EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000003076 (Gene tree)
Gene ID
113131243
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specificity factor subunit 3-like
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
6313 bases
Position
chrOOHQ01000014.1:520277-526589
Accession
113131243
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000004588CPSF73-100_CPF11718.84.3e-5111
ENSMAMP00000004648CPSF73-100_CPF11718.81.3e-3911
ENSMAMP00000004648Beta-CaspPF10996.87.3e-3411
ENSMAMP00000004588Beta-CaspPF10996.89.5e-3411
ENSMAMP00000004588Lactamase_BPF00753.272.6e-1811
ENSMAMP00000004648Lactamase_BPF00753.276.1e-0811
ENSMAMP00000004648RMMBLPF07521.121.5e-2111
ENSMAMP00000004588RMMBLPF07521.122e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000004703-2957-ENSMAMP00000004588686 (aa)XP_026164085UPI000E464466
ENSMAMT00000004765-1767-ENSMAMP00000004648588 (aa)--
Gene Model
Click here to download ENSMAMG00000003076's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003076's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000003076cpsf39983.096ENSMAMG00000008835CPSF39985.714
ENSMAMG00000003076cpsf36639.175ENSMAMG00000004522ints117439.427
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000003076cpsf39885.714ENSG00000119203CPSF310099.265Homo_sapiens
ENSMAMG00000003076cpsf310094.315ENSAPOG00000022087cpsf310094.315Acanthochromis_polyacanthus
ENSMAMG00000003076cpsf37794.222ENSAPOG00000012241CPSF39196.071Acanthochromis_polyacanthus
ENSMAMG00000003076cpsf39885.862ENSAMEG00000008493CPSF39985.862Ailuropoda_melanoleuca
ENSMAMG00000003076cpsf39983.307ENSACIG00000023663CPSF39983.307Amphilophus_citrinellus
ENSMAMG00000003076cpsf310086.234ENSACIG00000009846cpsf310086.234Amphilophus_citrinellus
ENSMAMG00000003076cpsf310093.732ENSAOCG00000022056cpsf310093.732Amphiprion_ocellaris
ENSMAMG00000003076cpsf39988.227ENSAOCG00000010077CPSF39988.227Amphiprion_ocellaris
ENSMAMG00000003076cpsf39988.227ENSAPEG00000021167CPSF39988.227Amphiprion_percula
ENSMAMG00000003076cpsf310093.732ENSAPEG00000019526cpsf310093.732Amphiprion_percula
ENSMAMG00000003076cpsf39995.474ENSATEG00000003959cpsf39995.474Anabas_testudineus
ENSMAMG00000003076cpsf39984.448ENSATEG00000014525CPSF39984.448Anabas_testudineus
ENSMAMG00000003076cpsf39785.373ENSAPLG00000006941CPSF39885.373Anas_platyrhynchos
ENSMAMG00000003076cpsf39878.855ENSACAG00000001759CPSF39982.650Anolis_carolinensis
ENSMAMG00000003076cpsf39880.412ENSANAG00000031254CPSF39980.781Aotus_nancymaae
ENSMAMG00000003076cpsf39983.622ENSACLG00000018846CPSF39986.486Astatotilapia_calliptera
ENSMAMG00000003076cpsf39793.656ENSACLG00000014484cpsf39993.656Astatotilapia_calliptera
ENSMAMG00000003076cpsf39986.483ENSAMXG00000004786cpsf39986.483Astyanax_mexicanus
ENSMAMG00000003076cpsf39885.862ENSBTAG00000019735CPSF39985.862Bos_taurus
ENSMAMG00000003076cpsf39457.093WBGene00013460cpsf-38958.294Caenorhabditis_elegans
ENSMAMG00000003076cpsf39885.567ENSCJAG00000006276CPSF39985.567Callithrix_jacchus
ENSMAMG00000003076cpsf39885.862ENSCAFG00000003375CPSF39585.862Canis_familiaris
