EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003208 (Gene tree)
Gene ID: 113141505
Gene Symbol: sept12
Alias: si:dkey-23a11.2
Full Name: neuronal-specific septin-3-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 106892 bases
Position: chrOOHQ01000092.1:2699424-2806315
Accession: 113141505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000004859	MMR_HSR1	PF01926.23	4e-08	1	1
ENSMAMP00000004841	MMR_HSR1	PF01926.23	7.9e-08	1	1
ENSMAMP00000004808	MMR_HSR1	PF01926.23	9.7e-08	1	1
ENSMAMP00000004828	MMR_HSR1	PF01926.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000004948	-	7405	-	ENSMAMP00000004828	917 (aa)	-	-
ENSMAMT00000004928	-	7501	-	ENSMAMP00000004808	949 (aa)	XP_026181739	UPI000E460622
ENSMAMT00000005012	-	1068	-	ENSMAMP00000004890	355 (aa)	-	-
ENSMAMT00000004979	-	5678	-	ENSMAMP00000004859	402 (aa)	XP_026181743	UPI000E457A1E
ENSMAMT00000004961	-	7450	-	ENSMAMP00000004841	870 (aa)	XP_026181740	UPI000E457838

Gene Model

Click here to download ENSMAMG00000003208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003208	sept12	74	40.268	ENSMAMG00000008748	sept8b	70	40.268
ENSMAMG00000003208	sept12	71	49.828	ENSMAMG00000020986	sept4a	55	49.828
ENSMAMG00000003208	sept12	71	48.958	ENSMAMG00000006704	sept5b	81	48.958
ENSMAMG00000003208	sept12	74	39.262	ENSMAMG00000019988	sept6	68	39.535
ENSMAMG00000003208	sept12	74	40.268	ENSMAMG00000021464	sept8a	69	40.268
ENSMAMG00000003208	sept12	76	47.059	ENSMAMG00000014467	zgc:63587	87	47.059
ENSMAMG00000003208	sept12	72	49.315	ENSMAMG00000004271	sept2	80	49.315
ENSMAMG00000003208	sept12	73	47.945	ENSMAMG00000001348	-	66	47.945
ENSMAMG00000003208	sept12	73	70.748	ENSMAMG00000004114	sept3	75	69.032
ENSMAMG00000003208	sept12	72	50.685	ENSMAMG00000014426	sept5a	78	50.685
ENSMAMG00000003208	sept12	80	70.807	ENSMAMG00000001672	sept9b	63	70.807
ENSMAMG00000003208	sept12	73	73.469	ENSMAMG00000023602	sept9a	81	73.469
ENSMAMG00000003208	sept12	65	51.136	ENSMAMG00000009320	SEPT4	79	51.136
ENSMAMG00000003208	sept12	73	47.945	ENSMAMG00000011379	sept7b	67	47.945
ENSMAMG00000003208	sept12	74	48.986	ENSMAMG00000013568	sept15	69	48.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003208	sept12	74	67.340	ENSG00000140623	SEPT12	83	67.340	Homo_sapiens
ENSMAMG00000003208	sept12	74	67.003	ENSAMEG00000001746	SEPT12	83	66.779	Ailuropoda_melanoleuca
ENSMAMG00000003208	sept12	100	82.152	ENSATEG00000007502	sept12	97	81.754	Anabas_testudineus
ENSMAMG00000003208	sept12	80	71.651	ENSACAG00000000531	-	93	71.651	Anolis_carolinensis
ENSMAMG00000003208	sept12	74	65.552	ENSANAG00000035914	SEPT12	83	65.552	Aotus_nancymaae
ENSMAMG00000003208	sept12	86	85.976	ENSAMXG00000013711	sept12	95	80.328	Astyanax_mexicanus
ENSMAMG00000003208	sept12	73	68.027	ENSBTAG00000016330	SEPT12	81	68.027	Bos_taurus
ENSMAMG00000003208	sept12	74	68.350	ENSCAFG00000019171	SEPT12	83	68.350	Canis_familiaris
ENSMAMG00000003208	sept12	74	58.586	ENSCAFG00020024938	SEPT12	92	63.498	Canis_lupus_dingo
