EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003394 (Gene tree)
Gene ID: 113128697
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4135 bases
Position: chrOOHQ01000044.1:1447946-1452080
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005079	RRM_1	PF00076.22	7.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005209	-	1065	-	ENSMAMP00000005079	354 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003394	-	82	96.333	ENSMAMG00000002460	-	76	96.333
ENSMAMG00000003394	-	82	96.667	ENSMAMG00000002377	-	72	96.667
ENSMAMG00000003394	-	100	97.175	ENSMAMG00000003439	-	100	97.175
ENSMAMG00000003394	-	81	61.074	ENSMAMG00000001145	zgc:123010	73	61.074

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003394	-	99	55.080	ENSAPOG00000019633	zgc:123010	64	58.112	Acanthochromis_polyacanthus
ENSMAMG00000003394	-	86	61.143	ENSAPOG00000001034	-	81	61.652	Acanthochromis_polyacanthus
ENSMAMG00000003394	-	91	60.802	ENSACIG00000021684	zgc:123010	82	60.802	Amphilophus_citrinellus
ENSMAMG00000003394	-	91	58.407	ENSAOCG00000005910	zgc:123010	64	58.407	Amphiprion_ocellaris
ENSMAMG00000003394	-	91	58.112	ENSAPEG00000014305	zgc:123010	67	58.112	Amphiprion_percula
ENSMAMG00000003394	-	80	63.000	ENSATEG00000001220	zgc:123010	58	63.000	Anabas_testudineus
ENSMAMG00000003394	-	97	61.809	ENSATEG00000022160	-	78	62.051	Anabas_testudineus
ENSMAMG00000003394	-	56	45.098	ENSAPLG00000013566	-	98	45.098	Anas_platyrhynchos
ENSMAMG00000003394	-	91	57.143	ENSACLG00000010188	zgc:123010	65	57.143	Astatotilapia_calliptera
ENSMAMG00000003394	-	98	59.214	ENSACLG00000012346	-	78	59.398	Astatotilapia_calliptera
ENSMAMG00000003394	-	97	56.983	ENSAMXG00000041967	zgc:123010	63	58.997	Astyanax_mexicanus
ENSMAMG00000003394	-	90	32.964	ENSAMXG00000010871	si:dkey-33c12.4	57	32.964	Astyanax_mexicanus
ENSMAMG00000003394	-	91	56.932	ENSCVAG00000013288	zgc:123010	64	56.932	Cyprinodon_variegatus
ENSMAMG00000003394	-	91	58.841	ENSDARG00000039082	zgc:123010	68	58.841	Danio_rerio
ENSMAMG00000003394	-	86	33.520	ENSDARG00000057890	si:dkey-33c12.4	55	33.520	Danio_rerio
ENSMAMG00000003394	-	94	55.587	ENSELUG00000022008	zgc:123010	81	55.457	Esox_lucius
ENSMAMG00000003394	-	78	32.733	ENSELUG00000002009	si:dkey-33c12.4	87	34.539	Esox_lucius
ENSMAMG00000003394	-	97	54.098	ENSELUG00000021447	-	68	55.908	Esox_lucius
ENSMAMG00000003394	-	59	34.959	ENSFALG00000008867	-	94	34.959	Ficedula_albicollis
ENSMAMG00000003394	-	91	56.083	ENSFHEG00000002306	zgc:123010	64	56.083	Fundulus_heteroclitus
ENSMAMG00000003394	-	70	31.600	ENSGMOG00000001292	-	99	31.600	Gadus_morhua
