EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003040 (Gene tree)
Gene ID: 113124989
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6045 bases
Position: chrOOHQ01000096.1:6160222-6166266
Accession: 113124989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000004524	zf-C2H2	PF00096.26	1.8e-26	1	5
ENSMAMP00000004524	zf-C2H2	PF00096.26	1.8e-26	2	5
ENSMAMP00000004524	zf-C2H2	PF00096.26	1.8e-26	3	5
ENSMAMP00000004524	zf-C2H2	PF00096.26	1.8e-26	4	5
ENSMAMP00000004524	zf-C2H2	PF00096.26	1.8e-26	5	5
ENSMAMP00000004564	zf-C2H2	PF00096.26	1.3e-25	1	5
ENSMAMP00000004564	zf-C2H2	PF00096.26	1.3e-25	2	5
ENSMAMP00000004564	zf-C2H2	PF00096.26	1.3e-25	3	5
ENSMAMP00000004564	zf-C2H2	PF00096.26	1.3e-25	4	5
ENSMAMP00000004564	zf-C2H2	PF00096.26	1.3e-25	5	5
ENSMAMP00000004500	zf-C2H2	PF00096.26	2.4e-25	1	5
ENSMAMP00000004500	zf-C2H2	PF00096.26	2.4e-25	2	5
ENSMAMP00000004500	zf-C2H2	PF00096.26	2.4e-25	3	5
ENSMAMP00000004500	zf-C2H2	PF00096.26	2.4e-25	4	5
ENSMAMP00000004500	zf-C2H2	PF00096.26	2.4e-25	5	5
ENSMAMP00000004510	zf-C2H2	PF00096.26	2.4e-25	1	5
ENSMAMP00000004510	zf-C2H2	PF00096.26	2.4e-25	2	5
ENSMAMP00000004510	zf-C2H2	PF00096.26	2.4e-25	3	5
ENSMAMP00000004510	zf-C2H2	PF00096.26	2.4e-25	4	5
ENSMAMP00000004510	zf-C2H2	PF00096.26	2.4e-25	5	5
ENSMAMP00000004564	zf-met	PF12874.7	1.3e-08	1	2
ENSMAMP00000004564	zf-met	PF12874.7	1.3e-08	2	2
ENSMAMP00000004524	zf-met	PF12874.7	1.4e-08	1	2
ENSMAMP00000004524	zf-met	PF12874.7	1.4e-08	2	2
ENSMAMP00000004500	zf-met	PF12874.7	2.2e-08	1	2
ENSMAMP00000004500	zf-met	PF12874.7	2.2e-08	2	2
ENSMAMP00000004510	zf-met	PF12874.7	2.2e-08	1	2
ENSMAMP00000004510	zf-met	PF12874.7	2.2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000004615	-	3838	-	ENSMAMP00000004500	328 (aa)	XP_026153999	UPI000E457898
ENSMAMT00000004639	-	1554	-	ENSMAMP00000004524	349 (aa)	-	-
ENSMAMT00000004625	-	3706	-	ENSMAMP00000004510	328 (aa)	XP_026153999	UPI000E457898
ENSMAMT00000004679	-	918	-	ENSMAMP00000004564	305 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003040	gfi1b	77	35.669	ENSMAMG00000004457	PRDM15	55	35.849
ENSMAMG00000003040	gfi1b	67	39.535	ENSMAMG00000017939	-	80	41.322
ENSMAMG00000003040	gfi1b	63	42.500	ENSMAMG00000022154	-	55	42.500
ENSMAMG00000003040	gfi1b	56	42.105	ENSMAMG00000022152	-	51	42.105
ENSMAMG00000003040	gfi1b	55	44.526	ENSMAMG00000016087	-	84	44.526
ENSMAMG00000003040	gfi1b	95	41.667	ENSMAMG00000000234	zbtb24	54	41.667
ENSMAMG00000003040	gfi1b	61	39.412	ENSMAMG00000016542	-	60	39.634
ENSMAMG00000003040	gfi1b	58	43.609	ENSMAMG00000015087	znf319b	90	43.609
ENSMAMG00000003040	gfi1b	61	41.085	ENSMAMG00000019385	-	66	40.741
ENSMAMG00000003040	gfi1b	59	42.500	ENSMAMG00000019301	-	97	43.284
ENSMAMG00000003040	gfi1b	55	40.541	ENSMAMG00000018137	-	62	41.429
ENSMAMG00000003040	gfi1b	57	41.875	ENSMAMG00000002731	znf1056	82	42.384
ENSMAMG00000003040	gfi1b	58	44.643	ENSMAMG00000008000	znf341	58	40.816
