EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003357 (Gene tree)
Gene ID: 113129114
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 10146 bases
Position: chrOOHQ01000036.1:11534900-11545045
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000004980	RRM_5	PF13893.6	2.7e-06	1	1
ENSMAMP00000004980	RRM_1	PF00076.22	6.9e-14	1	1
ENSMAMP00000004980	SAP	PF02037.27	5.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005108	-	5477	-	ENSMAMP00000004980	914 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003357	safb	76	36.632	ENSMAMG00000021391	sltm	74	37.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003357	safb	60	40.968	ENSG00000160633	SAFB	78	62.295	Homo_sapiens
ENSMAMG00000003357	safb	91	85.424	ENSAPOG00000022508	safb	100	85.663	Acanthochromis_polyacanthus
ENSMAMG00000003357	safb	61	41.417	ENSAMEG00000012254	SAFB	97	40.847	Ailuropoda_melanoleuca
ENSMAMG00000003357	safb	90	77.576	ENSACIG00000006247	safb	100	76.364	Amphilophus_citrinellus
ENSMAMG00000003357	safb	87	84.731	ENSAOCG00000006308	safb	100	84.731	Amphiprion_ocellaris
ENSMAMG00000003357	safb	91	84.946	ENSAPEG00000023342	safb	100	85.185	Amphiprion_percula
ENSMAMG00000003357	safb	91	86.364	ENSATEG00000004998	safb	100	86.603	Anabas_testudineus
ENSMAMG00000003357	safb	55	39.510	ENSAPLG00000005780	-	98	44.131	Anas_platyrhynchos
ENSMAMG00000003357	safb	54	43.986	ENSAPLG00000006355	-	100	49.063	Anas_platyrhynchos
ENSMAMG00000003357	safb	60	42.581	ENSANAG00000028821	SAFB	95	41.694	Aotus_nancymaae
ENSMAMG00000003357	safb	91	78.665	ENSACLG00000001926	safb	100	79.142	Astatotilapia_calliptera
ENSMAMG00000003357	safb	89	63.015	ENSAMXG00000018154	safb	99	62.642	Astyanax_mexicanus
ENSMAMG00000003357	safb	89	43.601	ENSBTAG00000007875	SAFB	97	42.208	Bos_taurus
ENSMAMG00000003357	safb	61	42.122	ENSCAFG00000018803	SAFB	83	41.514	Canis_familiaris
ENSMAMG00000003357	safb	61	42.122	ENSCAFG00020018943	SAFB	95	41.514	Canis_lupus_dingo
ENSMAMG00000003357	safb	89	43.506	ENSCHIG00000007262	SAFB	97	41.139	Capra_hircus
ENSMAMG00000003357	safb	60	42.444	ENSCCAG00000020193	SAFB	95	41.694	Cebus_capucinus
ENSMAMG00000003357	safb	60	41.286	ENSCATG00000029994	SAFB	95	41.087	Cercocebus_atys
ENSMAMG00000003357	safb	60	41.129	ENSCSAG00000009949	SAFB	95	41.087	Chlorocebus_sabaeus
ENSMAMG00000003357	safb	82	47.267	ENSCPBG00000010936	-	97	47.673	Chrysemys_picta_bellii
ENSMAMG00000003357	safb	82	44.222	ENSCPBG00000010928	-	97	44.641	Chrysemys_picta_bellii
ENSMAMG00000003357	safb	89	41.243	ENSCANG00000019754	-	92	40.406	Colobus_angolensis_palliatus
ENSMAMG00000003357	safb	74	45.930	ENSCANG00000004774	-	65	58.904	Colobus_angolensis_palliatus
