EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003405 (Gene tree)
Gene ID: 113135204
Gene Symbol: xrcc6 (1 of many)
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3398 bases
Position: chrOOHQ01000019.1:7422344-7425741
Accession: ZDB-GENE-030131-6420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005063	SAP	PF02037.27	9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005192	-	1818	-	ENSMAMP00000005063	605 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003405	xrcc6	97	98.294	ENSMAMG00000003368	xrcc6	96	98.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003405	xrcc6	96	55.403	ENSG00000196419	XRCC6	96	55.331	Homo_sapiens
ENSMAMG00000003405	xrcc6	97	83.959	ENSAPOG00000012704	xrcc6	96	83.959	Acanthochromis_polyacanthus
ENSMAMG00000003405	xrcc6	97	83.106	ENSACIG00000021277	xrcc6	96	83.135	Amphilophus_citrinellus
ENSMAMG00000003405	xrcc6	97	85.128	ENSAOCG00000021344	xrcc6	96	85.128	Amphiprion_ocellaris
ENSMAMG00000003405	xrcc6	97	85.128	ENSAPEG00000020712	xrcc6	96	85.128	Amphiprion_percula
ENSMAMG00000003405	xrcc6	97	87.521	ENSATEG00000007119	xrcc6	96	87.394	Anabas_testudineus
ENSMAMG00000003405	xrcc6	90	57.847	ENSAPLG00000004469	XRCC6	98	57.847	Anas_platyrhynchos
ENSMAMG00000003405	xrcc6	96	46.453	ENSANAG00000023445	-	96	46.029	Aotus_nancymaae
ENSMAMG00000003405	xrcc6	96	48.885	ENSANAG00000035230	-	96	48.901	Aotus_nancymaae
ENSMAMG00000003405	xrcc6	96	48.714	ENSANAG00000020017	-	89	55.721	Aotus_nancymaae
ENSMAMG00000003405	xrcc6	96	55.575	ENSANAG00000018684	XRCC6	97	55.699	Aotus_nancymaae
ENSMAMG00000003405	xrcc6	97	84.130	ENSACLG00000018608	xrcc6	96	84.157	Astatotilapia_calliptera
ENSMAMG00000003405	xrcc6	97	75.427	ENSAMXG00000007545	xrcc6	96	75.427	Astyanax_mexicanus
ENSMAMG00000003405	xrcc6	96	55.575	ENSCJAG00000045512	XRCC6	96	55.699	Callithrix_jacchus
ENSMAMG00000003405	xrcc6	96	54.202	ENSTSYG00000011348	XRCC6	97	54.380	Carlito_syrichta
ENSMAMG00000003405	xrcc6	96	52.316	ENSCCAG00000030041	-	90	52.316	Cebus_capucinus
ENSMAMG00000003405	xrcc6	96	45.955	ENSCCAG00000035711	-	97	44.991	Cebus_capucinus
ENSMAMG00000003405	xrcc6	96	53.559	ENSCCAG00000030468	-	96	53.516	Cebus_capucinus
ENSMAMG00000003405	xrcc6	96	46.312	ENSCCAG00000037663	-	94	46.312	Cebus_capucinus
ENSMAMG00000003405	xrcc6	97	55.290	ENSCATG00000042366	XRCC6	98	55.290	Cercocebus_atys
ENSMAMG00000003405	xrcc6	96	54.717	ENSCLAG00000016669	XRCC6	95	54.717	Chinchilla_lanigera
ENSMAMG00000003405	xrcc6	96	55.403	ENSCSAG00000005784	XRCC6	95	55.403	Chlorocebus_sabaeus
ENSMAMG00000003405	xrcc6	97	56.899	ENSCPBG00000020535	XRCC6	95	56.899	Chrysemys_picta_bellii
ENSMAMG00000003405	xrcc6	95	34.251	ENSCING00000000633	-	95	34.251	Ciona_intestinalis
ENSMAMG00000003405	xrcc6	96	55.403	ENSCANG00000031032	XRCC6	97	55.331	Colobus_angolensis_palliatus
ENSMAMG00000003405	xrcc6	96	51.115	ENSCGRG00001019029	Xrcc6	95	51.115	Cricetulus_griseus_chok1gshd
ENSMAMG00000003405	xrcc6	96	55.575	ENSCGRG00000001528	Xrcc6	95	55.575	Cricetulus_griseus_crigri