ENSMAMG00000003076cpsf39487.074ENSCAFG00020026799CPSF39988.636Canis_lupus_dingo
ENSMAMG00000003076cpsf39885.862ENSCHIG00000013973CPSF39985.862Capra_hircus
ENSMAMG00000003076cpsf39885.714ENSTSYG00000002967CPSF39985.714Carlito_syrichta
ENSMAMG00000003076cpsf39685.564ENSCAPG00000013851CPSF39985.564Cavia_aperea
ENSMAMG00000003076cpsf39885.714ENSCPOG00000011299CPSF39985.714Cavia_porcellus
ENSMAMG00000003076cpsf39885.567ENSCCAG00000036730CPSF39985.567Cebus_capucinus
ENSMAMG00000003076cpsf39883.800ENSCATG00000014770CPSF39991.349Cercocebus_atys
ENSMAMG00000003076cpsf39885.714ENSCLAG00000002727CPSF39985.714Chinchilla_lanigera
ENSMAMG00000003076cpsf39877.761ENSCSAG00000007125CPSF39977.761Chlorocebus_sabaeus
ENSMAMG00000003076cpsf385100.000ENSCHOG00000000180CPSF38561.268Choloepus_hoffmanni
ENSMAMG00000003076cpsf39985.631ENSCPBG00000014074CPSF39985.631Chrysemys_picta_bellii
ENSMAMG00000003076cpsf39868.382ENSCING00000007214-9768.382Ciona_intestinalis
ENSMAMG00000003076cpsf39875.877ENSCANG00000034435CPSF39975.877Colobus_angolensis_palliatus
ENSMAMG00000003076cpsf39885.567ENSCGRG00001013134Cpsf39985.567Cricetulus_griseus_chok1gshd
ENSMAMG00000003076cpsf39885.567ENSCGRG00000018319Cpsf39985.567Cricetulus_griseus_crigri
ENSMAMG00000003076cpsf310086.397ENSCSEG00000002021CPSF310086.397Cynoglossus_semilaevis
ENSMAMG00000003076cpsf39987.500ENSCVAG00000015067CPSF39987.500Cyprinodon_variegatus
ENSMAMG00000003076cpsf310086.522ENSDARG00000027649cpsf310086.522Danio_rerio
ENSMAMG00000003076cpsf39884.853ENSDNOG00000008940CPSF39584.853Dasypus_novemcinctus
ENSMAMG00000003076cpsf39487.253ENSDORG00000014263Cpsf39986.883Dipodomys_ordii
ENSMAMG00000003076cpsf39866.421FBgn0261065Cpsf739966.421Drosophila_melanogaster
ENSMAMG00000003076cpsf39476.302ENSETEG00000003893CPSF39974.228Echinops_telfairi
ENSMAMG00000003076cpsf39183.708ENSEBUG00000009018cpsf39975.424Eptatretus_burgeri
ENSMAMG00000003076cpsf39885.862ENSEASG00005003970CPSF39985.862Equus_asinus_asinus
ENSMAMG00000003076cpsf39885.862ENSECAG00000019911CPSF39691.047Equus_caballus
ENSMAMG00000003076cpsf39871.281ENSEEUG00000015422CPSF39971.281Erinaceus_europaeus
ENSMAMG00000003076cpsf39989.244ENSELUG00000013775cpsf39989.244Esox_lucius
ENSMAMG00000003076cpsf39885.862ENSFCAG00000007852CPSF39985.862Felis_catus
ENSMAMG00000003076cpsf39980.476ENSFALG00000006572CPSF310085.317Ficedula_albicollis
ENSMAMG00000003076cpsf39885.420ENSFDAG00000006317CPSF39985.420Fukomys_damarensis
ENSMAMG00000003076cpsf310091.399ENSFHEG00000014774cpsf310091.399Fundulus_heteroclitus
ENSMAMG00000003076cpsf35867.647ENSFHEG00000012186CPSF39967.647Fundulus_heteroclitus
ENSMAMG00000003076cpsf310088.970ENSGMOG00000003157cpsf310088.970Gadus_morhua
ENSMAMG00000003076cpsf39985.051ENSGALG00000016424CPSF39985.051Gallus_gallus
ENSMAMG00000003076cpsf310087.536ENSGAFG00000008016CPSF310087.536Gambusia_affinis
ENSMAMG00000003076cpsf310085.851ENSGAFG00000019449cpsf310085.851Gambusia_affinis
ENSMAMG00000003076cpsf36780.942ENSGAGG00000025583CPSF39380.942Gopherus_agassizii
ENSMAMG00000003076cpsf39883.573ENSGGOG00000001757CPSF39197.204Gorilla_gorilla