ENSMAMG00000003394	-	93	54.070	ENSGMOG00000018473	zgc:123010	90	53.913	Gadus_morhua
ENSMAMG00000003394	-	91	54.706	ENSGAFG00000009373	zgc:123010	64	54.706	Gambusia_affinis
ENSMAMG00000003394	-	91	55.457	ENSGACG00000007620	zgc:123010	88	55.457	Gasterosteus_aculeatus
ENSMAMG00000003394	-	76	39.209	ENSGACG00000004936	-	85	39.209	Gasterosteus_aculeatus
ENSMAMG00000003394	-	98	59.459	ENSHBUG00000016720	-	78	59.649	Haplochromis_burtoni
ENSMAMG00000003394	-	79	32.812	ENSIPUG00000005998	si:dkey-33c12.4	54	31.686	Ictalurus_punctatus
ENSMAMG00000003394	-	80	40.373	ENSKMAG00000016610	si:dkey-33c12.4	51	34.951	Kryptolebias_marmoratus
ENSMAMG00000003394	-	91	58.407	ENSKMAG00000021350	zgc:123010	64	58.407	Kryptolebias_marmoratus
ENSMAMG00000003394	-	91	58.580	ENSLBEG00000023984	zgc:123010	64	58.580	Labrus_bergylta
ENSMAMG00000003394	-	96	61.480	ENSLBEG00000013518	-	78	61.323	Labrus_bergylta
ENSMAMG00000003394	-	79	38.253	ENSLACG00000004602	-	61	38.235	Latimeria_chalumnae
ENSMAMG00000003394	-	94	52.226	ENSLACG00000009001	zgc:123010	75	52.226	Latimeria_chalumnae
ENSMAMG00000003394	-	97	51.892	ENSLOCG00000008967	zgc:123010	67	53.429	Lepisosteus_oculatus
ENSMAMG00000003394	-	97	59.406	ENSMZEG00005014740	-	99	59.398	Maylandia_zebra
ENSMAMG00000003394	-	91	57.143	ENSMZEG00005027733	zgc:123010	65	57.143	Maylandia_zebra
ENSMAMG00000003394	-	75	66.782	ENSMMOG00000017955	-	78	60.472	Mola_mola
ENSMAMG00000003394	-	80	63.793	ENSMMOG00000010544	zgc:123010	65	63.793	Mola_mola
ENSMAMG00000003394	-	79	41.304	ENSMALG00000002265	si:dkey-33c12.4	54	41.304	Monopterus_albus
ENSMAMG00000003394	-	99	54.155	ENSMALG00000017698	zgc:123010	64	57.522	Monopterus_albus
ENSMAMG00000003394	-	93	58.160	ENSNBRG00000021157	zgc:123010	75	58.160	Neolamprologus_brichardi
ENSMAMG00000003394	-	79	69.900	ENSONIG00000000297	-	100	69.900	Oreochromis_niloticus
ENSMAMG00000003394	-	62	39.738	ENSONIG00000007538	-	85	40.455	Oreochromis_niloticus
ENSMAMG00000003394	-	99	50.785	ENSONIG00000018353	zgc:123010	68	53.936	Oreochromis_niloticus
ENSMAMG00000003394	-	80	36.897	ENSONIG00000012263	-	91	36.897	Oreochromis_niloticus
ENSMAMG00000003394	-	80	30.321	ENSORLG00000029651	si:dkey-33c12.4	54	30.321	Oryzias_latipes
ENSMAMG00000003394	-	82	55.375	ENSORLG00000007675	zgc:123010	58	57.746	Oryzias_latipes
ENSMAMG00000003394	-	82	55.375	ENSORLG00020003457	zgc:123010	58	57.746	Oryzias_latipes_hni
ENSMAMG00000003394	-	80	30.321	ENSORLG00020008750	si:dkey-33c12.4	51	30.233	Oryzias_latipes_hni
ENSMAMG00000003394	-	97	55.707	ENSORLG00015008373	zgc:123010	65	57.681	Oryzias_latipes_hsok
ENSMAMG00000003394	-	97	55.285	ENSOMEG00000003408	zgc:123010	65	57.391	Oryzias_melastigma