ENSMAMG00000003357	safb	59	40.385	ENSCGRG00001002254	Safb	95	40.149	Cricetulus_griseus_chok1gshd
ENSMAMG00000003357	safb	90	68.932	ENSCSEG00000019870	safb	99	68.932	Cynoglossus_semilaevis
ENSMAMG00000003357	safb	91	64.558	ENSCVAG00000002226	safb	100	65.155	Cyprinodon_variegatus
ENSMAMG00000003357	safb	89	61.309	ENSDARG00000020467	safb	100	62.205	Danio_rerio
ENSMAMG00000003357	safb	60	42.258	ENSDNOG00000015746	SAFB	95	39.913	Dasypus_novemcinctus
ENSMAMG00000003357	safb	59	41.475	ENSEASG00005023019	SAFB	95	42.304	Equus_asinus_asinus
ENSMAMG00000003357	safb	59	40.230	ENSECAG00000018659	SAFB	85	41.567	Equus_caballus
ENSMAMG00000003357	safb	90	65.092	ENSELUG00000022327	safb	98	65.478	Esox_lucius
ENSMAMG00000003357	safb	61	42.215	ENSFCAG00000011835	SAFB	95	41.278	Felis_catus
ENSMAMG00000003357	safb	52	40.422	ENSFALG00000013881	-	96	44.213	Ficedula_albicollis
ENSMAMG00000003357	safb	60	41.546	ENSFALG00000013882	-	89	44.468	Ficedula_albicollis
ENSMAMG00000003357	safb	91	66.707	ENSFHEG00000004219	safb	100	67.784	Fundulus_heteroclitus
ENSMAMG00000003357	safb	91	68.333	ENSGMOG00000014280	safb	100	68.728	Gadus_morhua
ENSMAMG00000003357	safb	62	42.576	ENSGALG00000001948	-	97	47.550	Gallus_gallus
ENSMAMG00000003357	safb	60	42.338	ENSGALG00000013365	-	98	45.148	Gallus_gallus
ENSMAMG00000003357	safb	91	64.713	ENSGAFG00000016162	safb	100	64.713	Gambusia_affinis
ENSMAMG00000003357	safb	91	75.029	ENSGACG00000011385	safb	100	75.491	Gasterosteus_aculeatus
ENSMAMG00000003357	safb	60	53.146	ENSGAGG00000017702	-	90	54.050	Gopherus_agassizii
ENSMAMG00000003357	safb	88	48.977	ENSGAGG00000008424	-	99	49.356	Gopherus_agassizii
ENSMAMG00000003357	safb	60	41.129	ENSGGOG00000015109	SAFB	95	40.870	Gorilla_gorilla
ENSMAMG00000003357	safb	91	73.357	ENSHBUG00000009218	safb	100	72.879	Haplochromis_burtoni
ENSMAMG00000003357	safb	86	65.152	ENSHCOG00000001705	safb	99	65.783	Hippocampus_comes
ENSMAMG00000003357	safb	91	62.731	ENSIPUG00000024869	safb2	99	63.857	Ictalurus_punctatus
ENSMAMG00000003357	safb	91	77.539	ENSKMAG00000022308	safb	100	77.778	Kryptolebias_marmoratus
ENSMAMG00000003357	safb	91	82.130	ENSLBEG00000006015	safb	100	82.130	Labrus_bergylta
ENSMAMG00000003357	safb	60	44.427	ENSLACG00000018090	SAFB	98	49.193	Latimeria_chalumnae
ENSMAMG00000003357	safb	89	64.147	ENSLOCG00000003613	safb	99	64.896	Lepisosteus_oculatus
ENSMAMG00000003357	safb	87	42.889	ENSLAFG00000003840	SAFB	96	42.457	Loxodonta_africana
ENSMAMG00000003357	safb	60	41.286	ENSMFAG00000003885	SAFB	95	41.196	Macaca_fascicularis
ENSMAMG00000003357	safb	60	41.447	ENSMMUG00000017970	SAFB	95	41.087	Macaca_mulatta