ENSMAMG00000003208	sept12	73	67.687	ENSCHIG00000013270	SEPT12	83	67.687	Capra_hircus
ENSMAMG00000003208	sept12	74	65.657	ENSTSYG00000008537	SEPT12	82	65.657	Carlito_syrichta
ENSMAMG00000003208	sept12	72	65.636	ENSCAPG00000013691	SEPT12	80	65.636	Cavia_aperea
ENSMAMG00000003208	sept12	72	68.729	ENSCPOG00000011596	SEPT12	80	68.729	Cavia_porcellus
ENSMAMG00000003208	sept12	74	66.667	ENSCCAG00000021929	SEPT12	83	66.667	Cebus_capucinus
ENSMAMG00000003208	sept12	74	66.779	ENSCATG00000033120	SEPT12	83	67.003	Cercocebus_atys
ENSMAMG00000003208	sept12	72	68.729	ENSCLAG00000011397	SEPT12	80	68.729	Chinchilla_lanigera
ENSMAMG00000003208	sept12	74	48.882	ENSCSAG00000008975	SEPT12	83	49.045	Chlorocebus_sabaeus
ENSMAMG00000003208	sept12	81	74.383	ENSCPBG00000026556	SEPT12	94	74.383	Chrysemys_picta_bellii
ENSMAMG00000003208	sept12	72	51.368	ENSCSAVG00000001804	-	100	51.368	Ciona_savignyi
ENSMAMG00000003208	sept12	73	66.327	ENSCANG00000035476	SEPT12	83	65.436	Colobus_angolensis_palliatus
ENSMAMG00000003208	sept12	63	61.338	ENSCGRG00001012476	Sept12	83	61.338	Cricetulus_griseus_chok1gshd
ENSMAMG00000003208	sept12	63	61.338	ENSCGRG00000015421	Sept12	83	61.338	Cricetulus_griseus_crigri
ENSMAMG00000003208	sept12	84	83.776	ENSCSEG00000011498	sept12	100	80.387	Cynoglossus_semilaevis
ENSMAMG00000003208	sept12	92	87.805	ENSDARG00000019191	sept12	94	86.095	Danio_rerio
ENSMAMG00000003208	sept12	74	68.243	ENSDORG00000011984	Sept12	88	66.534	Dipodomys_ordii
ENSMAMG00000003208	sept12	75	55.000	ENSETEG00000016201	SEPT12	84	54.967	Echinops_telfairi
ENSMAMG00000003208	sept12	74	65.101	ENSEBUG00000008442	sept12	57	65.101	Eptatretus_burgeri
ENSMAMG00000003208	sept12	74	56.757	ENSEASG00005000570	SEPT12	86	62.273	Equus_asinus_asinus
ENSMAMG00000003208	sept12	74	65.657	ENSECAG00000018692	SEPT12	76	65.878	Equus_caballus
ENSMAMG00000003208	sept12	74	65.436	ENSFCAG00000029843	SEPT12	83	65.436	Felis_catus
ENSMAMG00000003208	sept12	82	72.810	ENSFALG00000004482	SEPT12	88	72.810	Ficedula_albicollis
ENSMAMG00000003208	sept12	61	66.260	ENSFDAG00000016066	SEPT12	87	64.940	Fukomys_damarensis
ENSMAMG00000003208	sept12	100	76.077	ENSFHEG00000008995	sept12	100	75.837	Fundulus_heteroclitus
ENSMAMG00000003208	sept12	74	83.165	ENSGMOG00000009662	sept12	96	83.165	Gadus_morhua
ENSMAMG00000003208	sept12	74	76.351	ENSGALG00000029027	SEPT12	85	76.351	Gallus_gallus
ENSMAMG00000003208	sept12	100	74.820	ENSGAFG00000005527	sept12	87	89.597	Gambusia_affinis
ENSMAMG00000003208	sept12	82	85.714	ENSGACG00000000503	sept12	97	85.714	Gasterosteus_aculeatus
ENSMAMG00000003208	sept12	81	71.865	ENSGAGG00000016756	SEPT12	93	71.865	Gopherus_agassizii
ENSMAMG00000003208	sept12	77	64.423	ENSGGOG00000007528	SEPT12	87	64.423	Gorilla_gorilla
ENSMAMG00000003208	sept12	72	68.385	ENSHGLG00000014562	SEPT12	82	68.385	Heterocephalus_glaber_female
ENSMAMG00000003208	sept12	72	68.385	ENSHGLG00100000756	SEPT12	82	68.385	Heterocephalus_glaber_male
ENSMAMG00000003208	sept12	89	83.486	ENSIPUG00000015361	sept12	99	75.781	Ictalurus_punctatus