ENSMAMG00000003394	-	80	59.933	ENSPKIG00000015521	zgc:123010	72	54.925	Paramormyrops_kingsleyae
ENSMAMG00000003394	-	80	57.447	ENSPMGG00000020251	zgc:123010	65	57.447	Periophthalmus_magnuspinnatus
ENSMAMG00000003394	-	77	43.525	ENSPMAG00000004544	zgc:123010	99	43.525	Petromyzon_marinus
ENSMAMG00000003394	-	62	42.035	ENSPMAG00000009352	-	77	42.035	Petromyzon_marinus
ENSMAMG00000003394	-	66	39.189	ENSPFOG00000017092	-	50	39.189	Poecilia_formosa
ENSMAMG00000003394	-	91	55.588	ENSPFOG00000001073	zgc:123010	64	55.588	Poecilia_formosa
ENSMAMG00000003394	-	91	55.588	ENSPLAG00000007711	zgc:123010	64	55.588	Poecilia_latipinna
ENSMAMG00000003394	-	91	55.588	ENSPMEG00000005092	zgc:123010	64	55.588	Poecilia_mexicana
ENSMAMG00000003394	-	82	58.362	ENSPREG00000019587	zgc:123010	69	58.362	Poecilia_reticulata
ENSMAMG00000003394	-	89	59.770	ENSPNYG00000023304	-	83	59.770	Pundamilia_nyererei
ENSMAMG00000003394	-	91	57.018	ENSPNYG00000007893	zgc:123010	65	57.018	Pundamilia_nyererei
ENSMAMG00000003394	-	89	32.320	ENSPNAG00000018386	si:dkey-33c12.4	56	31.768	Pygocentrus_nattereri
ENSMAMG00000003394	-	97	58.659	ENSPNAG00000007579	zgc:123010	66	60.767	Pygocentrus_nattereri
ENSMAMG00000003394	-	80	60.596	ENSSFOG00015021394	zgc:123010	63	60.596	Scleropages_formosus
ENSMAMG00000003394	-	76	33.956	ENSSFOG00015009199	-	52	33.956	Scleropages_formosus
ENSMAMG00000003394	-	84	34.731	ENSSFOG00015005186	-	55	34.731	Scleropages_formosus
ENSMAMG00000003394	-	97	59.003	ENSSMAG00000021096	-	68	60.641	Scophthalmus_maximus
ENSMAMG00000003394	-	91	57.522	ENSSMAG00000002904	zgc:123010	67	58.896	Scophthalmus_maximus
ENSMAMG00000003394	-	98	63.391	ENSSDUG00000014026	-	78	63.659	Seriola_dumerili
ENSMAMG00000003394	-	91	58.407	ENSSDUG00000008651	zgc:123010	64	58.407	Seriola_dumerili
ENSMAMG00000003394	-	91	58.407	ENSSLDG00000019386	zgc:123010	66	58.407	Seriola_lalandi_dorsalis
ENSMAMG00000003394	-	91	58.112	ENSSPAG00000013621	zgc:123010	64	58.112	Stegastes_partitus
ENSMAMG00000003394	-	80	59.333	ENSTRUG00000024824	zgc:123010	59	59.333	Takifugu_rubripes
ENSMAMG00000003394	-	60	37.156	ENSTNIG00000001154	-	91	37.156	Tetraodon_nigroviridis
ENSMAMG00000003394	-	78	36.268	ENSTNIG00000010542	-	88	36.268	Tetraodon_nigroviridis
ENSMAMG00000003394	-	90	54.030	ENSTNIG00000001303	zgc:123010	99	54.030	Tetraodon_nigroviridis
ENSMAMG00000003394	-	78	52.297	ENSXETG00000033896	-	99	52.297	Xenopus_tropicalis
ENSMAMG00000003394	-	80	58.199	ENSXCOG00000012281	zgc:123010	72	58.199	Xiphophorus_couchianus
ENSMAMG00000003394	-	91	56.176	ENSXMAG00000002598	zgc:123010	64	56.176	Xiphophorus_maculatus