EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000003351 (Gene tree)
Gene ID
113124744
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
12538 bases
Position
chrOOHQ01000107.1:12633268-12645805
Accession
113124744
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000005143RNA_pol_Rpb1_5PF04998.171.9e-10111
ENSMAMP00000005098RNA_pol_Rpb1_5PF04998.172.1e-10111
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28133
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28233
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28333
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28433
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28533
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28633
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28733
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28833
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-28933
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281033
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281133
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281233
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281333
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281433
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281533
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281633
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281733
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281833
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-281933
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282033
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282133
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282233
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282333
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282433
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282533
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282633
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282733
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282833
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-282933
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-283033
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-283133
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-283233
ENSMAMP00000005143RNA_pol_Rpb1_RPF05001.132.3e-283333
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23132
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23232
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23332
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23432
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23532
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23632
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23732
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23832
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-23932
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231032
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231132
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231232
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231332
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231432
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231532
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231632
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231732
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231832
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-231932
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232032
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232132
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232232
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232332
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232432
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232532
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232632
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232732
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232832
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-232932
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-233032
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-233132
ENSMAMP00000005098RNA_pol_Rpb1_RPF05001.131.1e-233232
ENSMAMP00000005098RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSMAMP00000005143RNA_pol_Rpb1_4PF05000.171.3e-3711
ENSMAMP00000005143RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSMAMP00000005098RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSMAMP00000005098RNA_pol_Rpb1_3PF04983.185e-5011
ENSMAMP00000005143RNA_pol_Rpb1_3PF04983.185.3e-5011
ENSMAMP00000005098RNA_pol_Rpb1_1PF04997.124.3e-10811
ENSMAMP00000005143RNA_pol_Rpb1_1PF04997.124.3e-10811
ENSMAMP00000005098RNA_pol_Rpb1_7PF04990.126.9e-5511
ENSMAMP00000005143RNA_pol_Rpb1_7PF04990.124.2e-3511
ENSMAMP00000005098RNA_pol_Rpb1_6PF04992.143.6e-6811
ENSMAMP00000005143RNA_pol_Rpb1_6PF04992.144.1e-6811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000005230-8709XM_026297836ENSMAMP000000050981966 (aa)XP_026153621UPI000E45F1E4
ENSMAMT00000005278-5823-ENSMAMP000000051431940 (aa)--
Gene Model
Click here to download ENSMAMG00000003351's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003351's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000003351polr2a6638.328ENSMAMG00000017497polr3a9138.495
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000003351polr2a8798.697ENSAPOG00000006552polr2a9098.697Acanthochromis_polyacanthus
ENSMAMG00000003351polr2a8293.928ENSAMEG00000016265-8293.936Ailuropoda_melanoleuca
ENSMAMG00000003351polr2a10096.236ENSACIG00000015982polr2a10096.745Amphilophus_citrinellus
ENSMAMG00000003351polr2a9894.118ENSAOCG00000004255polr2a9396.402Amphiprion_ocellaris
ENSMAMG00000003351polr2a10099.034ENSAPEG00000012623polr2a10099.034Amphiprion_percula
ENSMAMG00000003351polr2a10098.830ENSATEG00000019644polr2a10098.830Anabas_testudineus
ENSMAMG00000003351polr2a8294.845ENSACAG00000014561POLR2A8294.851Anolis_carolinensis
ENSMAMG00000003351polr2a8294.289ENSANAG00000020093-8294.296Aotus_nancymaae
ENSMAMG00000003351polr2a10098.474ENSACLG00000006735polr2a10098.474Astatotilapia_calliptera
ENSMAMG00000003351polr2a10097.558ENSAMXG00000020046polr2a10097.558Astyanax_mexicanus
ENSMAMG00000003351polr2a8294.289ENSBTAG00000046765POLR2A8294.296Bos_taurus
ENSMAMG00000003351polr2a9871.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSMAMG00000003351polr2a8694.227ENSCAFG00000016532POLR2A9994.234Canis_familiaris
ENSMAMG00000003351polr2a8293.362ENSCAFG00020007929-8293.371Canis_lupus_dingo
ENSMAMG00000003351polr2a8294.289ENSCHIG00000027173-8294.296Capra_hircus
ENSMAMG00000003351polr2a9093.605ENSTSYG00000012803-8591.584Carlito_syrichta
ENSMAMG00000003351polr2a9890.828ENSCAPG00000001882-10093.363Cavia_aperea
ENSMAMG00000003351polr2a9988.713ENSCPOG00000014812-10093.118Cavia_porcellus
ENSMAMG00000003351polr2a8294.289ENSCCAG00000020938-8294.296Cebus_capucinus
ENSMAMG00000003351polr2a8294.289ENSCATG00000013680-8294.296Cercocebus_atys
ENSMAMG00000003351polr2a8294.165ENSCLAG00000012196-8294.172Chinchilla_lanigera
ENSMAMG00000003351polr2a8285.503ENSCSAG00000011644-8285.521Chlorocebus_sabaeus
ENSMAMG00000003351polr2a9183.899ENSCPBG00000012697POLR2A9490.732Chrysemys_picta_bellii
ENSMAMG00000003351polr2a9876.792ENSCING00000007884-9977.351Ciona_intestinalis
ENSMAMG00000003351polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSMAMG00000003351polr2a8293.606ENSCANG00000010622-8293.614Colobus_angolensis_palliatus
ENSMAMG00000003351polr2a8287.953ENSCGRG00001003538Polr2a8187.968Cricetulus_griseus_chok1gshd
ENSMAMG00000003351polr2a8290.552ENSCGRG00000012105Polr2a9390.564Cricetulus_griseus_crigri
ENSMAMG00000003351polr2a9997.761ENSCSEG00000002635polr2a10097.761Cynoglossus_semilaevis
ENSMAMG00000003351polr2a10098.474ENSCVAG00000005156polr2a10098.474Cyprinodon_variegatus
ENSMAMG00000003351polr2a10097.306ENSDARG00000099966polr2a10097.306Danio_rerio
ENSMAMG00000003351polr2a8291.496ENSDNOG00000016482-8291.507Dasypus_novemcinctus
ENSMAMG00000003351polr2a8294.289ENSDORG00000008667Polr2a8294.296Dipodomys_ordii