ENSMAMG00000003076cpsf310093.586ENSHBUG00000001188cpsf310093.586Haplochromis_burtoni
ENSMAMG00000003076cpsf35880.149ENSHBUG00000014332CPSF39980.149Haplochromis_burtoni
ENSMAMG00000003076cpsf39885.420ENSHGLG00000000666CPSF39885.420Heterocephalus_glaber_female
ENSMAMG00000003076cpsf39885.420ENSHGLG00100007765CPSF39885.420Heterocephalus_glaber_male
ENSMAMG00000003076cpsf39990.351ENSHCOG00000007251cpsf39990.351Hippocampus_comes
ENSMAMG00000003076cpsf39986.773ENSHCOG00000015957CPSF39986.773Hippocampus_comes
ENSMAMG00000003076cpsf39986.483ENSIPUG00000023488cpsf39986.483Ictalurus_punctatus
ENSMAMG00000003076cpsf39885.567ENSSTOG00000004476CPSF39985.567Ictidomys_tridecemlineatus
ENSMAMG00000003076cpsf39985.169ENSJJAG00000023415Cpsf39985.169Jaculus_jaculus
ENSMAMG00000003076cpsf310091.837ENSKMAG00000002806cpsf310091.837Kryptolebias_marmoratus
ENSMAMG00000003076cpsf39987.500ENSKMAG00000007317CPSF39987.500Kryptolebias_marmoratus
ENSMAMG00000003076cpsf35492.188ENSLBEG00000015018-9987.097Labrus_bergylta
ENSMAMG00000003076cpsf39984.380ENSLBEG00000020569cpsf39684.380Labrus_bergylta
ENSMAMG00000003076cpsf39688.584ENSLBEG00000013492CPSF39988.584Labrus_bergylta
ENSMAMG00000003076cpsf39978.810ENSLACG00000008308CPSF39978.810Latimeria_chalumnae
ENSMAMG00000003076cpsf310087.302ENSLOCG00000016823cpsf310087.302Lepisosteus_oculatus
ENSMAMG00000003076cpsf39884.366ENSLAFG00000009467CPSF39984.366Loxodonta_africana
ENSMAMG00000003076cpsf39885.567ENSMFAG00000001339CPSF39494.167Macaca_fascicularis
ENSMAMG00000003076cpsf39287.796ENSMMUG00000018038CPSF39294.167Macaca_mulatta
ENSMAMG00000003076cpsf39097.200ENSMNEG00000039447CPSF39997.200Macaca_nemestrina
ENSMAMG00000003076cpsf39885.714ENSMLEG00000026825CPSF39297.198Mandrillus_leucophaeus
ENSMAMG00000003076cpsf39988.517ENSMZEG00005006258CPSF39988.517Maylandia_zebra
ENSMAMG00000003076cpsf310093.586ENSMZEG00005014358cpsf310093.586Maylandia_zebra
ENSMAMG00000003076cpsf39785.307ENSMGAG00000013995CPSF310085.307Meleagris_gallopavo
ENSMAMG00000003076cpsf35475.401ENSMAUG00000000166Cpsf39975.401Mesocricetus_auratus
ENSMAMG00000003076cpsf39880.910ENSMICG00000002363CPSF39980.910Microcebus_murinus
ENSMAMG00000003076cpsf39884.202ENSMOCG00000020067Cpsf39983.111Microtus_ochrogaster
ENSMAMG00000003076cpsf37778.723ENSMMOG00000011923CPSF38578.723Mola_mola
ENSMAMG00000003076cpsf39882.545ENSMMOG00000018212CPSF39886.003Mola_mola
ENSMAMG00000003076cpsf39884.402ENSMODG00000014703CPSF39984.402Monodelphis_domestica
ENSMAMG00000003076cpsf39685.714ENSMALG00000011474CPSF39983.937Monopterus_albus
ENSMAMG00000003076cpsf310095.627ENSMALG00000016416cpsf310095.627Monopterus_albus
ENSMAMG00000003076cpsf39885.567MGP_CAROLIEiJ_G0017640Cpsf39985.567Mus_caroli
ENSMAMG00000003076cpsf39885.567ENSMUSG00000054309Cpsf39697.458Mus_musculus
ENSMAMG00000003076cpsf39885.420MGP_PahariEiJ_G0029397Cpsf39985.420Mus_pahari
ENSMAMG00000003076cpsf39885.567MGP_SPRETEiJ_G0018481Cpsf39985.567Mus_spretus
ENSMAMG00000003076cpsf39885.735ENSMPUG00000013213CPSF39985.735Mustela_putorius_furo
