EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000003159 (Gene tree)
Gene ID
113123279
Gene Symbol
-
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
15766 bases
Position
chrOOHQ01000093.1:13510256-13526021
Accession
113123279
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000004704RRM_1PF00076.221.1e-3112
ENSMAMP00000004704RRM_1PF00076.221.1e-3122
ENSMAMP00000004658RRM_1PF00076.221.3e-3112
ENSMAMP00000004658RRM_1PF00076.221.3e-3122
ENSMAMP00000004673RRM_1PF00076.221.3e-3112
ENSMAMP00000004673RRM_1PF00076.221.3e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000004791-2023-ENSMAMP00000004673398 (aa)--
ENSMAMT00000004775-4841-ENSMAMP00000004658392 (aa)XP_026150934UPI000E455FCC
ENSMAMT00000004822-1246-ENSMAMP00000004704376 (aa)--
Gene Model
Click here to download ENSMAMG00000003159's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003159's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000003159-9173.504ENSMAMG00000003821rbms2a9468.571
ENSMAMG00000003159-5035.065ENSMAMG00000010052celf15140.385
ENSMAMG00000003159-9166.129ENSMAMG00000024043rbms38666.398
ENSMAMG00000003159-9964.433ENSMAMG00000005018rbms1a9963.918
ENSMAMG00000003159-9467.582ENSMAMG00000007264rbms2b8968.451
ENSMAMG00000003159-5035.000ENSMAMG00000019440celf5a5039.216
ENSMAMG00000003159-9367.460ENSMAMG00000002176-8168.564
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000003159-9276.353ENSG00000153250RBMS18394.286Homo_sapiens
ENSMAMG00000003159-10088.131ENSAPOG00000024437-10087.374Acanthochromis_polyacanthus
ENSMAMG00000003159-9965.128ENSAPOG00000013761rbms1a9964.615Acanthochromis_polyacanthus
ENSMAMG00000003159-9274.648ENSAMEG00000012661RBMS19274.230Ailuropoda_melanoleuca
ENSMAMG00000003159-9289.685ENSACIG00000021498RBMS18889.685Amphilophus_citrinellus
ENSMAMG00000003159-9958.718ENSACIG00000000113rbms1a9958.462Amphilophus_citrinellus
ENSMAMG00000003159-10088.861ENSAOCG00000014482-10088.861Amphiprion_ocellaris
ENSMAMG00000003159-9965.128ENSAOCG00000010066rbms1a9964.615Amphiprion_ocellaris
ENSMAMG00000003159-9965.385ENSAPEG00000023563rbms1a9965.641Amphiprion_percula
ENSMAMG00000003159-10088.608ENSAPEG00000018371-10088.608Amphiprion_percula
ENSMAMG00000003159-10089.340ENSATEG00000018573RBMS110088.579Anabas_testudineus
ENSMAMG00000003159-9963.846ENSATEG00000015450rbms1a9963.333Anabas_testudineus
ENSMAMG00000003159-9278.063ENSAPLG00000007282RBMS18977.620Anas_platyrhynchos
ENSMAMG00000003159-9977.023ENSACAG00000011984RBMS18274.559Anolis_carolinensis
ENSMAMG00000003159-8475.155ENSANAG00000024424RBMS110075.155Aotus_nancymaae
ENSMAMG00000003159-9964.103ENSACLG00000021512rbms1a9963.846Astatotilapia_calliptera
ENSMAMG00000003159-10084.810ENSACLG00000013048RBMS110084.557Astatotilapia_calliptera
ENSMAMG00000003159-10079.040ENSAMXG00000009969RBMS110078.030Astyanax_mexicanus
ENSMAMG00000003159-10070.960ENSAMXG00000002146rbms1a9970.202Astyanax_mexicanus
ENSMAMG00000003159-9775.064ENSBTAG00000005180RBMS110073.086Bos_taurus
ENSMAMG00000003159-9276.353ENSCJAG00000014861-8975.637Callithrix_jacchus
ENSMAMG00000003159-9873.138ENSCJAG00000012871-9871.907Callithrix_jacchus
ENSMAMG00000003159-9770.000ENSCJAG00000022465-9570.822Callithrix_jacchus
