EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000002964 (Gene tree)
Gene ID: 113131446
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 9284 bases
Position: chrOOHQ01000028.1:12749079-12758362
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000004586	NUC173	PF08161.12	2.2e-74	1	1
ENSMAMP00000004559	NUC173	PF08161.12	2.2e-74	1	1
ENSMAMP00000004636	NUC173	PF08161.12	3e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000004674	-	3738	-	ENSMAMP00000004559	1245 (aa)	-	-
ENSMAMT00000004701	-	3907	-	ENSMAMP00000004586	1211 (aa)	-	-
ENSMAMT00000004753	-	3752	-	ENSMAMP00000004636	1183 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000002964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002964's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002964	rrp12	92	82.432	ENSG00000052749	RRP12	93	82.432	Homo_sapiens
ENSMAMG00000002964	rrp12	99	87.655	ENSAPOG00000013355	rrp12	99	87.344	Acanthochromis_polyacanthus
ENSMAMG00000002964	rrp12	99	62.388	ENSAMEG00000000134	RRP12	99	61.783	Ailuropoda_melanoleuca
ENSMAMG00000002964	rrp12	99	89.351	ENSACIG00000022673	rrp12	99	86.474	Amphilophus_citrinellus
ENSMAMG00000002964	rrp12	99	90.765	ENSAOCG00000016149	rrp12	99	87.812	Amphiprion_ocellaris
ENSMAMG00000002964	rrp12	99	88.889	ENSAPEG00000016023	rrp12	99	87.062	Amphiprion_percula
ENSMAMG00000002964	rrp12	99	90.698	ENSATEG00000022627	rrp12	99	87.822	Anabas_testudineus
ENSMAMG00000002964	rrp12	99	60.579	ENSAPLG00000014387	RRP12	99	59.310	Anas_platyrhynchos
ENSMAMG00000002964	rrp12	99	60.231	ENSACAG00000002175	RRP12	99	58.696	Anolis_carolinensis
ENSMAMG00000002964	rrp12	91	82.432	ENSANAG00000037485	RRP12	93	82.432	Aotus_nancymaae
ENSMAMG00000002964	rrp12	99	88.693	ENSACLG00000007354	rrp12	99	86.006	Astatotilapia_calliptera
ENSMAMG00000002964	rrp12	99	76.598	ENSAMXG00000012852	rrp12	99	74.688	Astyanax_mexicanus
ENSMAMG00000002964	rrp12	99	62.418	ENSBTAG00000002191	RRP12	93	80.263	Bos_taurus
ENSMAMG00000002964	rrp12	92	60.000	ENSCJAG00000016549	-	99	60.238	Callithrix_jacchus
ENSMAMG00000002964	rrp12	99	62.449	ENSCAFG00000009043	RRP12	99	61.580	Canis_familiaris
ENSMAMG00000002964	rrp12	99	62.449	ENSCAFG00020005991	RRP12	99	61.580	Canis_lupus_dingo
ENSMAMG00000002964	rrp12	99	59.692	ENSCHIG00000011876	RRP12	99	59.522	Capra_hircus
ENSMAMG00000002964	rrp12	58	55.172	ENSTSYG00000030210	-	98	56.087	Carlito_syrichta
ENSMAMG00000002964	rrp12	100	56.511	ENSCAPG00000008991	RRP12	97	56.515	Cavia_aperea
ENSMAMG00000002964	rrp12	100	61.823	ENSCPOG00000004215	RRP12	99	61.466	Cavia_porcellus
ENSMAMG00000002964	rrp12	75	73.913	ENSCCAG00000024088	RRP12	98	66.824	Cebus_capucinus
ENSMAMG00000002964	rrp12	76	57.739	ENSCCAG00000033123	-	82	57.790	Cebus_capucinus