ENSMAMG00000003208	sept12	73	68.493	ENSSTOG00000012312	SEPT12	82	68.493	Ictidomys_tridecemlineatus
ENSMAMG00000003208	sept12	67	65.799	ENSJJAG00000024267	Sept12	87	66.171	Jaculus_jaculus
ENSMAMG00000003208	sept12	99	74.515	ENSKMAG00000006409	sept12	100	85.000	Kryptolebias_marmoratus
ENSMAMG00000003208	sept12	88	83.853	ENSLBEG00000004076	sept12	99	83.853	Labrus_bergylta
ENSMAMG00000003208	sept12	89	83.537	ENSLOCG00000006723	sept12	94	83.537	Lepisosteus_oculatus
ENSMAMG00000003208	sept12	74	64.094	ENSLAFG00000030360	SEPT12	83	64.094	Loxodonta_africana
ENSMAMG00000003208	sept12	74	66.779	ENSMFAG00000043961	SEPT12	83	67.003	Macaca_fascicularis
ENSMAMG00000003208	sept12	74	66.779	ENSMLEG00000019167	SEPT12	83	67.003	Mandrillus_leucophaeus
ENSMAMG00000003208	sept12	74	76.351	ENSMGAG00000009617	SEPT12	88	76.351	Meleagris_gallopavo
ENSMAMG00000003208	sept12	74	67.785	ENSMAUG00000013139	Sept12	83	67.785	Mesocricetus_auratus
ENSMAMG00000003208	sept12	74	65.993	ENSMICG00000015913	SEPT12	83	65.772	Microcebus_murinus
ENSMAMG00000003208	sept12	74	68.919	ENSMOCG00000017045	Sept12	85	67.063	Microtus_ochrogaster
ENSMAMG00000003208	sept12	79	63.975	ENSMODG00000006197	SEPT12	90	63.975	Monodelphis_domestica
ENSMAMG00000003208	sept12	100	80.964	ENSMALG00000003054	sept12	99	89.157	Monopterus_albus
ENSMAMG00000003208	sept12	63	66.270	MGP_CAROLIEiJ_G0020416	Sept12	79	66.270	Mus_caroli
ENSMAMG00000003208	sept12	74	68.013	ENSMUSG00000022542	Sept12	90	66.534	Mus_musculus
ENSMAMG00000003208	sept12	63	65.873	MGP_PahariEiJ_G0016124	Sept12	79	65.873	Mus_pahari
ENSMAMG00000003208	sept12	63	66.270	MGP_SPRETEiJ_G0021310	Sept12	79	66.270	Mus_spretus
ENSMAMG00000003208	sept12	73	67.687	ENSMPUG00000014915	SEPT12	82	67.687	Mustela_putorius_furo
ENSMAMG00000003208	sept12	74	64.983	ENSMLUG00000003525	SEPT12	84	64.983	Myotis_lucifugus
ENSMAMG00000003208	sept12	74	67.340	ENSNGAG00000021915	Sept12	83	67.340	Nannospalax_galili
ENSMAMG00000003208	sept12	80	59.568	ENSNLEG00000009906	SEPT12	92	60.494	Nomascus_leucogenys
ENSMAMG00000003208	sept12	54	62.443	ENSMEUG00000003153	SEPT12	90	61.883	Notamacropus_eugenii
ENSMAMG00000003208	sept12	74	68.581	ENSODEG00000013145	SEPT12	81	69.759	Octodon_degus
ENSMAMG00000003208	sept12	74	65.101	ENSOCUG00000008343	SEPT12	83	65.101	Oryctolagus_cuniculus
ENSMAMG00000003208	sept12	81	86.544	ENSORLG00000019251	-	96	86.544	Oryzias_latipes
ENSMAMG00000003208	sept12	100	73.464	ENSORLG00015007797	-	97	86.728	Oryzias_latipes_hsok
ENSMAMG00000003208	sept12	100	73.956	ENSOMEG00000002676	-	99	73.508	Oryzias_melastigma
ENSMAMG00000003208	sept12	74	68.013	ENSOGAG00000025966	SEPT12	83	68.013	Otolemur_garnettii
ENSMAMG00000003208	sept12	73	67.347	ENSOARG00000003930	SEPT12	83	67.347	Ovis_aries
ENSMAMG00000003208	sept12	74	67.340	ENSPPAG00000033910	SEPT12	83	67.340	Pan_paniscus
ENSMAMG00000003208	sept12	74	55.705	ENSPPRG00000006622	SEPT12	81	55.705	Panthera_pardus
ENSMAMG00000003208	sept12	74	65.436	ENSPTIG00000015526	SEPT12	83	65.436	Panthera_tigris_altaica