ENSMAMG00000003159-9775.064ENSCAFG00000009922RBMS110073.086Canis_familiaris
ENSMAMG00000003159-9771.852ENSCAFG00020006120RBMS110070.071Canis_lupus_dingo
ENSMAMG00000003159-9275.783ENSCHIG00000023380RBMS19868.983Capra_hircus
ENSMAMG00000003159-9276.353ENSTSYG00000005584RBMS19575.637Carlito_syrichta
ENSMAMG00000003159-9276.353ENSCPOG00000012310RBMS19372.358Cavia_porcellus
ENSMAMG00000003159-9276.353ENSCCAG00000033841RBMS19175.921Cebus_capucinus
ENSMAMG00000003159-9276.353ENSCATG00000043032RBMS19575.637Cercocebus_atys
ENSMAMG00000003159-9276.068ENSCLAG00000003031RBMS19572.087Chinchilla_lanigera
ENSMAMG00000003159-9276.353ENSCSAG00000015687RBMS18775.921Chlorocebus_sabaeus
ENSMAMG00000003159-10076.427ENSCPBG00000026455RBMS110075.931Chrysemys_picta_bellii
ENSMAMG00000003159-9276.353ENSCANG00000042152RBMS19575.637Colobus_angolensis_palliatus
ENSMAMG00000003159-10071.021ENSCGRG00001022833Rbms110070.546Cricetulus_griseus_chok1gshd
ENSMAMG00000003159-9276.638ENSCGRG00000008824Rbms19372.900Cricetulus_griseus_crigri
ENSMAMG00000003159-10084.887ENSCSEG00000010652RBMS110084.131Cynoglossus_semilaevis
ENSMAMG00000003159-9963.077ENSCSEG00000000889rbms1a9962.564Cynoglossus_semilaevis
ENSMAMG00000003159-9963.846ENSCVAG00000014698rbms1a9963.333Cyprinodon_variegatus
ENSMAMG00000003159-10083.249ENSCVAG00000002027RBMS110081.980Cyprinodon_variegatus
ENSMAMG00000003159-10071.859ENSDARG00000074023rbms1a9971.106Danio_rerio
ENSMAMG00000003159-9273.025ENSDNOG00000040691RBMS19572.629Dasypus_novemcinctus
ENSMAMG00000003159-9276.353ENSDORG00000007103Rbms19972.362Dipodomys_ordii
ENSMAMG00000003159-9266.382ENSETEG00000012135RBMS19366.006Echinops_telfairi
ENSMAMG00000003159-9775.064ENSEASG00005023132RBMS110073.086Equus_asinus_asinus
ENSMAMG00000003159-9771.852ENSECAG00000019894RBMS110070.071Equus_caballus
ENSMAMG00000003159-6993.750ENSEEUG00000005628RBMS16690.000Erinaceus_europaeus
ENSMAMG00000003159-10068.010ENSELUG00000018923rbms1a10066.583Esox_lucius
ENSMAMG00000003159-9972.340ENSELUG00000019328RBMS19870.408Esox_lucius
ENSMAMG00000003159-9275.783ENSFCAG00000012524RBMS19575.071Felis_catus
ENSMAMG00000003159-9278.063ENSFALG00000004440RBMS19577.620Ficedula_albicollis
ENSMAMG00000003159-9276.353ENSFDAG00000015692RBMS19372.358Fukomys_damarensis
ENSMAMG00000003159-10082.234ENSFHEG00000000720RBMS110082.234Fundulus_heteroclitus
ENSMAMG00000003159-9964.359ENSFHEG00000005662rbms1a9770.936Fundulus_heteroclitus
ENSMAMG00000003159-9063.842ENSGMOG00000000525rbms1a9964.407Gadus_morhua
ENSMAMG00000003159-9776.864ENSGALG00000011132RBMS19875.063Gallus_gallus
ENSMAMG00000003159-9066.764ENSGAFG00000011633rbms1a9466.764Gambusia_affinis
ENSMAMG00000003159-10084.010ENSGAFG00000007708RBMS110084.010Gambusia_affinis
ENSMAMG00000003159-9463.369ENSGACG00000015174rbms1a9167.901Gasterosteus_aculeatus
ENSMAMG00000003159-10086.294ENSGACG00000005671RBMS110086.041Gasterosteus_aculeatus
ENSMAMG00000003159-9878.191ENSGAGG00000007866RBMS110075.682Gopherus_agassizii
ENSMAMG00000003159-9276.353ENSGGOG00000001264RBMS19575.637Gorilla_gorilla
ENSMAMG00000003159-9773.711ENSGGOG00000043756-10071.605Gorilla_gorilla
ENSMAMG00000003159-9964.103ENSHBUG00000004802rbms1a9963.846Haplochromis_burtoni