ENSMAMG00000002964	rrp12	99	58.224	ENSCATG00000045310	RRP12	99	58.476	Cercocebus_atys
ENSMAMG00000002964	rrp12	100	61.098	ENSCLAG00000003753	RRP12	99	61.449	Chinchilla_lanigera
ENSMAMG00000002964	rrp12	96	60.889	ENSCSAG00000005877	RRP12	99	61.667	Chlorocebus_sabaeus
ENSMAMG00000002964	rrp12	58	69.218	ENSCHOG00000003095	-	56	69.218	Choloepus_hoffmanni
ENSMAMG00000002964	rrp12	99	64.827	ENSCPBG00000011935	RRP12	97	65.008	Chrysemys_picta_bellii
ENSMAMG00000002964	rrp12	69	39.763	ENSCSAVG00000006059	-	99	40.344	Ciona_savignyi
ENSMAMG00000002964	rrp12	91	87.302	ENSCANG00000031653	RRP12	93	83.784	Colobus_angolensis_palliatus
ENSMAMG00000002964	rrp12	96	63.194	ENSCGRG00001004338	Rrp12	99	63.465	Cricetulus_griseus_chok1gshd
ENSMAMG00000002964	rrp12	99	63.487	ENSCGRG00000011965	Rrp12	99	61.790	Cricetulus_griseus_crigri
ENSMAMG00000002964	rrp12	99	86.364	ENSCSEG00000007799	rrp12	99	83.997	Cynoglossus_semilaevis
ENSMAMG00000002964	rrp12	99	86.928	ENSCVAG00000003418	rrp12	99	84.597	Cyprinodon_variegatus
ENSMAMG00000002964	rrp12	99	74.565	ENSDARG00000022410	rrp12	99	72.422	Danio_rerio
ENSMAMG00000002964	rrp12	99	61.608	ENSDNOG00000005120	RRP12	99	61.288	Dasypus_novemcinctus
ENSMAMG00000002964	rrp12	99	62.284	ENSDORG00000009199	Rrp12	99	62.189	Dipodomys_ordii
ENSMAMG00000002964	rrp12	97	49.367	FBgn0030504	CG2691	93	50.000	Drosophila_melanogaster
ENSMAMG00000002964	rrp12	92	60.440	ENSETEG00000002455	RRP12	93	60.440	Echinops_telfairi
ENSMAMG00000002964	rrp12	89	61.333	ENSEBUG00000006555	rrp12	97	49.268	Eptatretus_burgeri
ENSMAMG00000002964	rrp12	99	62.275	ENSEASG00005008693	RRP12	99	61.616	Equus_asinus_asinus
ENSMAMG00000002964	rrp12	99	62.275	ENSECAG00000010892	RRP12	99	62.758	Equus_caballus
ENSMAMG00000002964	rrp12	68	56.250	ENSEEUG00000005447	-	61	56.471	Erinaceus_europaeus
ENSMAMG00000002964	rrp12	99	78.695	ENSELUG00000010510	rrp12	100	78.644	Esox_lucius
ENSMAMG00000002964	rrp12	97	81.081	ENSFCAG00000028639	RRP12	93	81.081	Felis_catus
ENSMAMG00000002964	rrp12	99	63.292	ENSFALG00000008458	RRP12	99	63.765	Ficedula_albicollis
ENSMAMG00000002964	rrp12	99	62.069	ENSFDAG00000019108	RRP12	95	61.760	Fukomys_damarensis
ENSMAMG00000002964	rrp12	99	78.554	ENSFHEG00000004148	rrp12	99	76.549	Fundulus_heteroclitus
ENSMAMG00000002964	rrp12	96	80.899	ENSGMOG00000004188	rrp12	95	80.899	Gadus_morhua
ENSMAMG00000002964	rrp12	99	63.726	ENSGALG00000041331	RRP12	96	64.219	Gallus_gallus
ENSMAMG00000002964	rrp12	99	87.105	ENSGAFG00000009038	rrp12	99	84.531	Gambusia_affinis
ENSMAMG00000002964	rrp12	99	86.190	ENSGACG00000007175	rrp12	99	83.984	Gasterosteus_aculeatus
ENSMAMG00000002964	rrp12	69	67.359	ENSGAGG00000019169	RRP12	99	64.373	Gopherus_agassizii