ENSMAMG00000003076cpsf39885.294ENSMLUG00000010636CPSF39985.294Myotis_lucifugus
ENSMAMG00000003076cpsf39885.714ENSNGAG00000019836Cpsf39985.714Nannospalax_galili
ENSMAMG00000003076cpsf310093.149ENSNBRG00000004770cpsf310093.149Neolamprologus_brichardi
ENSMAMG00000003076cpsf39983.622ENSNBRG00000010525CPSF39986.486Neolamprologus_brichardi
ENSMAMG00000003076cpsf39885.567ENSNLEG00000013359CPSF39197.204Nomascus_leucogenys
ENSMAMG00000003076cpsf39855.376ENSMEUG00000013117-9955.523Notamacropus_eugenii
ENSMAMG00000003076cpsf39977.239ENSOPRG00000008902CPSF39977.239Ochotona_princeps
ENSMAMG00000003076cpsf39885.862ENSODEG00000003129CPSF39985.862Octodon_degus
ENSMAMG00000003076cpsf310093.586ENSONIG00000018812cpsf310093.586Oreochromis_niloticus
ENSMAMG00000003076cpsf38779.181ENSOANG00000008577CPSF39982.918Ornithorhynchus_anatinus
ENSMAMG00000003076cpsf39885.862ENSOCUG00000003728CPSF39985.862Oryctolagus_cuniculus
ENSMAMG00000003076cpsf310090.525ENSORLG00000018854cpsf310090.525Oryzias_latipes
ENSMAMG00000003076cpsf310090.379ENSORLG00020013331cpsf310090.379Oryzias_latipes_hni
ENSMAMG00000003076cpsf310090.525ENSORLG00015011017cpsf310090.525Oryzias_latipes_hsok
ENSMAMG00000003076cpsf310090.816ENSOMEG00000010647cpsf39690.816Oryzias_melastigma
ENSMAMG00000003076cpsf39875.847ENSOGAG00000001680CPSF39975.847Otolemur_garnettii
ENSMAMG00000003076cpsf39885.862ENSOARG00000015073CPSF39985.862Ovis_aries
ENSMAMG00000003076cpsf39885.714ENSPPAG00000042457CPSF39197.204Pan_paniscus
ENSMAMG00000003076cpsf39885.862ENSPPRG00000016790CPSF39986.009Panthera_pardus
ENSMAMG00000003076cpsf39885.988ENSPTIG00000003920CPSF39986.136Panthera_tigris_altaica
ENSMAMG00000003076cpsf39885.714ENSPTRG00000011638CPSF39197.204Pan_troglodytes
ENSMAMG00000003076cpsf39885.714ENSPANG00000016798CPSF39494.167Papio_anubis
ENSMAMG00000003076cpsf310088.406ENSPKIG00000023646cpsf310088.406Paramormyrops_kingsleyae
ENSMAMG00000003076cpsf39984.751ENSPSIG00000016144CPSF39984.751Pelodiscus_sinensis
ENSMAMG00000003076cpsf35878.519ENSPMGG00000015311CPSF310078.519Periophthalmus_magnuspinnatus
ENSMAMG00000003076cpsf310092.857ENSPMGG00000006141-10092.857Periophthalmus_magnuspinnatus
ENSMAMG00000003076cpsf39885.714ENSPEMG00000017668Cpsf39985.862Peromyscus_maniculatus_bairdii
ENSMAMG00000003076cpsf38287.397ENSPMAG00000004841cpsf39988.950Petromyzon_marinus
ENSMAMG00000003076cpsf39685.263ENSPCIG00000009823CPSF39886.043Phascolarctos_cinereus
ENSMAMG00000003076cpsf310086.957ENSPFOG00000010418-10086.957Poecilia_formosa
ENSMAMG00000003076cpsf310091.691ENSPFOG00000015922cpsf310091.691Poecilia_formosa
ENSMAMG00000003076cpsf310091.691ENSPLAG00000000882cpsf310091.691Poecilia_latipinna
ENSMAMG00000003076cpsf35880.000ENSPLAG00000021300-10080.000Poecilia_latipinna
ENSMAMG00000003076cpsf310091.691ENSPMEG00000018309cpsf310091.691Poecilia_mexicana
ENSMAMG00000003076cpsf310081.884ENSPREG00000004482CPSF310081.884Poecilia_reticulata
ENSMAMG00000003076cpsf310085.533ENSPREG00000014875cpsf310085.533Poecilia_reticulata
ENSMAMG00000003076cpsf39881.443ENSPPYG00000012666CPSF39981.443Pongo_abelii