ENSMAMG00000003357	safb	60	38.662	ENSMNEG00000035637	SAFB	95	39.738	Macaca_nemestrina
ENSMAMG00000003357	safb	59	37.232	ENSMLEG00000038637	SAFB	95	39.135	Mandrillus_leucophaeus
ENSMAMG00000003357	safb	91	82.304	ENSMZEG00005009120	safb	100	82.779	Maylandia_zebra
ENSMAMG00000003357	safb	58	39.504	ENSMGAG00000001101	-	98	43.593	Meleagris_gallopavo
ENSMAMG00000003357	safb	58	43.891	ENSMGAG00000001051	-	96	48.210	Meleagris_gallopavo
ENSMAMG00000003357	safb	78	37.628	ENSMICG00000046795	-	95	38.804	Microcebus_murinus
ENSMAMG00000003357	safb	60	40.976	ENSMICG00000008739	-	97	41.676	Microcebus_murinus
ENSMAMG00000003357	safb	87	42.241	ENSMODG00000001236	SAFB	97	40.355	Monodelphis_domestica
ENSMAMG00000003357	safb	91	86.761	ENSMALG00000020330	safb	100	86.761	Monopterus_albus
ENSMAMG00000003357	safb	61	41.158	ENSMPUG00000006123	SAFB	90	40.753	Mustela_putorius_furo
ENSMAMG00000003357	safb	89	43.626	ENSMLUG00000001081	SAFB	95	41.740	Myotis_lucifugus
ENSMAMG00000003357	safb	59	39.365	ENSNGAG00000019882	Safb	96	39.979	Nannospalax_galili
ENSMAMG00000003357	safb	60	40.741	ENSNLEG00000013551	SAFB	97	43.630	Nomascus_leucogenys
ENSMAMG00000003357	safb	54	38.596	ENSOPRG00000011561	-	100	39.265	Ochotona_princeps
ENSMAMG00000003357	safb	91	81.732	ENSONIG00000002318	safb	100	82.325	Oreochromis_niloticus
ENSMAMG00000003357	safb	78	39.877	ENSOCUG00000014628	SAFB	97	38.095	Oryctolagus_cuniculus
ENSMAMG00000003357	safb	90	75.152	ENSORLG00000016989	safb	100	74.881	Oryzias_latipes
ENSMAMG00000003357	safb	90	67.439	ENSORLG00020000404	safb	100	66.746	Oryzias_latipes_hni
ENSMAMG00000003357	safb	90	75.152	ENSORLG00015010733	safb	100	75.060	Oryzias_latipes_hsok
ENSMAMG00000003357	safb	91	75.239	ENSOMEG00000009066	safb	100	75.478	Oryzias_melastigma
ENSMAMG00000003357	safb	59	41.914	ENSOGAG00000027769	SAFB	99	41.058	Otolemur_garnettii
ENSMAMG00000003357	safb	74	39.252	ENSOARG00000007856	-	100	38.451	Ovis_aries
ENSMAMG00000003357	safb	89	40.456	ENSOARG00000007662	-	97	39.935	Ovis_aries
ENSMAMG00000003357	safb	60	41.224	ENSPPAG00000035129	SAFB	95	40.870	Pan_paniscus
ENSMAMG00000003357	safb	61	42.122	ENSPPRG00000017197	SAFB	95	41.278	Panthera_pardus
ENSMAMG00000003357	safb	60	41.224	ENSPTRG00000010335	SAFB	95	40.870	Pan_troglodytes
ENSMAMG00000003357	safb	60	40.484	ENSPANG00000007770	SAFB	95	41.461	Papio_anubis
ENSMAMG00000003357	safb	91	62.909	ENSPKIG00000009902	safb	99	63.616	Paramormyrops_kingsleyae
ENSMAMG00000003357	safb	91	45.741	ENSPSIG00000009367	-	97	45.838	Pelodiscus_sinensis
ENSMAMG00000003357	safb	91	47.071	ENSPSIG00000011679	-	98	48.896	Pelodiscus_sinensis