ENSMAMG00000002964	rrp12	92	82.432	ENSGGOG00000014850	RRP12	93	82.432	Gorilla_gorilla
ENSMAMG00000002964	rrp12	99	89.028	ENSHBUG00000023527	rrp12	99	86.016	Haplochromis_burtoni
ENSMAMG00000002964	rrp12	99	61.823	ENSHGLG00000016772	RRP12	99	61.652	Heterocephalus_glaber_female
ENSMAMG00000002964	rrp12	99	61.823	ENSHGLG00100015110	RRP12	99	61.652	Heterocephalus_glaber_male
ENSMAMG00000002964	rrp12	100	82.846	ENSHCOG00000019519	rrp12	99	82.948	Hippocampus_comes
ENSMAMG00000002964	rrp12	100	75.371	ENSIPUG00000000311	RRP12	99	74.092	Ictalurus_punctatus
ENSMAMG00000002964	rrp12	99	62.869	ENSSTOG00000006515	RRP12	99	62.490	Ictidomys_tridecemlineatus
ENSMAMG00000002964	rrp12	99	62.459	ENSJJAG00000000110	Rrp12	98	61.632	Jaculus_jaculus
ENSMAMG00000002964	rrp12	99	87.094	ENSKMAG00000020621	rrp12	99	86.193	Kryptolebias_marmoratus
ENSMAMG00000002964	rrp12	99	83.987	ENSLBEG00000015335	rrp12	99	84.518	Labrus_bergylta
ENSMAMG00000002964	rrp12	71	64.815	ENSLACG00000016633	RRP12	81	64.815	Latimeria_chalumnae
ENSMAMG00000002964	rrp12	99	70.905	ENSLOCG00000003846	rrp12	99	69.082	Lepisosteus_oculatus
ENSMAMG00000002964	rrp12	99	62.092	ENSLAFG00000015965	RRP12	99	61.193	Loxodonta_africana
ENSMAMG00000002964	rrp12	91	85.714	ENSMFAG00000041558	RRP12	93	82.432	Macaca_fascicularis
ENSMAMG00000002964	rrp12	91	85.714	ENSMMUG00000019634	RRP12	93	82.432	Macaca_mulatta
ENSMAMG00000002964	rrp12	91	85.714	ENSMNEG00000036759	RRP12	93	82.432	Macaca_nemestrina
ENSMAMG00000002964	rrp12	91	87.302	ENSMLEG00000041317	RRP12	99	74.342	Mandrillus_leucophaeus
ENSMAMG00000002964	rrp12	99	88.777	ENSMZEG00005003241	rrp12	99	85.781	Maylandia_zebra
ENSMAMG00000002964	rrp12	99	63.136	ENSMGAG00000009829	RRP12	99	61.008	Meleagris_gallopavo
ENSMAMG00000002964	rrp12	99	60.852	ENSMAUG00000020743	Rrp12	99	60.918	Mesocricetus_auratus
ENSMAMG00000002964	rrp12	99	62.787	ENSMICG00000007624	RRP12	93	84.932	Microcebus_murinus
ENSMAMG00000002964	rrp12	100	62.654	ENSMOCG00000006753	Rrp12	99	62.053	Microtus_ochrogaster
ENSMAMG00000002964	rrp12	100	86.469	ENSMMOG00000010708	rrp12	99	86.667	Mola_mola
ENSMAMG00000002964	rrp12	99	62.850	ENSMODG00000004315	RRP12	99	62.432	Monodelphis_domestica
ENSMAMG00000002964	rrp12	99	85.360	ENSMALG00000016560	rrp12	98	88.946	Monopterus_albus
ENSMAMG00000002964	rrp12	99	62.175	MGP_CAROLIEiJ_G0022957	Rrp12	99	61.787	Mus_caroli
ENSMAMG00000002964	rrp12	99	63.115	ENSMUSG00000035049	Rrp12	99	62.519	Mus_musculus
ENSMAMG00000002964	rrp12	100	62.817	MGP_PahariEiJ_G0014447	Rrp12	99	62.519	Mus_pahari
ENSMAMG00000002964	rrp12	99	63.197	MGP_SPRETEiJ_G0023878	Rrp12	99	62.675	Mus_spretus
ENSMAMG00000002964	rrp12	99	62.193	ENSMPUG00000017046	RRP12	99	61.378	Mustela_putorius_furo