ENSMAMG00000003159-9584.043ENSHBUG00000004516RBMS19984.043Haplochromis_burtoni
ENSMAMG00000003159-9276.068ENSHGLG00000010387RBMS19372.087Heterocephalus_glaber_female
ENSMAMG00000003159-9276.068ENSHGLG00100014105RBMS19372.087Heterocephalus_glaber_male
ENSMAMG00000003159-10081.772ENSHCOG00000016668RBMS110082.025Hippocampus_comes
ENSMAMG00000003159-9964.359ENSHCOG00000020097rbms1a9963.846Hippocampus_comes
ENSMAMG00000003159-10071.465ENSIPUG00000010131RBMS19970.707Ictalurus_punctatus
ENSMAMG00000003159-10080.000ENSIPUG00000014677RBMS110080.000Ictalurus_punctatus
ENSMAMG00000003159-9276.638ENSSTOG00000012501RBMS19372.358Ictidomys_tridecemlineatus
ENSMAMG00000003159-9275.499ENSJJAG00000016543Rbms19571.816Jaculus_jaculus
ENSMAMG00000003159-10083.797ENSKMAG00000013911RBMS110083.544Kryptolebias_marmoratus
ENSMAMG00000003159-9962.821ENSKMAG00000011839-9962.308Kryptolebias_marmoratus
ENSMAMG00000003159-10088.354ENSLBEG00000005787RBMS110088.354Labrus_bergylta
ENSMAMG00000003159-9964.615ENSLBEG00000025962rbms1a9964.103Labrus_bergylta
ENSMAMG00000003159-10075.434ENSLACG00000004324RBMS19976.179Latimeria_chalumnae
ENSMAMG00000003159-10081.519ENSLOCG00000008622rbms1a10081.266Lepisosteus_oculatus
ENSMAMG00000003159-9275.214ENSLAFG00000017217RBMS19274.788Loxodonta_africana
ENSMAMG00000003159-9276.353ENSMFAG00000000274RBMS19575.637Macaca_fascicularis
ENSMAMG00000003159-9772.099ENSMMUG00000016825RBMS110070.309Macaca_mulatta
ENSMAMG00000003159-9276.353ENSMNEG00000039425RBMS19575.637Macaca_nemestrina
ENSMAMG00000003159-9276.068ENSMLEG00000031517RBMS19575.354Mandrillus_leucophaeus
ENSMAMG00000003159-9964.103ENSMZEG00005005661rbms1a9963.846Maylandia_zebra
ENSMAMG00000003159-8786.364ENSMZEG00005007313RBMS19286.364Maylandia_zebra
ENSMAMG00000003159-9278.348ENSMGAG00000011054RBMS110077.204Meleagris_gallopavo
ENSMAMG00000003159-10071.259ENSMAUG00000008550Rbms110070.784Mesocricetus_auratus
ENSMAMG00000003159-9276.068ENSMICG00000008325RBMS19275.637Microcebus_murinus
ENSMAMG00000003159-10070.546ENSMOCG00000022617Rbms110070.071Microtus_ochrogaster
ENSMAMG00000003159-10087.848ENSMMOG00000003707RBMS110088.354Mola_mola
ENSMAMG00000003159-9960.769ENSMMOG00000018249rbms1a9960.256Mola_mola
ENSMAMG00000003159-9278.632ENSMODG00000005250RBMS18778.187Monodelphis_domestica
ENSMAMG00000003159-9963.846ENSMALG00000014235rbms1a9963.333Monopterus_albus
ENSMAMG00000003159-9687.368ENSMALG00000015715-10087.817Monopterus_albus
ENSMAMG00000003159-9971.223MGP_CAROLIEiJ_G0023586Rbms110070.309Mus_caroli
ENSMAMG00000003159-9971.223ENSMUSG00000026970Rbms110070.309Mus_musculus
ENSMAMG00000003159-9973.566MGP_PahariEiJ_G0025037Rbms110072.593Mus_pahari
ENSMAMG00000003159-9971.223MGP_SPRETEiJ_G0024508Rbms110070.309Mus_spretus
ENSMAMG00000003159-9272.752ENSMPUG00000000539RBMS18772.358Mustela_putorius_furo
ENSMAMG00000003159-9271.545ENSMLUG00000008762RBMS18871.159Myotis_lucifugus
ENSMAMG00000003159-10069.834ENSNGAG00000013636Rbms110069.359Nannospalax_galili
ENSMAMG00000003159-8865.130ENSNBRG00000020217rbms1a9564.841Neolamprologus_brichardi
ENSMAMG00000003159-9282.235ENSNBRG00000015151RBMS19482.235Neolamprologus_brichardi
ENSMAMG00000003159-9276.353ENSNLEG00000001667RBMS19575.637Nomascus_leucogenys