ENSMAMG00000003357	safb	53	49.081	ENSPCIG00000009504	-	98	49.505	Phascolarctos_cinereus
ENSMAMG00000003357	safb	91	65.914	ENSPFOG00000007745	safb	100	67.102	Poecilia_formosa
ENSMAMG00000003357	safb	91	62.828	ENSPLAG00000001614	safb	100	64.351	Poecilia_latipinna
ENSMAMG00000003357	safb	91	65.796	ENSPMEG00000021023	safb	100	66.983	Poecilia_mexicana
ENSMAMG00000003357	safb	91	64.561	ENSPREG00000012496	safb	100	65.771	Poecilia_reticulata
ENSMAMG00000003357	safb	60	40.968	ENSPPYG00000009428	SAFB	95	40.850	Pongo_abelii
ENSMAMG00000003357	safb	59	38.188	ENSPCAG00000006475	SAFB	95	39.700	Procavia_capensis
ENSMAMG00000003357	safb	87	41.040	ENSPCOG00000014090	SAFB	97	39.623	Propithecus_coquereli
ENSMAMG00000003357	safb	64	52.727	ENSPVAG00000004913	SAFB	69	52.727	Pteropus_vampyrus
ENSMAMG00000003357	safb	92	63.345	ENSPNAG00000021838	safb	99	64.376	Pygocentrus_nattereri
ENSMAMG00000003357	safb	60	41.186	ENSRBIG00000042509	SAFB	95	40.940	Rhinopithecus_bieti
ENSMAMG00000003357	safb	60	41.117	ENSRROG00000029278	SAFB	95	41.011	Rhinopithecus_roxellana
ENSMAMG00000003357	safb	60	42.673	ENSSBOG00000026291	SAFB	95	41.658	Saimiri_boliviensis_boliviensis
ENSMAMG00000003357	safb	91	63.307	ENSSFOG00015008156	safb	99	63.348	Scleropages_formosus
ENSMAMG00000003357	safb	91	83.751	ENSSMAG00000009316	safb	100	85.305	Scophthalmus_maximus
ENSMAMG00000003357	safb	91	81.699	ENSSDUG00000009652	safb	100	82.297	Seriola_dumerili
ENSMAMG00000003357	safb	91	86.962	ENSSLDG00000001670	safb	100	88.517	Seriola_lalandi_dorsalis
ENSMAMG00000003357	safb	55	41.166	ENSSARG00000010475	SAFB	98	39.249	Sorex_araneus
ENSMAMG00000003357	safb	51	41.682	ENSSPUG00000009747	-	99	42.681	Sphenodon_punctatus
ENSMAMG00000003357	safb	91	75.685	ENSSPAG00000015682	safb	99	75.805	Stegastes_partitus
ENSMAMG00000003357	safb	59	42.339	ENSSSCG00000013522	SAFB	96	42.586	Sus_scrofa
ENSMAMG00000003357	safb	60	42.212	ENSTGUG00000000489	-	99	46.711	Taeniopygia_guttata
ENSMAMG00000003357	safb	59	41.408	ENSTGUG00000000502	-	97	45.222	Taeniopygia_guttata
ENSMAMG00000003357	safb	91	77.392	ENSTRUG00000003567	safb	100	77.392	Takifugu_rubripes
ENSMAMG00000003357	safb	62	72.078	ENSTNIG00000015470	safb	100	64.259	Tetraodon_nigroviridis
ENSMAMG00000003357	safb	58	72.222	ENSTTRG00000013588	SAFB	63	72.222	Tursiops_truncatus
ENSMAMG00000003357	safb	67	42.689	ENSUMAG00000009734	SAFB	87	41.789	Ursus_maritimus
ENSMAMG00000003357	safb	51	49.394	ENSVPAG00000012043	SAFB	63	48.851	Vicugna_pacos
ENSMAMG00000003357	safb	61	42.283	ENSVVUG00000013720	SAFB	83	41.640	Vulpes_vulpes
ENSMAMG00000003357	safb	91	66.033	ENSXMAG00000003458	safb	100	67.221	Xiphophorus_maculatus