EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000003269 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7182 bases
Position: chrOOHQ01000044.1:12111270-12118451
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000004863	Gar1	PF04410.14	2.7e-41	1	1
ENSMAMP00000004842	Gar1	PF04410.14	5.2e-41	1	1
ENSMAMP00000004860	Gar1	PF04410.14	5.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000004984	-	1323	-	ENSMAMP00000004863	298 (aa)	-	-
ENSMAMT00000004980	-	2779	-	ENSMAMP00000004860	329 (aa)	-	-
ENSMAMT00000004962	-	2925	-	ENSMAMP00000004842	329 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003269	-	77	46.388	ENSG00000145414	NAF1	95	62.500	Homo_sapiens
ENSMAMG00000003269	-	92	74.368	ENSAPOG00000007663	-	72	74.061	Acanthochromis_polyacanthus
ENSMAMG00000003269	-	92	74.729	ENSAOCG00000003518	-	73	74.074	Amphiprion_ocellaris
ENSMAMG00000003269	-	92	75.090	ENSAPEG00000004453	-	72	74.747	Amphiprion_percula
ENSMAMG00000003269	-	89	75.338	ENSATEG00000003514	-	70	73.333	Anabas_testudineus
ENSMAMG00000003269	-	79	45.455	ENSANAG00000025253	NAF1	93	62.500	Aotus_nancymaae
ENSMAMG00000003269	-	92	67.029	ENSACLG00000017092	-	70	65.781	Astatotilapia_calliptera
ENSMAMG00000003269	-	79	42.532	ENSCJAG00000012406	NAF1	95	62.500	Callithrix_jacchus
ENSMAMG00000003269	-	79	44.948	ENSTSYG00000005946	NAF1	84	63.889	Carlito_syrichta
ENSMAMG00000003269	-	55	61.212	ENSCCAG00000030023	NAF1	95	62.500	Cebus_capucinus
ENSMAMG00000003269	-	71	48.560	ENSCATG00000022663	NAF1	95	62.500	Cercocebus_atys
ENSMAMG00000003269	-	80	43.772	ENSCLAG00000017209	NAF1	52	45.679	Chinchilla_lanigera
ENSMAMG00000003269	-	92	43.359	ENSCPBG00000003379	NAF1	77	43.243	Chrysemys_picta_bellii
ENSMAMG00000003269	-	71	48.560	ENSCANG00000039151	NAF1	95	62.500	Colobus_angolensis_palliatus
ENSMAMG00000003269	-	86	62.671	ENSCSEG00000010914	-	50	66.949	Cynoglossus_semilaevis
ENSMAMG00000003269	-	89	57.239	ENSCVAG00000003483	-	88	55.442	Cyprinodon_variegatus
ENSMAMG00000003269	-	84	45.070	ENSDORG00000011327	Naf1	53	46.862	Dipodomys_ordii
ENSMAMG00000003269	-	50	58.784	ENSEEUG00000008335	-	51	59.740	Erinaceus_europaeus
ENSMAMG00000003269	-	98	65.636	ENSFHEG00000015835	-	63	63.455	Fundulus_heteroclitus
ENSMAMG00000003269	-	91	67.033	ENSGAFG00000017883	-	54	67.033	Gambusia_affinis
ENSMAMG00000003269	-	74	62.832	ENSGACG00000016383	-	100	61.062	Gasterosteus_aculeatus
ENSMAMG00000003269	-	77	46.388	ENSGGOG00000000894	NAF1	95	62.500	Gorilla_gorilla
ENSMAMG00000003269	-	92	67.391	ENSHBUG00000002404	-	95	62.458	Haplochromis_burtoni
ENSMAMG00000003269	-	82	65.041	ENSHCOG00000001581	-	73	55.973	Hippocampus_comes
ENSMAMG00000003269	-	86	69.366	ENSKMAG00000005434	-	60	62.626	Kryptolebias_marmoratus
ENSMAMG00000003269	-	99	70.530	ENSLBEG00000020414	-	71	70.199	Labrus_bergylta
ENSMAMG00000003269	-	81	45.263	ENSMFAG00000040952	NAF1	95	62.500	Macaca_fascicularis
ENSMAMG00000003269	-	71	48.560	ENSMMUG00000001717	NAF1	95	62.500	Macaca_mulatta