ENSMAMG00000003159-8466.770ENSMEUG00000000746RBMS110066.770Notamacropus_eugenii
ENSMAMG00000003159-9269.231ENSOPRG00000012431RBMS18768.839Ochotona_princeps
ENSMAMG00000003159-9275.783ENSODEG00000013934RBMS19572.087Octodon_degus
ENSMAMG00000003159-10085.823ENSONIG00000008934RBMS110085.823Oreochromis_niloticus
ENSMAMG00000003159-9965.128ENSONIG00000003329rbms1a9964.615Oreochromis_niloticus
ENSMAMG00000003159-9279.202ENSOANG00000006166RBMS18978.754Ornithorhynchus_anatinus
ENSMAMG00000003159-5553.191ENSOANG00000004477-9653.419Ornithorhynchus_anatinus
ENSMAMG00000003159-9276.068ENSOCUG00000017365RBMS18375.637Oryctolagus_cuniculus
ENSMAMG00000003159-10079.494ENSORLG00000016818RBMS19980.000Oryzias_latipes
ENSMAMG00000003159-9962.564ENSORLG00000003917rbms1a9962.051Oryzias_latipes
ENSMAMG00000003159-10079.494ENSORLG00020022335RBMS19980.000Oryzias_latipes_hni
ENSMAMG00000003159-9962.308ENSORLG00020018663rbms1a9961.795Oryzias_latipes_hni
ENSMAMG00000003159-10080.000ENSORLG00015018208RBMS19980.506Oryzias_latipes_hsok
ENSMAMG00000003159-9962.564ENSORLG00015016556rbms1a9962.051Oryzias_latipes_hsok
ENSMAMG00000003159-10080.457ENSOMEG00000002394RBMS19981.472Oryzias_melastigma
ENSMAMG00000003159-9275.921ENSOGAG00000002900RBMS19575.493Otolemur_garnettii
ENSMAMG00000003159-9275.783ENSOARG00000006870RBMS19571.698Ovis_aries
ENSMAMG00000003159-9276.353ENSPPAG00000040083RBMS19275.921Pan_paniscus
ENSMAMG00000003159-9273.504ENSPPAG00000036520-9373.088Pan_paniscus
ENSMAMG00000003159-9275.783ENSPPRG00000005040RBMS19575.071Panthera_pardus
ENSMAMG00000003159-9275.783ENSPTIG00000021240RBMS19575.071Panthera_tigris_altaica
ENSMAMG00000003159-9274.074ENSPTRG00000039358-9968.986Pan_troglodytes
ENSMAMG00000003159-9276.353ENSPTRG00000052304RBMS19275.921Pan_troglodytes
ENSMAMG00000003159-9276.353ENSPANG00000001383RBMS19275.921Papio_anubis
ENSMAMG00000003159-10076.650ENSPKIG00000012818rbms1a10076.650Paramormyrops_kingsleyae
ENSMAMG00000003159-10077.078ENSPKIG00000001498rbms1a10076.574Paramormyrops_kingsleyae
ENSMAMG00000003159-9278.632ENSPSIG00000010240RBMS18778.187Pelodiscus_sinensis
ENSMAMG00000003159-9960.256ENSPMGG00000004341rbms1a9959.744Periophthalmus_magnuspinnatus
ENSMAMG00000003159-8983.929ENSPMGG00000006310RBMS19677.650Periophthalmus_magnuspinnatus
ENSMAMG00000003159-9772.346ENSPEMG00000009449Rbms19870.976Peromyscus_maniculatus_bairdii
ENSMAMG00000003159-10075.556ENSPCIG00000018405RBMS110075.062Phascolarctos_cinereus
ENSMAMG00000003159-9964.103ENSPFOG00000016116rbms1a9963.590Poecilia_formosa
ENSMAMG00000003159-10083.544ENSPFOG00000017483RBMS110083.291Poecilia_formosa
ENSMAMG00000003159-9964.103ENSPLAG00000013864rbms1a9963.590Poecilia_latipinna
ENSMAMG00000003159-10084.010ENSPLAG00000000920RBMS110084.010Poecilia_latipinna
ENSMAMG00000003159-10083.544ENSPMEG00000015838RBMS110083.291Poecilia_mexicana
ENSMAMG00000003159-9964.103ENSPMEG00000016185rbms1a9963.590Poecilia_mexicana
ENSMAMG00000003159-10083.797ENSPREG00000008146RBMS110083.797Poecilia_reticulata
ENSMAMG00000003159-9964.103ENSPREG00000020161rbms1a9963.590Poecilia_reticulata
ENSMAMG00000003159-9272.752ENSPPYG00000012879-8772.358Pongo_abelii