ENSMAMG00000003040	gfi1b	55	40.397	ENSMAMG00000016519	-	96	40.397
ENSMAMG00000003040	gfi1b	60	34.783	ENSMAMG00000018536	-	63	35.043
ENSMAMG00000003040	gfi1b	58	45.455	ENSMAMG00000001157	znf236	54	45.455
ENSMAMG00000003040	gfi1b	66	41.791	ENSMAMG00000022206	-	76	41.791
ENSMAMG00000003040	gfi1b	54	42.308	ENSMAMG00000015434	-	73	42.308
ENSMAMG00000003040	gfi1b	78	39.881	ENSMAMG00000006312	-	92	41.212
ENSMAMG00000003040	gfi1b	63	33.607	ENSMAMG00000002166	zbtb41	61	33.607
ENSMAMG00000003040	gfi1b	74	41.250	ENSMAMG00000009051	-	91	41.250
ENSMAMG00000003040	gfi1b	75	35.593	ENSMAMG00000015632	snai2	79	35.593
ENSMAMG00000003040	gfi1b	55	46.584	ENSMAMG00000014758	-	83	46.584
ENSMAMG00000003040	gfi1b	55	44.937	ENSMAMG00000018114	-	79	44.937
ENSMAMG00000003040	gfi1b	56	45.946	ENSMAMG00000016119	-	83	46.341
ENSMAMG00000003040	gfi1b	61	37.500	ENSMAMG00000009817	-	79	43.662
ENSMAMG00000003040	gfi1b	96	42.857	ENSMAMG00000010902	-	76	42.857
ENSMAMG00000003040	gfi1b	63	44.944	ENSMAMG00000017946	-	79	44.944
ENSMAMG00000003040	gfi1b	59	44.361	ENSMAMG00000016484	-	94	44.361
ENSMAMG00000003040	gfi1b	55	40.476	ENSMAMG00000007352	-	98	40.476
ENSMAMG00000003040	gfi1b	58	40.854	ENSMAMG00000013419	prdm5	74	40.854
ENSMAMG00000003040	gfi1b	65	40.288	ENSMAMG00000000789	-	69	40.288
ENSMAMG00000003040	gfi1b	57	49.412	ENSMAMG00000022147	-	68	49.412
ENSMAMG00000003040	gfi1b	55	40.000	ENSMAMG00000001808	zbtb47b	68	40.000
ENSMAMG00000003040	gfi1b	58	40.541	ENSMAMG00000018743	-	72	40.541
ENSMAMG00000003040	gfi1b	100	51.026	ENSMAMG00000008125	gfi1ab	100	51.026
ENSMAMG00000003040	gfi1b	56	40.708	ENSMAMG00000009313	znf646	56	40.708
ENSMAMG00000003040	gfi1b	58	43.609	ENSMAMG00000017911	ZNF319	93	43.609
ENSMAMG00000003040	gfi1b	60	36.957	ENSMAMG00000002083	-	94	45.000
ENSMAMG00000003040	gfi1b	55	37.037	ENSMAMG00000020994	snai1a	97	37.037
ENSMAMG00000003040	gfi1b	63	39.416	ENSMAMG00000015670	-	68	39.416
ENSMAMG00000003040	gfi1b	60	40.196	ENSMAMG00000022502	-	93	41.250
ENSMAMG00000003040	gfi1b	59	43.750	ENSMAMG00000013025	-	50	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003040	gfi1b	100	84.451	ENSAPOG00000001296	gfi1b	100	84.451	Acanthochromis_polyacanthus
ENSMAMG00000003040	gfi1b	99	76.221	ENSACIG00000002190	gfi1b	99	76.221	Amphilophus_citrinellus
ENSMAMG00000003040	gfi1b	100	84.756	ENSAOCG00000021187	gfi1b	100	84.756	Amphiprion_ocellaris
ENSMAMG00000003040	gfi1b	100	85.366	ENSAPEG00000016196	gfi1b	100	85.366	Amphiprion_percula
ENSMAMG00000003040	gfi1b	100	89.970	ENSATEG00000002534	gfi1b	100	89.970	Anabas_testudineus
ENSMAMG00000003040	gfi1b	100	59.412	ENSAPLG00000003373	GFI1B	100	59.412	Anas_platyrhynchos
ENSMAMG00000003040	gfi1b	100	78.963	ENSACLG00000027053	gfi1b	100	78.963	Astatotilapia_calliptera
ENSMAMG00000003040	gfi1b	100	72.861	ENSAMXG00000037544	GFI1B	100	72.861	Astyanax_mexicanus
