ENSOMEG00000016626	-	100	93.791	Oryzias_melastigma
ENSMAMG00000002841	-	92	85.093	ENSOGAG00000016148	SMARCA4	100	84.738	Otolemur_garnettii
ENSMAMG00000002841	-	98	86.897	ENSOARG00000017454	SMARCA4	95	86.741	Ovis_aries
ENSMAMG00000002841	-	98	86.931	ENSPPAG00000043191	SMARCA4	95	86.840	Pan_paniscus
ENSMAMG00000002841	-	98	87.021	ENSPPRG00000000064	SMARCA4	95	86.866	Panthera_pardus
ENSMAMG00000002841	-	93	85.800	ENSPTIG00000017447	SMARCA4	99	78.258	Panthera_tigris_altaica
ENSMAMG00000002841	-	98	86.931	ENSPTRG00000010488	SMARCA4	95	86.840	Pan_troglodytes
ENSMAMG00000002841	-	98	87.044	ENSPANG00000011042	SMARCA4	94	86.888	Papio_anubis
ENSMAMG00000002841	-	94	88.564	ENSPKIG00000010087	-	99	83.838	Paramormyrops_kingsleyae
ENSMAMG00000002841	-	98	88.175	ENSPKIG00000007770	SMARCA4	99	85.360	Paramormyrops_kingsleyae
ENSMAMG00000002841	-	98	76.474	ENSPSIG00000005547	SMARCA4	99	78.826	Pelodiscus_sinensis
ENSMAMG00000002841	-	98	86.567	ENSPEMG00000020389	Smarca4	99	82.653	Peromyscus_maniculatus_bairdii
ENSMAMG00000002841	-	98	87.118	ENSPCIG00000017138	SMARCA4	99	83.504	Phascolarctos_cinereus
ENSMAMG00000002841	-	98	85.119	ENSPFOG00000007892	smarca4a	99	81.905	Poecilia_formosa
ENSMAMG00000002841	-	100	93.914	ENSPFOG00000012930	-	100	94.212	Poecilia_formosa
ENSMAMG00000002841	-	98	85.311	ENSPLAG00000014294	smarca4a	99	82.085	Poecilia_latipinna
ENSMAMG00000002841	-	99	95.103	ENSPLAG00000018616	-	96	95.103	Poecilia_latipinna
ENSMAMG00000002841	-	98	85.183	ENSPMEG00000003725	smarca4a	96	84.971	Poecilia_mexicana
ENSMAMG00000002841	-	98	91.741	ENSPMEG00000008929	-	96	93.660	Poecilia_mexicana
ENSMAMG00000002841	-	98	85.066	ENSPREG00000014608	smarca4a	99	81.878	Poecilia_reticulata
ENSMAMG00000002841	-	95	94.410	ENSPREG00000014823	-	96	94.410	Poecilia_reticulata
ENSMAMG00000002841	-	98	85.360	ENSPPYG00000009568	SMARCA4	99	81.710	Pongo_abelii
ENSMAMG00000002841	-	78	90.110	ENSPCAG00000014054	SMARCA4	73	89.888	Procavia_capensis
ENSMAMG00000002841	-	98	86.996	ENSPCOG00000023011	SMARCA4	95	86.671	Propithecus_coquereli
ENSMAMG00000002841	-	93	80.263	ENSPVAG00000007787	SMARCA4	90	79.849	Pteropus_vampyrus
ENSMAMG00000002841	-	98	87.178	ENSPNYG00000000717	smarca4a	96	85.816	Pundamilia_nyererei
ENSMAMG00000002841	-	99	94.538	ENSPNYG00000023995	-	99	94.668	Pundamilia_nyererei
ENSMAMG00000002841	-	98	89.133	ENSPNAG00000006636	-	97	88.300	Pygocentrus_nattereri
ENSMAMG00000002841	-	97	80.322	ENSPNAG00000024136	smarca4a	98	80.774	Pygocentrus_nattereri
ENSMAMG00000002841	-	98	86.736	ENSRNOG00000009271	Smarca4	99	82.802	Rattus_norvegicus