ENSMAMG00000003159-9270.655ENSPCAG00000009673RBMS18770.255Procavia_capensis
ENSMAMG00000003159-9276.068ENSPCOG00000027294RBMS19575.354Propithecus_coquereli
ENSMAMG00000003159-9264.957ENSPVAG00000010429RBMS18764.589Pteropus_vampyrus
ENSMAMG00000003159-10084.557ENSPNYG00000002643RBMS110084.557Pundamilia_nyererei
ENSMAMG00000003159-9971.429ENSPNAG00000010225rbms1a9968.262Pygocentrus_nattereri
ENSMAMG00000003159-10080.556ENSPNAG00000023479RBMS110079.545Pygocentrus_nattereri
ENSMAMG00000003159-9176.369ENSRNOG00000008482Rbms19172.087Rattus_norvegicus
ENSMAMG00000003159-10070.784ENSRBIG00000044262RBMS110070.309Rhinopithecus_bieti
ENSMAMG00000003159-10071.021ENSRROG00000043108RBMS110070.546Rhinopithecus_roxellana
ENSMAMG00000003159-9276.353ENSSBOG00000034705RBMS19575.921Saimiri_boliviensis_boliviensis
ENSMAMG00000003159-9278.348ENSSHAG00000012271RBMS110072.464Sarcophilus_harrisii
ENSMAMG00000003159-10080.000ENSSFOG00015022929rbms110080.000Scleropages_formosus
ENSMAMG00000003159-9877.810ENSSFOG00015014493rbms1a9577.650Scleropages_formosus
ENSMAMG00000003159-10088.832ENSSMAG00000012152RBMS19688.832Scophthalmus_maximus
ENSMAMG00000003159-9066.764ENSSMAG00000012722rbms1a9466.764Scophthalmus_maximus
ENSMAMG00000003159-10089.620ENSSDUG00000018803RBMS110089.620Seriola_dumerili
ENSMAMG00000003159-9964.872ENSSDUG00000020602rbms1a9964.359Seriola_dumerili
ENSMAMG00000003159-9964.872ENSSLDG00000009495rbms1a9964.359Seriola_lalandi_dorsalis
ENSMAMG00000003159-10089.873ENSSLDG00000016556RBMS110089.873Seriola_lalandi_dorsalis
ENSMAMG00000003159-7575.000ENSSARG00000011085RBMS17174.242Sorex_araneus
ENSMAMG00000003159-9278.632ENSSPUG00000017163RBMS19478.187Sphenodon_punctatus
ENSMAMG00000003159-9964.872ENSSPAG00000005371rbms1a9964.359Stegastes_partitus
ENSMAMG00000003159-10089.620ENSSPAG00000000059RBMS110089.620Stegastes_partitus
ENSMAMG00000003159-9773.196ENSSSCG00000015888RBMS110072.840Sus_scrofa
ENSMAMG00000003159-9278.063ENSTGUG00000006606RBMS18777.620Taeniopygia_guttata
ENSMAMG00000003159-9963.359ENSTRUG00000017155rbms1a9962.850Takifugu_rubripes
ENSMAMG00000003159-10081.864ENSTRUG00000005466-10083.123Takifugu_rubripes
ENSMAMG00000003159-9884.097ENSTNIG00000016496RBMS19687.032Tetraodon_nigroviridis
ENSMAMG00000003159-9464.326ENSTNIG00000009477rbms1a9962.733Tetraodon_nigroviridis
ENSMAMG00000003159-9268.091ENSTBEG00000016156RBMS19367.705Tupaia_belangeri
ENSMAMG00000003159-9275.499ENSTTRG00000011058RBMS19375.071Tursiops_truncatus
ENSMAMG00000003159-9275.499ENSUAMG00000022331RBMS18775.071Ursus_americanus
ENSMAMG00000003159-9275.499ENSUMAG00000008605RBMS19175.071Ursus_maritimus
ENSMAMG00000003159-8678.834ENSVPAG00000002716RBMS18778.354Vicugna_pacos
ENSMAMG00000003159-9275.783ENSVVUG00000018682RBMS19575.354Vulpes_vulpes
ENSMAMG00000003159-9970.235ENSXETG00000016204rbms19571.629Xenopus_tropicalis
ENSMAMG00000003159-9961.282ENSXCOG00000001659rbms1a9960.769Xiphophorus_couchianus
ENSMAMG00000003159-9284.527ENSXCOG00000000211RBMS19485.014Xiphophorus_couchianus
ENSMAMG00000003159-9964.103ENSXMAG00000001802rbms1a9963.590Xiphophorus_maculatus
ENSMAMG00000003159-10083.291ENSXMAG00000011405RBMS110082.532Xiphophorus_maculatus

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