EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003034 (Gene tree)
Gene ID: 113141408
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4411 bases
Position: chrOOHQ01000092.1:19084672-19089082
Accession: 113141408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000004495	RRM_1	PF00076.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000004610	-	2619	-	ENSMAMP00000004495	272 (aa)	XP_026181594	UPI000E45E4B3

Gene Model

Click here to download ENSMAMG00000003034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003034	alyref	100	51.812	ENSMAMG00000005464	-	100	50.362

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003034	alyref	100	53.986	ENSAPOG00000000183	-	100	52.899	Acanthochromis_polyacanthus
ENSMAMG00000003034	alyref	100	50.000	ENSACIG00000020351	-	100	51.237	Amphilophus_citrinellus
ENSMAMG00000003034	alyref	99	79.779	ENSACIG00000006351	alyref	98	82.117	Amphilophus_citrinellus
ENSMAMG00000003034	alyref	100	51.087	ENSAOCG00000019305	-	100	51.812	Amphiprion_ocellaris
ENSMAMG00000003034	alyref	100	96.715	ENSAOCG00000014012	alyref	100	96.715	Amphiprion_ocellaris
ENSMAMG00000003034	alyref	100	52.899	ENSAPEG00000013527	-	100	51.812	Amphiprion_percula
ENSMAMG00000003034	alyref	100	96.715	ENSAPEG00000014603	alyref	100	96.715	Amphiprion_percula
ENSMAMG00000003034	alyref	100	80.216	ENSATEG00000004307	alyref	100	83.813	Anabas_testudineus
ENSMAMG00000003034	alyref	100	56.884	ENSATEG00000000382	-	100	55.036	Anabas_testudineus
ENSMAMG00000003034	alyref	51	73.759	ENSAPLG00000014745	-	100	72.222	Anas_platyrhynchos
ENSMAMG00000003034	alyref	100	54.286	ENSACLG00000010184	-	100	55.160	Astatotilapia_calliptera
ENSMAMG00000003034	alyref	100	83.516	ENSACLG00000008432	alyref	100	85.348	Astatotilapia_calliptera
ENSMAMG00000003034	alyref	100	72.954	ENSAMXG00000007359	alyref	100	72.954	Astyanax_mexicanus
ENSMAMG00000003034	alyref	99	48.736	ENSCING00000013568	-	99	46.290	Ciona_intestinalis
ENSMAMG00000003034	alyref	99	45.620	ENSCSAVG00000003324	-	99	42.456	Ciona_savignyi
ENSMAMG00000003034	alyref	100	80.220	ENSCSEG00000017800	alyref	100	78.309	Cynoglossus_semilaevis
ENSMAMG00000003034	alyref	100	83.088	ENSCVAG00000014869	alyref	100	83.456	Cyprinodon_variegatus
ENSMAMG00000003034	alyref	100	46.975	ENSCVAG00000007789	-	100	45.324	Cyprinodon_variegatus
ENSMAMG00000003034	alyref	100	78.521	ENSDARG00000077732	alyref	100	72.792	Danio_rerio
ENSMAMG00000003034	alyref	97	46.237	FBgn0010774	Ref1	73	45.411	Drosophila_melanogaster
ENSMAMG00000003034	alyref	99	52.416	ENSEBUG00000008253	alyref	95	50.181	Eptatretus_burgeri
ENSMAMG00000003034	alyref	100	37.809	ENSEBUG00000006305	alyref	100	38.811	Eptatretus_burgeri
ENSMAMG00000003034	alyref	100	69.643	ENSELUG00000008849	-	100	67.626	Esox_lucius
ENSMAMG00000003034	alyref	100	74.368	ENSELUG00000017178	alyref	100	72.302	Esox_lucius
ENSMAMG00000003034	alyref	59	79.268	ENSFALG00000011923	-	96	73.750	Ficedula_albicollis
ENSMAMG00000003034	alyref	100	84.307	ENSFHEG00000019426	alyref	100	87.226	Fundulus_heteroclitus
ENSMAMG00000003034	alyref	100	46.209	ENSFHEG00000004698	-	100	46.739	Fundulus_heteroclitus
ENSMAMG00000003034	alyref	100	72.628	ENSGMOG00000009882	alyref	100	71.533	Gadus_morhua
ENSMAMG00000003034	alyref	69	61.658	ENSGMOG00000013122	-	100	59.896	Gadus_morhua
