EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003035 (Gene tree)
Gene ID: 113135150
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 13708 bases
Position: chrOOHQ01000107.1:12568509-12582216
Accession: 113135150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	1	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	2	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	3	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	4	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	5	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	6	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	7	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	8	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	9	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	10	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	11	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	12	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	13	14
ENSMAMP00000004561	KH_1	PF00013.29	1.6e-189	14	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	1	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	2	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	3	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	4	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	5	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	6	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	7	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	8	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	9	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	10	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	11	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	12	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	13	14
ENSMAMP00000004587	KH_1	PF00013.29	1.2e-188	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000004676	-	4081	-	ENSMAMP00000004561	1268 (aa)	XP_026170632	UPI000E4549B3
ENSMAMT00000004702	-	3756	-	ENSMAMP00000004587	1251 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003035	hdlbpb	100	71.719	ENSMAMG00000008611	hdlbpa	100	71.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003035	hdlbpb	100	97.634	ENSAPOG00000006904	hdlbpb	100	97.634	Acanthochromis_polyacanthus
ENSMAMG00000003035	hdlbpb	100	91.153	ENSACIG00000016154	hdlbpb	100	91.706	Amphilophus_citrinellus
ENSMAMG00000003035	hdlbpb	100	98.107	ENSAOCG00000004083	hdlbpb	100	98.107	Amphiprion_ocellaris
ENSMAMG00000003035	hdlbpb	100	98.028	ENSAPEG00000012270	hdlbpb	100	98.028	Amphiprion_percula
ENSMAMG00000003035	hdlbpb	100	96.767	ENSATEG00000019877	hdlbpb	100	96.767	Anabas_testudineus
ENSMAMG00000003035	hdlbpb	100	82.078	ENSACAG00000003606	-	100	82.078	Anolis_carolinensis
ENSMAMG00000003035	hdlbpb	100	97.161	ENSACLG00000006618	hdlbpb	100	97.161	Astatotilapia_calliptera
ENSMAMG00000003035	hdlbpb	100	77.795	ENSAMXG00000019946	hdlbpb	100	77.795	Astyanax_mexicanus
ENSMAMG00000003035	hdlbpb	100	95.426	ENSCSEG00000000955	hdlbpb	100	95.426	Cynoglossus_semilaevis
ENSMAMG00000003035	hdlbpb	100	95.978	ENSCVAG00000005345	hdlbpb	100	95.978	Cyprinodon_variegatus
ENSMAMG00000003035	hdlbpb	99	85.872	ENSDARG00000061864	hdlbpb	99	85.872	Danio_rerio
ENSMAMG00000003035	hdlbpb	95	69.805	ENSEBUG00000005304	hdlbpb	97	69.635	Eptatretus_burgeri
ENSMAMG00000003035	hdlbpb	100	78.414	ENSELUG00000019925	hdlbpb	100	78.571	Esox_lucius
ENSMAMG00000003035	hdlbpb	88	34.204	ENSFHEG00000001701	hdlbpb	100	91.325	Fundulus_heteroclitus
ENSMAMG00000003035	hdlbpb	96	87.937	ENSGMOG00000004522	hdlbpb	78	87.937	Gadus_morhua