ENSMAMG00000003208	sept12	74	67.340	ENSPTRG00000007728	SEPT12	83	67.340	Pan_troglodytes
ENSMAMG00000003208	sept12	74	66.779	ENSPANG00000022807	SEPT12	83	67.003	Papio_anubis
ENSMAMG00000003208	sept12	75	82.178	ENSPKIG00000009934	-	88	82.178	Paramormyrops_kingsleyae
ENSMAMG00000003208	sept12	86	78.221	ENSPKIG00000019480	sept12	87	78.221	Paramormyrops_kingsleyae
ENSMAMG00000003208	sept12	73	62.373	ENSPSIG00000014795	SEPT12	84	63.051	Pelodiscus_sinensis
ENSMAMG00000003208	sept12	78	78.025	ENSPMGG00000019506	-	100	71.287	Periophthalmus_magnuspinnatus
ENSMAMG00000003208	sept12	79	64.174	ENSPCIG00000026671	SEPT12	90	64.174	Phascolarctos_cinereus
ENSMAMG00000003208	sept12	100	75.426	ENSPFOG00000015822	sept12	97	85.757	Poecilia_formosa
ENSMAMG00000003208	sept12	100	75.426	ENSPLAG00000004719	sept12	94	87.730	Poecilia_latipinna
ENSMAMG00000003208	sept12	100	75.426	ENSPMEG00000022516	sept12	94	87.730	Poecilia_mexicana
ENSMAMG00000003208	sept12	79	63.889	ENSPCOG00000014037	SEPT12	90	64.087	Propithecus_coquereli
ENSMAMG00000003208	sept12	74	67.677	ENSPVAG00000016080	SEPT12	79	67.677	Pteropus_vampyrus
ENSMAMG00000003208	sept12	81	86.890	ENSPNAG00000026381	sept12	95	80.874	Pygocentrus_nattereri
ENSMAMG00000003208	sept12	74	67.677	ENSRNOG00000003137	Sept12	83	67.450	Rattus_norvegicus
ENSMAMG00000003208	sept12	74	65.436	ENSRBIG00000024546	SEPT12	83	65.657	Rhinopithecus_bieti
ENSMAMG00000003208	sept12	74	65.772	ENSRROG00000028781	SEPT12	83	65.993	Rhinopithecus_roxellana
ENSMAMG00000003208	sept12	73	67.458	ENSSBOG00000036170	SEPT12	82	67.458	Saimiri_boliviensis_boliviensis
ENSMAMG00000003208	sept12	79	64.286	ENSSHAG00000007036	SEPT12	88	64.286	Sarcophilus_harrisii
ENSMAMG00000003208	sept12	92	70.461	ENSSFOG00015010148	-	100	70.461	Scleropages_formosus
ENSMAMG00000003208	sept12	86	81.595	ENSSFOG00015023684	sept12	91	81.595	Scleropages_formosus
ENSMAMG00000003208	sept12	100	78.345	ENSSMAG00000015399	sept12	99	77.830	Scophthalmus_maximus
ENSMAMG00000003208	sept12	100	81.205	ENSSDUG00000018368	sept12	100	73.223	Seriola_dumerili
ENSMAMG00000003208	sept12	81	72.308	ENSSPUG00000009703	SEPT12	94	72.308	Sphenodon_punctatus
ENSMAMG00000003208	sept12	73	71.812	ENSTGUG00000003705	SEPT12	99	71.812	Taeniopygia_guttata
ENSMAMG00000003208	sept12	99	73.594	ENSTRUG00000021364	sept12	94	72.406	Takifugu_rubripes
ENSMAMG00000003208	sept12	74	66.443	ENSTTRG00000005489	SEPT12	79	66.443	Tursiops_truncatus
ENSMAMG00000003208	sept12	74	57.239	ENSUMAG00000002994	SEPT12	86	67.347	Ursus_maritimus
ENSMAMG00000003208	sept12	50	61.386	ENSVPAG00000010635	-	76	61.386	Vicugna_pacos
ENSMAMG00000003208	sept12	74	68.350	ENSVVUG00000016536	SEPT12	83	68.350	Vulpes_vulpes
ENSMAMG00000003208	sept12	79	70.533	ENSXETG00000009151	sept12	97	70.533	Xenopus_tropicalis
ENSMAMG00000003208	sept12	82	86.747	ENSXCOG00000007643	sept12	93	86.747	Xiphophorus_couchianus
ENSMAMG00000003208	sept12	100	74.939	ENSXMAG00000012528	sept12	97	74.359	Xiphophorus_maculatus