ENSMAMG00000003034	alyref	100	80.866	ENSGAFG00000006014	alyref	100	79.422	Gambusia_affinis
ENSMAMG00000003034	alyref	100	47.080	ENSGAFG00000007573	-	100	46.739	Gambusia_affinis
ENSMAMG00000003034	alyref	100	55.714	ENSHBUG00000001454	-	100	55.872	Haplochromis_burtoni
ENSMAMG00000003034	alyref	100	83.516	ENSHBUG00000020196	alyref	100	85.348	Haplochromis_burtoni
ENSMAMG00000003034	alyref	98	50.741	ENSHCOG00000012825	-	94	49.630	Hippocampus_comes
ENSMAMG00000003034	alyref	100	72.857	ENSIPUG00000009469	alyref	100	72.760	Ictalurus_punctatus
ENSMAMG00000003034	alyref	75	64.706	ENSSTOG00000016570	-	92	63.402	Ictidomys_tridecemlineatus
ENSMAMG00000003034	alyref	100	81.522	ENSKMAG00000008912	alyref	100	84.727	Kryptolebias_marmoratus
ENSMAMG00000003034	alyref	100	52.364	ENSKMAG00000006462	-	100	50.909	Kryptolebias_marmoratus
ENSMAMG00000003034	alyref	100	50.173	ENSLBEG00000005387	-	66	56.345	Labrus_bergylta
ENSMAMG00000003034	alyref	100	83.094	ENSLBEG00000023118	alyref	90	80.935	Labrus_bergylta
ENSMAMG00000003034	alyref	99	49.817	ENSLBEG00000012930	-	99	50.916	Labrus_bergylta
ENSMAMG00000003034	alyref	78	71.429	ENSLOCG00000013879	alyref	89	71.889	Lepisosteus_oculatus
ENSMAMG00000003034	alyref	100	53.929	ENSMZEG00005012096	-	100	54.804	Maylandia_zebra
ENSMAMG00000003034	alyref	100	83.516	ENSMZEG00005008639	alyref	100	85.348	Maylandia_zebra
ENSMAMG00000003034	alyref	99	47.601	ENSMMOG00000007032	-	98	43.643	Mola_mola
ENSMAMG00000003034	alyref	99	85.978	ENSMMOG00000012458	alyref	97	82.418	Mola_mola
ENSMAMG00000003034	alyref	100	53.521	ENSMALG00000006054	-	100	52.518	Monopterus_albus
ENSMAMG00000003034	alyref	100	60.211	ENSMLUG00000006521	-	100	58.719	Myotis_lucifugus
ENSMAMG00000003034	alyref	98	57.353	ENSMLUG00000022178	-	98	54.044	Myotis_lucifugus
ENSMAMG00000003034	alyref	98	55.830	ENSMLUG00000022467	-	98	53.405	Myotis_lucifugus
ENSMAMG00000003034	alyref	98	56.835	ENSMLUG00000030671	-	99	53.381	Myotis_lucifugus
ENSMAMG00000003034	alyref	100	60.000	ENSMLUG00000014372	-	100	58.007	Myotis_lucifugus
ENSMAMG00000003034	alyref	98	56.827	ENSMLUG00000009247	-	98	52.727	Myotis_lucifugus
ENSMAMG00000003034	alyref	100	60.498	ENSMLUG00000004098	-	100	58.007	Myotis_lucifugus
ENSMAMG00000003034	alyref	98	55.914	ENSMLUG00000028605	-	98	53.763	Myotis_lucifugus
ENSMAMG00000003034	alyref	100	70.182	ENSNGAG00000022014	-	100	65.441	Nannospalax_galili
ENSMAMG00000003034	alyref	100	84.364	ENSNBRG00000001747	alyref	100	86.909	Neolamprologus_brichardi
ENSMAMG00000003034	alyref	100	55.036	ENSNBRG00000017460	-	100	55.197	Neolamprologus_brichardi
ENSMAMG00000003034	alyref	100	55.435	ENSONIG00000003296	-	100	56.679	Oreochromis_niloticus
ENSMAMG00000003034	alyref	100	81.655	ENSONIG00000019434	alyref	100	84.892	Oreochromis_niloticus
ENSMAMG00000003034	alyref	99	41.534	ENSORLG00000001620	-	59	47.489	Oryzias_latipes
ENSMAMG00000003034	alyref	100	81.455	ENSORLG00020011942	alyref	100	84.727	Oryzias_latipes_hni
ENSMAMG00000003034	alyref	99	50.183	ENSORLG00020015673	-	99	45.238	Oryzias_latipes_hni
ENSMAMG00000003034	alyref	99	50.183	ENSORLG00015015143	-	99	45.238	Oryzias_latipes_hsok
ENSMAMG00000003034	alyref	100	81.685	ENSORLG00015022664	alyref	100	81.685	Oryzias_latipes_hsok
ENSMAMG00000003034	alyref	99	47.970	ENSOMEG00000007158	-	97	44.364	Oryzias_melastigma