ENSMAMG00000003035	hdlbpb	100	95.741	ENSGAFG00000005278	hdlbpb	100	95.741	Gambusia_affinis
ENSMAMG00000003035	hdlbpb	99	92.581	ENSGACG00000019361	hdlbpb	100	92.818	Gasterosteus_aculeatus
ENSMAMG00000003035	hdlbpb	100	97.003	ENSHBUG00000018434	hdlbpb	100	97.003	Haplochromis_burtoni
ENSMAMG00000003035	hdlbpb	100	84.791	ENSIPUG00000003291	HDLBP	100	84.991	Ictalurus_punctatus
ENSMAMG00000003035	hdlbpb	100	96.372	ENSKMAG00000016562	hdlbpb	100	96.372	Kryptolebias_marmoratus
ENSMAMG00000003035	hdlbpb	100	96.924	ENSLBEG00000027855	hdlbpb	100	96.924	Labrus_bergylta
ENSMAMG00000003035	hdlbpb	100	85.075	ENSLACG00000007661	hdlbpb	90	85.075	Latimeria_chalumnae
ENSMAMG00000003035	hdlbpb	100	82.884	ENSLOCG00000013909	hdlbpb	100	82.884	Lepisosteus_oculatus
ENSMAMG00000003035	hdlbpb	100	97.161	ENSMZEG00005021465	hdlbpb	100	97.161	Maylandia_zebra
ENSMAMG00000003035	hdlbpb	100	95.899	ENSMMOG00000012525	hdlbpb	100	95.899	Mola_mola
ENSMAMG00000003035	hdlbpb	100	95.584	ENSMALG00000008938	hdlbpb	100	95.584	Monopterus_albus
ENSMAMG00000003035	hdlbpb	100	97.240	ENSNBRG00000002236	hdlbpb	100	97.240	Neolamprologus_brichardi
ENSMAMG00000003035	hdlbpb	100	96.924	ENSONIG00000009211	hdlbpb	100	96.924	Oreochromis_niloticus
ENSMAMG00000003035	hdlbpb	100	95.110	ENSORLG00000006581	hdlbpb	100	95.110	Oryzias_latipes
ENSMAMG00000003035	hdlbpb	100	95.268	ENSORLG00020010012	hdlbpb	100	95.268	Oryzias_latipes_hni
ENSMAMG00000003035	hdlbpb	100	95.426	ENSORLG00015006863	hdlbpb	100	95.426	Oryzias_latipes_hsok
ENSMAMG00000003035	hdlbpb	100	95.505	ENSOMEG00000011131	hdlbpb	100	95.505	Oryzias_melastigma
ENSMAMG00000003035	hdlbpb	100	88.722	ENSPKIG00000005966	hdlbpb	100	88.801	Paramormyrops_kingsleyae
ENSMAMG00000003035	hdlbpb	86	91.667	ENSPMGG00000019853	hdlbpb	99	91.667	Periophthalmus_magnuspinnatus
ENSMAMG00000003035	hdlbpb	96	74.561	ENSPMAG00000002131	hdlbpb	100	74.671	Petromyzon_marinus
ENSMAMG00000003035	hdlbpb	93	66.438	ENSPMAG00000000249	-	99	66.225	Petromyzon_marinus
ENSMAMG00000003035	hdlbpb	100	95.164	ENSPFOG00000008755	hdlbpb	100	95.164	Poecilia_formosa
ENSMAMG00000003035	hdlbpb	100	96.215	ENSPLAG00000007055	hdlbpb	100	96.215	Poecilia_latipinna
ENSMAMG00000003035	hdlbpb	100	96.136	ENSPMEG00000001952	hdlbpb	100	96.136	Poecilia_mexicana
ENSMAMG00000003035	hdlbpb	100	96.057	ENSPREG00000012848	hdlbpb	100	96.057	Poecilia_reticulata
ENSMAMG00000003035	hdlbpb	100	97.003	ENSPNYG00000022467	hdlbpb	100	97.003	Pundamilia_nyererei
ENSMAMG00000003035	hdlbpb	100	87.776	ENSPNAG00000011104	hdlbpb	100	87.776	Pygocentrus_nattereri
ENSMAMG00000003035	hdlbpb	100	87.855	ENSSFOG00015023199	hdlbpb	100	87.855	Scleropages_formosus
ENSMAMG00000003035	hdlbpb	100	96.767	ENSSMAG00000008790	hdlbpb	100	96.767	Scophthalmus_maximus
ENSMAMG00000003035	hdlbpb	100	97.950	ENSSDUG00000020694	hdlbpb	100	97.950	Seriola_dumerili
ENSMAMG00000003035	hdlbpb	100	97.319	ENSSLDG00000020807	hdlbpb	100	97.319	Seriola_lalandi_dorsalis
ENSMAMG00000003035	hdlbpb	100	82.650	ENSSPUG00000018688	-	100	82.650	Sphenodon_punctatus
ENSMAMG00000003035	hdlbpb	100	97.950	ENSSPAG00000016969	hdlbpb	100	97.950	Stegastes_partitus
ENSMAMG00000003035	hdlbpb	98	93.112	ENSTRUG00000012888	hdlbpb	99	93.112	Takifugu_rubripes
ENSMAMG00000003035	hdlbpb	99	94.049	ENSTNIG00000002555	hdlbpb	100	94.049	Tetraodon_nigroviridis
ENSMAMG00000003035	hdlbpb	100	83.632	ENSXCOG00000001797	hdlbpb	100	83.632	Xiphophorus_couchianus
ENSMAMG00000003035	hdlbpb	100	95.347	ENSXMAG00000015633	hdlbpb	100	95.347	Xiphophorus_maculatus