ENSMAMG00000003351polr2a9970.148FBgn0003277RpII2159875.280Drosophila_melanogaster
ENSMAMG00000003351polr2a9489.919ENSETEG00000002540-8791.010Echinops_telfairi
ENSMAMG00000003351polr2a8287.648ENSEBUG00000013967polr2a8287.632Eptatretus_burgeri
ENSMAMG00000003351polr2a8292.303ENSEASG00005019114-8392.312Equus_asinus_asinus
ENSMAMG00000003351polr2a8294.289ENSECAG00000018485POLR2A8294.296Equus_caballus
ENSMAMG00000003351polr2a8394.192ENSEEUG00000001154-9594.192Erinaceus_europaeus
ENSMAMG00000003351polr2a8992.109ENSELUG00000014284polr2a8492.787Esox_lucius
ENSMAMG00000003351polr2a8294.351ENSFDAG00000008287-8294.358Fukomys_damarensis
ENSMAMG00000003351polr2a9998.225ENSFHEG00000001768polr2a10098.225Fundulus_heteroclitus
ENSMAMG00000003351polr2a9992.651ENSGMOG00000007725polr2a10092.676Gadus_morhua
ENSMAMG00000003351polr2a99100.000ENSGAFG00000005389polr2a10093.618Gambusia_affinis
ENSMAMG00000003351polr2a9994.256ENSGACG00000019366polr2a10094.035Gasterosteus_aculeatus
ENSMAMG00000003351polr2a8292.198ENSGGOG00000014800-9692.690Gorilla_gorilla
ENSMAMG00000003351polr2a9998.426ENSHBUG00000018937polr2a10098.426Haplochromis_burtoni
ENSMAMG00000003351polr2a8294.351ENSHGLG00000012381POLR2A8294.358Heterocephalus_glaber_female
ENSMAMG00000003351polr2a8294.351ENSHGLG00100014843POLR2A8294.358Heterocephalus_glaber_male
ENSMAMG00000003351polr2a10097.762ENSHCOG00000011874polr2a10097.762Hippocampus_comes
ENSMAMG00000003351polr2a10097.304ENSIPUG00000002613Polr2a10097.304Ictalurus_punctatus
ENSMAMG00000003351polr2a8294.289ENSSTOG00000001304-8294.296Ictidomys_tridecemlineatus
ENSMAMG00000003351polr2a8294.289ENSJJAG00000013049Polr2a8294.296Jaculus_jaculus
ENSMAMG00000003351polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSMAMG00000003351polr2a9998.626ENSLBEG00000027652polr2a10098.626Labrus_bergylta
ENSMAMG00000003351polr2a8085.515ENSLACG00000012071POLR2A8185.588Latimeria_chalumnae
ENSMAMG00000003351polr2a8996.975ENSLOCG00000013863polr2a9796.524Lepisosteus_oculatus
ENSMAMG00000003351polr2a9991.059ENSLAFG00000008626-9794.296Loxodonta_africana
ENSMAMG00000003351polr2a5092.952ENSMFAG00000007042-9992.952Macaca_fascicularis
ENSMAMG00000003351polr2a8294.289ENSMMUG00000023620-9194.296Macaca_mulatta
ENSMAMG00000003351polr2a8293.855ENSMNEG00000040407-8293.862Macaca_nemestrina
ENSMAMG00000003351polr2a8089.873ENSMLEG00000030263-9992.952Mandrillus_leucophaeus
ENSMAMG00000003351polr2a10098.474ENSMZEG00005021429polr2a10098.474Maylandia_zebra
ENSMAMG00000003351polr2a5193.782ENSMAUG00000021055-9993.782Mesocricetus_auratus
ENSMAMG00000003351polr2a8294.227ENSMICG00000013372-9893.347Microcebus_murinus
ENSMAMG00000003351polr2a9989.777ENSMOCG00000018279Polr2a10089.988Microtus_ochrogaster
ENSMAMG00000003351polr2a9097.643ENSMMOG00000012515polr2a9297.643Mola_mola
ENSMAMG00000003351polr2a8294.103ENSMODG00000007009-8294.110Monodelphis_domestica
ENSMAMG00000003351polr2a9495.601ENSMALG00000008716polr2a9996.216Monopterus_albus
ENSMAMG00000003351polr2a8294.289MGP_CAROLIEiJ_G0016587Polr2a8294.296Mus_caroli
ENSMAMG00000003351polr2a8294.289ENSMUSG00000005198Polr2a8294.296Mus_musculus
ENSMAMG00000003351polr2a8292.151MGP_PahariEiJ_G0017718Polr2a8292.160Mus_pahari
ENSMAMG00000003351polr2a8294.289MGP_SPRETEiJ_G0017423Polr2a8294.296Mus_spretus
ENSMAMG00000003351polr2a8294.289ENSMPUG00000009648-8294.296Mustela_putorius_furo
ENSMAMG00000003351polr2a8293.800ENSMLUG00000009088-8293.808Myotis_lucifugus
ENSMAMG00000003351polr2a8294.289ENSNGAG00000002543Polr2a8294.296Nannospalax_galili
ENSMAMG00000003351polr2a10096.083ENSNBRG00000002005polr2a10096.541Neolamprologus_brichardi
ENSMAMG00000003351polr2a8292.817ENSNLEG00000009460-8292.826Nomascus_leucogenys
ENSMAMG00000003351polr2a9494.989ENSMEUG00000008611-9686.580Notamacropus_eugenii
ENSMAMG00000003351polr2a8093.999ENSOPRG00000015116-9993.999Ochotona_princeps
ENSMAMG00000003351polr2a8794.188ENSODEG00000017674-8589.827Octodon_degus
ENSMAMG00000003351polr2a10098.627ENSONIG00000009231polr2a10098.627Oreochromis_niloticus