ENSMAMG00000003040	gfi1b	100	59.692	ENSCAPG00000010404	GFI1B	100	59.692	Cavia_aperea
ENSMAMG00000003040	gfi1b	100	59.538	ENSCPBG00000021186	GFI1B	100	59.538	Chrysemys_picta_bellii
ENSMAMG00000003040	gfi1b	100	82.424	ENSCSEG00000001315	gfi1b	100	82.424	Cynoglossus_semilaevis
ENSMAMG00000003040	gfi1b	100	82.792	ENSCVAG00000017168	gfi1b	100	82.792	Cyprinodon_variegatus
ENSMAMG00000003040	gfi1b	100	71.848	ENSDARG00000079947	gfi1b	99	86.498	Danio_rerio
ENSMAMG00000003040	gfi1b	72	51.598	ENSEEUG00000012609	-	96	51.613	Erinaceus_europaeus
ENSMAMG00000003040	gfi1b	100	77.448	ENSELUG00000016933	gfi1b	100	77.448	Esox_lucius
ENSMAMG00000003040	gfi1b	100	54.891	ENSFALG00000001479	GFI1B	100	54.891	Ficedula_albicollis
ENSMAMG00000003040	gfi1b	100	87.500	ENSFHEG00000015138	gfi1b	100	87.500	Fundulus_heteroclitus
ENSMAMG00000003040	gfi1b	100	72.549	ENSGMOG00000019123	gfi1b	91	83.200	Gadus_morhua
ENSMAMG00000003040	gfi1b	100	60.117	ENSGALG00000003478	GFI1B	100	60.117	Gallus_gallus
ENSMAMG00000003040	gfi1b	77	94.444	ENSGAFG00000003059	gfi1b	100	94.444	Gambusia_affinis
ENSMAMG00000003040	gfi1b	100	77.054	ENSGACG00000018134	gfi1b	100	77.054	Gasterosteus_aculeatus
ENSMAMG00000003040	gfi1b	100	61.791	ENSGAGG00000021327	GFI1B	100	61.791	Gopherus_agassizii
ENSMAMG00000003040	gfi1b	100	78.963	ENSHBUG00000005451	gfi1b	100	78.963	Haplochromis_burtoni
ENSMAMG00000003040	gfi1b	100	78.963	ENSHCOG00000013713	gfi1b	100	78.963	Hippocampus_comes
ENSMAMG00000003040	gfi1b	100	73.653	ENSIPUG00000012769	gfi1b	100	73.653	Ictalurus_punctatus
ENSMAMG00000003040	gfi1b	99	53.243	ENSJJAG00000016355	Gfi1b	100	53.243	Jaculus_jaculus
ENSMAMG00000003040	gfi1b	100	85.152	ENSKMAG00000016047	gfi1b	100	85.152	Kryptolebias_marmoratus
ENSMAMG00000003040	gfi1b	100	84.894	ENSLBEG00000020297	gfi1b	99	85.498	Labrus_bergylta
ENSMAMG00000003040	gfi1b	100	60.778	ENSLACG00000012207	GFI1B	100	60.778	Latimeria_chalumnae
ENSMAMG00000003040	gfi1b	100	67.560	ENSLOCG00000005750	gfi1b	100	67.560	Lepisosteus_oculatus
ENSMAMG00000003040	gfi1b	100	58.892	ENSLAFG00000022367	GFI1B	100	58.892	Loxodonta_africana
ENSMAMG00000003040	gfi1b	99	78.899	ENSMZEG00005015594	gfi1b	100	78.659	Maylandia_zebra
ENSMAMG00000003040	gfi1b	100	59.531	ENSMGAG00000006129	GFI1B	100	59.531	Meleagris_gallopavo
ENSMAMG00000003040	gfi1b	100	86.930	ENSMMOG00000011764	gfi1b	100	86.930	Mola_mola
ENSMAMG00000003040	gfi1b	100	54.190	ENSMODG00000012600	GFI1B	100	54.190	Monodelphis_domestica
ENSMAMG00000003040	gfi1b	100	88.720	ENSMALG00000004034	gfi1b	100	88.720	Monopterus_albus
ENSMAMG00000003040	gfi1b	99	58.683	ENSNGAG00000003333	Gfi1b	100	58.683	Nannospalax_galili
ENSMAMG00000003040	gfi1b	100	79.027	ENSNBRG00000012391	gfi1b	100	79.027	Neolamprologus_brichardi
ENSMAMG00000003040	gfi1b	100	79.027	ENSONIG00000013011	gfi1b	96	92.179	Oreochromis_niloticus
ENSMAMG00000003040	gfi1b	100	60.991	ENSOANG00000014723	GFI1B	100	60.991	Ornithorhynchus_anatinus