ENSMAMG00000003034	alyref	100	83.577	ENSOMEG00000019176	alyref	100	84.672	Oryzias_melastigma
ENSMAMG00000003034	alyref	70	78.421	ENSPPAG00000036403	-	68	72.632	Pan_paniscus
ENSMAMG00000003034	alyref	100	74.275	ENSPKIG00000007070	alyref	100	70.609	Paramormyrops_kingsleyae
ENSMAMG00000003034	alyref	99	73.162	ENSPKIG00000006233	-	81	67.033	Paramormyrops_kingsleyae
ENSMAMG00000003034	alyref	71	50.000	ENSPMGG00000012994	-	97	47.619	Periophthalmus_magnuspinnatus
ENSMAMG00000003034	alyref	99	77.695	ENSPMGG00000016600	alyref	91	74.265	Periophthalmus_magnuspinnatus
ENSMAMG00000003034	alyref	100	66.176	ENSPEMG00000016628	-	100	61.765	Peromyscus_maniculatus_bairdii
ENSMAMG00000003034	alyref	100	80.216	ENSPFOG00000022825	alyref	99	79.496	Poecilia_formosa
ENSMAMG00000003034	alyref	100	46.237	ENSPFOG00000017094	-	100	44.928	Poecilia_formosa
ENSMAMG00000003034	alyref	100	46.237	ENSPLAG00000014380	-	100	44.928	Poecilia_latipinna
ENSMAMG00000003034	alyref	100	80.144	ENSPLAG00000006948	alyref	100	79.783	Poecilia_latipinna
ENSMAMG00000003034	alyref	100	46.237	ENSPMEG00000023039	-	100	44.928	Poecilia_mexicana
ENSMAMG00000003034	alyref	100	80.216	ENSPMEG00000003547	alyref	100	79.496	Poecilia_mexicana
ENSMAMG00000003034	alyref	100	80.505	ENSPREG00000015795	alyref	100	80.144	Poecilia_reticulata
ENSMAMG00000003034	alyref	100	48.736	ENSPREG00000003649	-	100	46.715	Poecilia_reticulata
ENSMAMG00000003034	alyref	99	51.056	ENSPNYG00000002879	-	98	50.903	Pundamilia_nyererei
ENSMAMG00000003034	alyref	100	83.516	ENSPNYG00000017498	alyref	100	85.348	Pundamilia_nyererei
ENSMAMG00000003034	alyref	100	75.180	ENSPNAG00000002531	alyref	100	70.036	Pygocentrus_nattereri
ENSMAMG00000003034	alyref	74	77.000	ENSSBOG00000030924	-	87	71.357	Saimiri_boliviensis_boliviensis
ENSMAMG00000003034	alyref	99	55.678	ENSSHAG00000012866	-	99	52.206	Sarcophilus_harrisii
ENSMAMG00000003034	alyref	99	55.714	ENSSHAG00000000609	-	99	53.091	Sarcophilus_harrisii
ENSMAMG00000003034	alyref	78	77.674	ENSSFOG00015003923	alyref	73	72.430	Scleropages_formosus
ENSMAMG00000003034	alyref	70	77.604	ENSSFOG00015003678	alyref	83	71.875	Scleropages_formosus
ENSMAMG00000003034	alyref	100	53.047	ENSSMAG00000011169	-	100	55.556	Scophthalmus_maximus
ENSMAMG00000003034	alyref	100	84.058	ENSSMAG00000009283	alyref	100	81.522	Scophthalmus_maximus
ENSMAMG00000003034	alyref	100	84.982	ENSSDUG00000016158	alyref	100	86.813	Seriola_dumerili
ENSMAMG00000003034	alyref	100	90.110	ENSSLDG00000017803	alyref	100	91.575	Seriola_lalandi_dorsalis
ENSMAMG00000003034	alyref	99	53.650	ENSSPAG00000017028	-	96	52.555	Stegastes_partitus
ENSMAMG00000003034	alyref	100	51.601	ENSTRUG00000003051	-	100	49.097	Takifugu_rubripes
ENSMAMG00000003034	alyref	100	51.636	ENSTNIG00000014136	-	100	46.545	Tetraodon_nigroviridis
ENSMAMG00000003034	alyref	100	75.812	ENSTNIG00000011595	alyref	100	71.739	Tetraodon_nigroviridis
ENSMAMG00000003034	alyref	71	79.897	ENSVVUG00000000272	-	82	74.093	Vulpes_vulpes
ENSMAMG00000003034	alyref	99	79.927	ENSXCOG00000018047	alyref	99	77.617	Xiphophorus_couchianus
ENSMAMG00000003034	alyref	100	47.292	ENSXMAG00000018086	-	100	46.014	Xiphophorus_maculatus
ENSMAMG00000003034	alyref	99	79.927	ENSXMAG00000012218	alyref	99	77.617	Xiphophorus_maculatus