ENSMAMG00000002841	-	98	86.866	ENSRBIG00000038696	SMARCA4	94	86.775	Rhinopithecus_bieti
ENSMAMG00000002841	-	98	86.931	ENSRROG00000045509	SMARCA4	95	86.840	Rhinopithecus_roxellana
ENSMAMG00000002841	-	98	86.931	ENSSBOG00000026896	SMARCA4	95	86.840	Saimiri_boliviensis_boliviensis
ENSMAMG00000002841	-	98	86.792	ENSSHAG00000001642	SMARCA4	99	83.323	Sarcophilus_harrisii
ENSMAMG00000002841	-	98	88.054	ENSSFOG00015013823	smarca4	99	85.136	Scleropages_formosus
ENSMAMG00000002841	-	98	87.516	ENSSMAG00000003200	smarca4a	99	83.193	Scophthalmus_maximus
ENSMAMG00000002841	-	100	94.026	ENSSMAG00000014082	-	100	94.026	Scophthalmus_maximus
ENSMAMG00000002841	-	99	96.739	ENSSDUG00000005388	-	100	97.900	Seriola_dumerili
ENSMAMG00000002841	-	98	84.224	ENSSDUG00000017298	smarca4a	95	83.867	Seriola_dumerili
ENSMAMG00000002841	-	98	86.242	ENSSLDG00000024486	smarca4a	100	84.966	Seriola_lalandi_dorsalis
ENSMAMG00000002841	-	99	97.605	ENSSLDG00000023663	-	98	97.605	Seriola_lalandi_dorsalis
ENSMAMG00000002841	-	61	97.516	ENSSARG00000013477	SMARCA4	82	97.516	Sorex_araneus
ENSMAMG00000002841	-	98	82.925	ENSSPUG00000004558	SMARCA4	98	82.750	Sphenodon_punctatus
ENSMAMG00000002841	-	100	97.206	ENSSPAG00000012533	-	100	97.206	Stegastes_partitus
ENSMAMG00000002841	-	98	85.732	ENSSPAG00000004248	smarca4a	99	83.896	Stegastes_partitus
ENSMAMG00000002841	-	98	87.086	ENSSSCG00000013629	SMARCA4	95	86.931	Sus_scrofa
ENSMAMG00000002841	-	54	84.652	ENSTGUG00000015488	-	99	84.570	Taeniopygia_guttata
ENSMAMG00000002841	-	99	90.327	ENSTRUG00000001378	SMARCA4	99	91.584	Takifugu_rubripes
ENSMAMG00000002841	-	92	80.616	ENSTRUG00000004885	smarca4a	100	79.932	Takifugu_rubripes
ENSMAMG00000002841	-	75	84.397	ENSTNIG00000004859	-	100	84.512	Tetraodon_nigroviridis
ENSMAMG00000002841	-	99	92.288	ENSTNIG00000004536	SMARCA4	100	89.571	Tetraodon_nigroviridis
ENSMAMG00000002841	-	50	98.649	ENSTBEG00000000707	-	51	98.571	Tupaia_belangeri
ENSMAMG00000002841	-	98	84.301	ENSTTRG00000009519	SMARCA4	99	80.559	Tursiops_truncatus
ENSMAMG00000002841	-	98	87.126	ENSUAMG00000014661	SMARCA4	95	86.971	Ursus_americanus
ENSMAMG00000002841	-	94	88.624	ENSUMAG00000022005	SMARCA4	98	89.751	Ursus_maritimus
ENSMAMG00000002841	-	98	87.126	ENSVVUG00000017820	SMARCA4	92	86.971	Vulpes_vulpes
ENSMAMG00000002841	-	98	83.291	ENSXETG00000009355	smarca4	99	82.446	Xenopus_tropicalis
ENSMAMG00000002841	-	98	91.178	ENSXCOG00000013494	-	94	91.047	Xiphophorus_couchianus
ENSMAMG00000002841	-	98	85.328	ENSXMAG00000006321	smarca4a	100	83.657	Xiphophorus_maculatus
ENSMAMG00000002841	-	100	93.910	ENSXMAG00000007030	-	100	94.030	Xiphophorus_maculatus