ENSMAMG00000003040	gfi1b	100	61.801	ENSORLG00000014390	GFI1B	96	74.820	Oryzias_latipes
ENSMAMG00000003040	gfi1b	100	80.000	ENSORLG00020003719	GFI1B	100	80.000	Oryzias_latipes_hni
ENSMAMG00000003040	gfi1b	100	79.394	ENSORLG00015017142	gfi1b	100	79.394	Oryzias_latipes_hsok
ENSMAMG00000003040	gfi1b	100	78.354	ENSOMEG00000015149	GFI1B	100	78.354	Oryzias_melastigma
ENSMAMG00000003040	gfi1b	100	59.172	ENSOGAG00000008879	GFI1B	100	58.859	Otolemur_garnettii
ENSMAMG00000003040	gfi1b	100	72.024	ENSPKIG00000007643	gfi1b	100	72.024	Paramormyrops_kingsleyae
ENSMAMG00000003040	gfi1b	100	59.884	ENSPSIG00000012112	GFI1B	100	59.884	Pelodiscus_sinensis
ENSMAMG00000003040	gfi1b	99	72.930	ENSPMGG00000006021	gfi1b	99	73.885	Periophthalmus_magnuspinnatus
ENSMAMG00000003040	gfi1b	100	52.304	ENSPCIG00000019724	GFI1B	100	52.304	Phascolarctos_cinereus
ENSMAMG00000003040	gfi1b	100	85.672	ENSPFOG00000003460	gfi1b	100	85.672	Poecilia_formosa
ENSMAMG00000003040	gfi1b	100	84.071	ENSPLAG00000017181	GFI1B	100	84.071	Poecilia_latipinna
ENSMAMG00000003040	gfi1b	100	86.930	ENSPLAG00000021960	GFI1B	100	86.930	Poecilia_latipinna
ENSMAMG00000003040	gfi1b	100	86.930	ENSPMEG00000019220	gfi1b	100	86.930	Poecilia_mexicana
ENSMAMG00000003040	gfi1b	100	86.930	ENSPMEG00000001556	GFI1B	100	86.930	Poecilia_mexicana
ENSMAMG00000003040	gfi1b	100	86.930	ENSPREG00000021718	gfi1b	100	86.930	Poecilia_reticulata
ENSMAMG00000003040	gfi1b	100	78.354	ENSPNYG00000018422	gfi1b	100	78.354	Pundamilia_nyererei
ENSMAMG00000003040	gfi1b	100	72.156	ENSPNAG00000021118	gfi1b	100	72.156	Pygocentrus_nattereri
ENSMAMG00000003040	gfi1b	100	49.322	ENSSHAG00000006462	GFI1B	100	49.322	Sarcophilus_harrisii
ENSMAMG00000003040	gfi1b	97	62.278	ENSSFOG00015011566	gfi1b	90	65.714	Scleropages_formosus
ENSMAMG00000003040	gfi1b	100	86.322	ENSSMAG00000015181	gfi1b	99	85.329	Scophthalmus_maximus
ENSMAMG00000003040	gfi1b	100	92.073	ENSSDUG00000011604	gfi1b	100	92.073	Seriola_dumerili
ENSMAMG00000003040	gfi1b	100	91.159	ENSSLDG00000013823	gfi1b	100	91.159	Seriola_lalandi_dorsalis
ENSMAMG00000003040	gfi1b	100	49.854	ENSSPUG00000016039	GFI1B	100	49.854	Sphenodon_punctatus
ENSMAMG00000003040	gfi1b	100	87.195	ENSSPAG00000022914	gfi1b	100	87.195	Stegastes_partitus
ENSMAMG00000003040	gfi1b	53	58.678	ENSTGUG00000015953	-	86	47.368	Taeniopygia_guttata
ENSMAMG00000003040	gfi1b	54	91.228	ENSTGUG00000005282	-	99	92.793	Taeniopygia_guttata
ENSMAMG00000003040	gfi1b	100	83.537	ENSTRUG00000004525	gfi1b	100	83.537	Takifugu_rubripes
ENSMAMG00000003040	gfi1b	100	81.459	ENSTNIG00000003834	gfi1b	100	81.459	Tetraodon_nigroviridis
ENSMAMG00000003040	gfi1b	100	43.988	ENSTBEG00000014459	GFI1B	100	43.988	Tupaia_belangeri
ENSMAMG00000003040	gfi1b	100	56.140	ENSXETG00000006263	gfi1b	100	57.478	Xenopus_tropicalis
ENSMAMG00000003040	gfi1b	100	86.626	ENSXMAG00000027589	gfi1b	100	86.626	Xiphophorus_maculatus