ENSMAMG00000003076cpsf38464.717ENSPCAG00000015042CPSF38164.717Procavia_capensis
ENSMAMG00000003076cpsf38886.505ENSPCOG00000023016CPSF39986.505Propithecus_coquereli
ENSMAMG00000003076cpsf39885.735ENSPVAG00000005324CPSF39985.735Pteropus_vampyrus
ENSMAMG00000003076cpsf310093.586ENSPNYG00000004405cpsf310093.586Pundamilia_nyererei
ENSMAMG00000003076cpsf39491.818ENSPNYG00000021047CPSF39291.818Pundamilia_nyererei
ENSMAMG00000003076cpsf39986.773ENSPNAG00000023060cpsf39986.773Pygocentrus_nattereri
ENSMAMG00000003076cpsf39885.567ENSRNOG00000052418Cpsf39985.567Rattus_norvegicus
ENSMAMG00000003076cpsf39880.645ENSRBIG00000041615CPSF39981.481Rhinopithecus_bieti
ENSMAMG00000003076cpsf39885.714ENSRROG00000033792CPSF39985.714Rhinopithecus_roxellana
ENSMAMG00000003076cpsf39639.142YLR277CYSH19839.142Saccharomyces_cerevisiae
ENSMAMG00000003076cpsf39682.105ENSSBOG00000027263CPSF39782.105Saimiri_boliviensis_boliviensis
ENSMAMG00000003076cpsf39885.567ENSSHAG00000007024CPSF39985.567Sarcophilus_harrisii
ENSMAMG00000003076cpsf310088.406ENSSFOG00015002108cpsf310088.406Scleropages_formosus
ENSMAMG00000003076cpsf39687.215ENSSMAG00000020534CPSF39787.215Scophthalmus_maximus
ENSMAMG00000003076cpsf39988.081ENSSDUG00000018498CPSF39988.081Seriola_dumerili
ENSMAMG00000003076cpsf310095.190ENSSDUG00000002828cpsf39795.190Seriola_dumerili
ENSMAMG00000003076cpsf39988.081ENSSLDG00000005234CPSF39988.081Seriola_lalandi_dorsalis
ENSMAMG00000003076cpsf310094.898ENSSLDG00000008469cpsf39794.898Seriola_lalandi_dorsalis
ENSMAMG00000003076cpsf38882.830ENSSARG00000005186CPSF38982.830Sorex_araneus
ENSMAMG00000003076cpsf39684.006ENSSPUG00000015525CPSF39784.006Sphenodon_punctatus
ENSMAMG00000003076cpsf310093.878ENSSPAG00000018579cpsf310093.878Stegastes_partitus
ENSMAMG00000003076cpsf39988.372ENSSPAG00000002906CPSF39988.372Stegastes_partitus
ENSMAMG00000003076cpsf39885.862ENSSSCG00000020799CPSF39985.862Sus_scrofa
ENSMAMG00000003076cpsf39985.756ENSTGUG00000013016CPSF39985.756Taeniopygia_guttata
ENSMAMG00000003076cpsf39991.533ENSTRUG00000007030cpsf39891.533Takifugu_rubripes
ENSMAMG00000003076cpsf35873.267ENSTRUG00000013905CPSF39973.267Takifugu_rubripes
ENSMAMG00000003076cpsf38490.884ENSTBEG00000002707CPSF38490.884Tupaia_belangeri
ENSMAMG00000003076cpsf38673.723ENSTTRG00000000861CPSF38773.723Tursiops_truncatus
ENSMAMG00000003076cpsf39686.170ENSUAMG00000007535CPSF39586.170Ursus_americanus
ENSMAMG00000003076cpsf39586.762ENSUMAG00000003676CPSF39490.681Ursus_maritimus
ENSMAMG00000003076cpsf39288.725ENSVPAG00000008041CPSF310085.804Vicugna_pacos
ENSMAMG00000003076cpsf39885.862ENSVVUG00000002194CPSF39985.862Vulpes_vulpes
ENSMAMG00000003076cpsf39984.203ENSXETG00000008263cpsf39984.203Xenopus_tropicalis
ENSMAMG00000003076cpsf35478.495ENSXCOG00000000957-8778.495Xiphophorus_couchianus
ENSMAMG00000003076cpsf310091.399ENSXCOG00000019695cpsf310091.399Xiphophorus_couchianus
ENSMAMG00000003076cpsf310087.101ENSXMAG00000027291CPSF310087.101Xiphophorus_maculatus
ENSMAMG00000003076cpsf310091.837ENSXMAG00000009784cpsf310091.837Xiphophorus_maculatus

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