ENSMAMG00000002964	rrp12	99	62.120	ENSMLUG00000017160	RRP12	99	61.610	Myotis_lucifugus
ENSMAMG00000002964	rrp12	99	62.735	ENSNGAG00000024144	Rrp12	99	62.286	Nannospalax_galili
ENSMAMG00000002964	rrp12	99	87.043	ENSNBRG00000009987	rrp12	99	87.043	Neolamprologus_brichardi
ENSMAMG00000002964	rrp12	99	54.911	ENSNLEG00000013762	RRP12	99	55.070	Nomascus_leucogenys
ENSMAMG00000002964	rrp12	97	71.111	ENSMEUG00000003185	RRP12	89	71.111	Notamacropus_eugenii
ENSMAMG00000002964	rrp12	94	66.223	ENSOPRG00000005001	RRP12	93	66.223	Ochotona_princeps
ENSMAMG00000002964	rrp12	100	62.273	ENSODEG00000016439	RRP12	99	62.009	Octodon_degus
ENSMAMG00000002964	rrp12	99	89.196	ENSONIG00000009528	rrp12	99	86.172	Oreochromis_niloticus
ENSMAMG00000002964	rrp12	99	59.771	ENSOANG00000006560	RRP12	99	58.805	Ornithorhynchus_anatinus
ENSMAMG00000002964	rrp12	99	62.100	ENSOCUG00000005662	RRP12	99	62.150	Oryctolagus_cuniculus
ENSMAMG00000002964	rrp12	99	85.940	ENSORLG00000008688	rrp12	99	85.849	Oryzias_latipes
ENSMAMG00000002964	rrp12	97	85.666	ENSORLG00020002355	rrp12	99	83.280	Oryzias_latipes_hni
ENSMAMG00000002964	rrp12	99	85.774	ENSORLG00015006709	rrp12	99	83.425	Oryzias_latipes_hsok
ENSMAMG00000002964	rrp12	97	86.175	ENSOMEG00000002609	rrp12	99	83.758	Oryzias_melastigma
ENSMAMG00000002964	rrp12	99	61.998	ENSOGAG00000001626	RRP12	99	61.128	Otolemur_garnettii
ENSMAMG00000002964	rrp12	99	61.928	ENSOARG00000009681	RRP12	99	60.341	Ovis_aries
ENSMAMG00000002964	rrp12	92	82.432	ENSPPAG00000043885	RRP12	93	82.432	Pan_paniscus
ENSMAMG00000002964	rrp12	97	79.730	ENSPPRG00000002029	RRP12	93	79.730	Panthera_pardus
ENSMAMG00000002964	rrp12	97	81.081	ENSPTIG00000004428	RRP12	93	81.081	Panthera_tigris_altaica
ENSMAMG00000002964	rrp12	92	82.432	ENSPTRG00000002806	RRP12	93	82.432	Pan_troglodytes
ENSMAMG00000002964	rrp12	91	87.302	ENSPANG00000021360	RRP12	93	83.784	Papio_anubis
ENSMAMG00000002964	rrp12	99	74.217	ENSPKIG00000016516	rrp12	99	72.529	Paramormyrops_kingsleyae
ENSMAMG00000002964	rrp12	99	82.696	ENSPMGG00000020217	rrp12	99	80.235	Periophthalmus_magnuspinnatus
ENSMAMG00000002964	rrp12	100	63.339	ENSPEMG00000008437	Rrp12	99	62.704	Peromyscus_maniculatus_bairdii
ENSMAMG00000002964	rrp12	82	55.370	ENSPMAG00000007493	rrp12	99	45.503	Petromyzon_marinus
ENSMAMG00000002964	rrp12	99	63.314	ENSPCIG00000002157	RRP12	99	62.607	Phascolarctos_cinereus
ENSMAMG00000002964	rrp12	99	86.273	ENSPFOG00000014975	rrp12	99	83.750	Poecilia_formosa
ENSMAMG00000002964	rrp12	99	86.190	ENSPLAG00000009840	rrp12	99	83.672	Poecilia_latipinna
ENSMAMG00000002964	rrp12	99	86.273	ENSPMEG00000021871	rrp12	99	83.750	Poecilia_mexicana