ENSMAMG00000003269	-	81	45.263	ENSMNEG00000032677	NAF1	95	62.500	Macaca_nemestrina
ENSMAMG00000003269	-	71	48.560	ENSMLEG00000035330	NAF1	95	62.500	Mandrillus_leucophaeus
ENSMAMG00000003269	-	89	70.234	ENSMZEG00005005830	-	73	66.555	Maylandia_zebra
ENSMAMG00000003269	-	59	54.396	ENSMGAG00000002133	NAF1	55	55.429	Meleagris_gallopavo
ENSMAMG00000003269	-	79	44.286	ENSMICG00000038661	NAF1	84	61.111	Microcebus_murinus
ENSMAMG00000003269	-	68	83.193	ENSMMOG00000016895	-	57	59.091	Mola_mola
ENSMAMG00000003269	-	98	80.000	ENSMALG00000018482	-	59	80.000	Monopterus_albus
ENSMAMG00000003269	-	82	64.777	ENSNBRG00000009348	-	99	63.968	Neolamprologus_brichardi
ENSMAMG00000003269	-	63	55.779	ENSNLEG00000006459	-	95	62.500	Nomascus_leucogenys
ENSMAMG00000003269	-	74	74.180	ENSONIG00000001826	-	85	69.231	Oreochromis_niloticus
ENSMAMG00000003269	-	98	64.453	ENSOMEG00000021322	-	54	64.706	Oryzias_melastigma
ENSMAMG00000003269	-	77	46.388	ENSPPAG00000034674	NAF1	95	62.500	Pan_paniscus
ENSMAMG00000003269	-	77	46.388	ENSPTRG00000016560	NAF1	95	62.500	Pan_troglodytes
ENSMAMG00000003269	-	81	45.263	ENSPANG00000015574	NAF1	95	62.500	Papio_anubis
ENSMAMG00000003269	-	75	43.416	ENSPSIG00000006545	NAF1	61	47.186	Pelodiscus_sinensis
ENSMAMG00000003269	-	95	66.549	ENSPFOG00000010705	-	67	64.919	Poecilia_formosa
ENSMAMG00000003269	-	97	66.667	ENSPLAG00000002200	-	55	66.667	Poecilia_latipinna
ENSMAMG00000003269	-	95	66.549	ENSPMEG00000004437	-	55	65.926	Poecilia_mexicana
ENSMAMG00000003269	-	97	66.667	ENSPREG00000022551	-	59	66.323	Poecilia_reticulata
ENSMAMG00000003269	-	88	63.636	ENSPNYG00000021456	-	78	60.076	Pundamilia_nyererei
ENSMAMG00000003269	-	81	45.070	ENSRBIG00000030027	NAF1	95	62.500	Rhinopithecus_bieti
ENSMAMG00000003269	-	81	45.263	ENSRROG00000040912	NAF1	95	62.500	Rhinopithecus_roxellana
ENSMAMG00000003269	-	63	55.276	ENSSBOG00000002085	NAF1	95	62.500	Saimiri_boliviensis_boliviensis
ENSMAMG00000003269	-	93	50.515	ENSSFOG00015014207	naf1	56	49.315	Scleropages_formosus
ENSMAMG00000003269	-	97	72.318	ENSSMAG00000015529	-	75	71.104	Scophthalmus_maximus
ENSMAMG00000003269	-	97	78.966	ENSSDUG00000005987	-	70	81.034	Seriola_dumerili
ENSMAMG00000003269	-	97	63.077	ENSSLDG00000019761	-	70	65.538	Seriola_lalandi_dorsalis
ENSMAMG00000003269	-	61	50.000	ENSSARG00000006627	-	53	52.071	Sorex_araneus
ENSMAMG00000003269	-	58	60.112	ENSSPUG00000004087	NAF1	60	58.960	Sphenodon_punctatus
ENSMAMG00000003269	-	51	55.921	ENSTGUG00000005798	NAF1	82	55.921	Taeniopygia_guttata
ENSMAMG00000003269	-	87	67.241	ENSTRUG00000011908	-	61	71.681	Takifugu_rubripes
ENSMAMG00000003269	-	67	47.598	ENSVPAG00000007182	-	67	57.396	Vicugna_pacos
ENSMAMG00000003269	-	92	45.548	ENSVVUG00000022303	NAF1	50	57.923	Vulpes_vulpes
ENSMAMG00000003269	-	76	62.000	ENSXCOG00000013058	-	53	81.132	Xiphophorus_couchianus
ENSMAMG00000003269	-	97	68.729	ENSXMAG00000011494	-	56	67.778	Xiphophorus_maculatus