ENSMAMG00000003351polr2a9990.230ENSOCUG00000017929-10094.172Oryctolagus_cuniculus
ENSMAMG00000003351polr2a10098.220ENSORLG00000006431polr2a10098.220Oryzias_latipes
ENSMAMG00000003351polr2a10098.220ENSORLG00020010235polr2a10098.220Oryzias_latipes_hni
ENSMAMG00000003351polr2a10098.118ENSORLG00015007075polr2a10098.118Oryzias_latipes_hsok
ENSMAMG00000003351polr2a9297.884ENSOMEG00000010713polr2a10097.884Oryzias_melastigma
ENSMAMG00000003351polr2a8294.289ENSOGAG00000033608-8294.296Otolemur_garnettii
ENSMAMG00000003351polr2a9194.289ENSOARG00000013874-8594.296Ovis_aries
ENSMAMG00000003351polr2a8191.818ENSPPAG00000043734-8291.692Pan_paniscus
ENSMAMG00000003351polr2a8292.817ENSPTRG00000008691POLR2A8292.826Pan_troglodytes
ENSMAMG00000003351polr2a8293.606ENSPANG00000024099-8293.614Papio_anubis
ENSMAMG00000003351polr2a7795.495ENSPKIG00000005727polr2a8595.471Paramormyrops_kingsleyae
ENSMAMG00000003351polr2a9892.710ENSPSIG00000014006POLR2A10092.627Pelodiscus_sinensis
ENSMAMG00000003351polr2a10097.931ENSPMGG00000019734polr2a10097.931Periophthalmus_magnuspinnatus
ENSMAMG00000003351polr2a8294.289ENSPEMG00000012521Polr2a8294.296Peromyscus_maniculatus_bairdii
ENSMAMG00000003351polr2a8694.107ENSPCIG00000028851-8294.107Phascolarctos_cinereus
ENSMAMG00000003351polr2a9998.470ENSPFOG00000007890polr2a9998.470Poecilia_formosa
ENSMAMG00000003351polr2a9998.470ENSPLAG00000007399polr2a9998.470Poecilia_latipinna
ENSMAMG00000003351polr2a9998.470ENSPMEG00000002071polr2a9998.470Poecilia_mexicana
ENSMAMG00000003351polr2a10098.474ENSPREG00000013122polr2a10098.474Poecilia_reticulata
ENSMAMG00000003351polr2a8294.289ENSPPYG00000007924-8294.296Pongo_abelii
ENSMAMG00000003351polr2a7494.868ENSPCAG00000006951-7494.868Procavia_capensis
ENSMAMG00000003351polr2a8292.989ENSPCOG00000025260-8292.998Propithecus_coquereli
ENSMAMG00000003351polr2a8293.979ENSPVAG00000005069-8293.986Pteropus_vampyrus
ENSMAMG00000003351polr2a10098.423ENSPNYG00000022340polr2a10098.423Pundamilia_nyererei
ENSMAMG00000003351polr2a10097.711ENSPNAG00000011237polr2a10097.711Pygocentrus_nattereri
ENSMAMG00000003351polr2a8294.227ENSRNOG00000028834Polr2a8294.234Rattus_norvegicus
ENSMAMG00000003351polr2a8293.917ENSRBIG00000002471-9193.924Rhinopithecus_bieti
ENSMAMG00000003351polr2a8294.289ENSRROG00000029583-8993.428Rhinopithecus_roxellana
ENSMAMG00000003351polr2a8250.214YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSMAMG00000003351polr2a8294.289ENSSBOG00000000808-8294.296Saimiri_boliviensis_boliviensis
ENSMAMG00000003351polr2a9394.103ENSSHAG00000002858-8494.110Sarcophilus_harrisii
ENSMAMG00000003351polr2a9997.510ENSSFOG00015023275polr2a10097.510Scleropages_formosus
ENSMAMG00000003351polr2a8297.891ENSSMAG00000009137polr2a8297.891Scophthalmus_maximus
ENSMAMG00000003351polr2a10099.288ENSSDUG00000020466polr2a10099.288Seriola_dumerili
ENSMAMG00000003351polr2a10099.237ENSSLDG00000020613polr2a10099.237Seriola_lalandi_dorsalis
ENSMAMG00000003351polr2a9589.892ENSSARG00000005875-9990.706Sorex_araneus
ENSMAMG00000003351polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSMAMG00000003351polr2a8293.358ENSSSCG00000028278-8293.366Sus_scrofa
ENSMAMG00000003351polr2a9892.436ENSTRUG00000012320polr2a8192.436Takifugu_rubripes
ENSMAMG00000003351polr2a9296.650ENSTNIG00000010136polr2a10096.650Tetraodon_nigroviridis
ENSMAMG00000003351polr2a7494.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSMAMG00000003351polr2a8292.613ENSTTRG00000014273-8292.622Tursiops_truncatus
ENSMAMG00000003351polr2a9293.870ENSUAMG00000014866-10091.342Ursus_americanus
ENSMAMG00000003351polr2a7491.524ENSUMAG00000015732-8391.061Ursus_maritimus
ENSMAMG00000003351polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSMAMG00000003351polr2a8294.227ENSVVUG00000027878-8394.234Vulpes_vulpes
ENSMAMG00000003351polr2a8194.336ENSXETG00000012465polr2a8294.343Xenopus_tropicalis
ENSMAMG00000003351polr2a9295.946ENSXCOG00000001804polr2a10095.480Xiphophorus_couchianus
ENSMAMG00000003351polr2a10098.423ENSXMAG00000015687polr2a10098.423Xiphophorus_maculatus

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