ENSMAMG00000002964	rrp12	99	82.799	ENSPREG00000020950	rrp12	99	82.799	Poecilia_reticulata
ENSMAMG00000002964	rrp12	99	61.979	ENSPPYG00000002528	RRP12	99	61.133	Pongo_abelii
ENSMAMG00000002964	rrp12	94	81.818	ENSPCAG00000008967	RRP12	88	81.818	Procavia_capensis
ENSMAMG00000002964	rrp12	92	82.432	ENSPCOG00000014009	RRP12	93	82.432	Propithecus_coquereli
ENSMAMG00000002964	rrp12	99	59.247	ENSPVAG00000003370	RRP12	99	59.394	Pteropus_vampyrus
ENSMAMG00000002964	rrp12	99	89.363	ENSPNYG00000009451	rrp12	99	86.635	Pundamilia_nyererei
ENSMAMG00000002964	rrp12	99	75.622	ENSPNAG00000007658	rrp12	99	73.688	Pygocentrus_nattereri
ENSMAMG00000002964	rrp12	99	62.920	ENSRNOG00000048495	Rrp12	99	62.305	Rattus_norvegicus
ENSMAMG00000002964	rrp12	91	87.302	ENSRBIG00000021296	RRP12	93	83.784	Rhinopithecus_bieti
ENSMAMG00000002964	rrp12	91	87.302	ENSRROG00000032482	RRP12	93	83.784	Rhinopithecus_roxellana
ENSMAMG00000002964	rrp12	91	82.432	ENSSBOG00000030992	RRP12	93	82.432	Saimiri_boliviensis_boliviensis
ENSMAMG00000002964	rrp12	99	62.572	ENSSHAG00000018275	RRP12	99	62.402	Sarcophilus_harrisii
ENSMAMG00000002964	rrp12	99	77.133	ENSSFOG00015016400	rrp12	99	74.805	Scleropages_formosus
ENSMAMG00000002964	rrp12	99	89.259	ENSSMAG00000004047	rrp12	99	86.865	Scophthalmus_maximus
ENSMAMG00000002964	rrp12	99	91.840	ENSSDUG00000022871	rrp12	99	90.152	Seriola_dumerili
ENSMAMG00000002964	rrp12	99	91.507	ENSSLDG00000003038	rrp12	99	88.428	Seriola_lalandi_dorsalis
ENSMAMG00000002964	rrp12	99	62.303	ENSSPUG00000012221	RRP12	99	60.684	Sphenodon_punctatus
ENSMAMG00000002964	rrp12	99	90.599	ENSSPAG00000002261	rrp12	99	89.528	Stegastes_partitus
ENSMAMG00000002964	rrp12	100	60.786	ENSSSCG00000010514	RRP12	99	61.025	Sus_scrofa
ENSMAMG00000002964	rrp12	96	60.593	ENSTGUG00000009711	RRP12	99	60.808	Taeniopygia_guttata
ENSMAMG00000002964	rrp12	100	80.017	ENSTRUG00000012017	rrp12	99	78.233	Takifugu_rubripes
ENSMAMG00000002964	rrp12	100	85.549	ENSTNIG00000016522	rrp12	99	83.099	Tetraodon_nigroviridis
ENSMAMG00000002964	rrp12	80	75.145	ENSTBEG00000004907	RRP12	80	72.549	Tupaia_belangeri
ENSMAMG00000002964	rrp12	100	58.982	ENSTTRG00000009878	RRP12	99	59.285	Tursiops_truncatus
ENSMAMG00000002964	rrp12	99	62.531	ENSUAMG00000009092	RRP12	99	62.432	Ursus_americanus
ENSMAMG00000002964	rrp12	99	61.557	ENSUMAG00000021621	RRP12	99	60.873	Ursus_maritimus
ENSMAMG00000002964	rrp12	99	62.655	ENSVVUG00000023168	RRP12	99	61.568	Vulpes_vulpes
ENSMAMG00000002964	rrp12	99	65.815	ENSXETG00000003430	rrp12	99	64.743	Xenopus_tropicalis
ENSMAMG00000002964	rrp12	98	83.662	ENSXCOG00000012082	rrp12	99	83.662	Xiphophorus_couchianus
ENSMAMG00000002964	rrp12	99	86.439	ENSXMAG00000013498	rrp12	99	84.848	Xiphophorus_maculatus