ENSMAMG00000003405	xrcc6	97	79.216	ENSCSEG00000020434	xrcc6	96	79.216	Cynoglossus_semilaevis
ENSMAMG00000003405	xrcc6	97	81.261	ENSCVAG00000002189	xrcc6	96	81.261	Cyprinodon_variegatus
ENSMAMG00000003405	xrcc6	97	73.720	ENSDARG00000071551	xrcc6	96	73.720	Danio_rerio
ENSMAMG00000003405	xrcc6	68	51.214	ENSETEG00000015333	-	67	51.214	Echinops_telfairi
ENSMAMG00000003405	xrcc6	96	54.045	ENSEASG00005001514	XRCC6	95	54.031	Equus_asinus_asinus
ENSMAMG00000003405	xrcc6	96	54.217	ENSECAG00000017563	XRCC6	99	53.641	Equus_caballus
ENSMAMG00000003405	xrcc6	97	72.867	ENSELUG00000020301	xrcc6	96	72.867	Esox_lucius
ENSMAMG00000003405	xrcc6	96	57.436	ENSFALG00000011908	XRCC6	92	57.436	Ficedula_albicollis
ENSMAMG00000003405	xrcc6	97	83.816	ENSFHEG00000016833	xrcc6	96	83.816	Fundulus_heteroclitus
ENSMAMG00000003405	xrcc6	97	65.306	ENSGMOG00000013524	xrcc6	96	65.306	Gadus_morhua
ENSMAMG00000003405	xrcc6	97	57.653	ENSGALG00000011932	XRCC6	95	57.653	Gallus_gallus
ENSMAMG00000003405	xrcc6	97	80.645	ENSGAFG00000008130	xrcc6	96	80.645	Gambusia_affinis
ENSMAMG00000003405	xrcc6	97	82.852	ENSGACG00000004868	xrcc6	95	82.852	Gasterosteus_aculeatus
ENSMAMG00000003405	xrcc6	97	56.048	ENSGAGG00000017518	XRCC6	95	56.048	Gopherus_agassizii
ENSMAMG00000003405	xrcc6	98	55.051	ENSGGOG00000015885	XRCC6	98	55.051	Gorilla_gorilla
ENSMAMG00000003405	xrcc6	94	84.127	ENSHBUG00000023281	xrcc6	100	84.127	Haplochromis_burtoni
ENSMAMG00000003405	xrcc6	96	53.173	ENSHGLG00000018078	XRCC6	95	53.173	Heterocephalus_glaber_female
ENSMAMG00000003405	xrcc6	96	53.173	ENSHGLG00100011264	XRCC6	95	53.173	Heterocephalus_glaber_male
ENSMAMG00000003405	xrcc6	97	77.986	ENSHCOG00000009821	xrcc6	96	78.024	Hippocampus_comes
ENSMAMG00000003405	xrcc6	97	73.720	ENSIPUG00000000767	xrcc6	96	73.720	Ictalurus_punctatus
ENSMAMG00000003405	xrcc6	97	54.437	ENSSTOG00000009490	XRCC6	95	54.437	Ictidomys_tridecemlineatus
ENSMAMG00000003405	xrcc6	96	50.429	ENSJJAG00000017136	Xrcc6	94	50.943	Jaculus_jaculus
ENSMAMG00000003405	xrcc6	97	83.618	ENSKMAG00000002141	xrcc6	96	83.618	Kryptolebias_marmoratus
ENSMAMG00000003405	xrcc6	97	84.300	ENSLBEG00000002691	xrcc6	95	84.300	Labrus_bergylta
ENSMAMG00000003405	xrcc6	80	67.327	ENSLOCG00000011533	xrcc6	93	67.327	Lepisosteus_oculatus
ENSMAMG00000003405	xrcc6	97	55.008	ENSMFAG00000003352	XRCC6	97	55.331	Macaca_fascicularis
ENSMAMG00000003405	xrcc6	96	55.403	ENSMMUG00000001856	XRCC6	96	55.331	Macaca_mulatta
ENSMAMG00000003405	xrcc6	96	55.403	ENSMNEG00000035076	XRCC6	98	55.210	Macaca_nemestrina
ENSMAMG00000003405	xrcc6	96	55.403	ENSMLEG00000019869	XRCC6	96	55.331	Mandrillus_leucophaeus
ENSMAMG00000003405	xrcc6	97	83.959	ENSMZEG00005028080	xrcc6	96	83.986	Maylandia_zebra
ENSMAMG00000003405	xrcc6	97	57.313	ENSMGAG00000012146	XRCC6	94	57.313	Meleagris_gallopavo
ENSMAMG00000003405	xrcc6	96	55.232	ENSMAUG00000017340	Xrcc6	95	55.232	Mesocricetus_auratus
ENSMAMG00000003405	xrcc6	96	54.374	ENSMOCG00000015717	Xrcc6	95	54.374	Microtus_ochrogaster
ENSMAMG00000003405	xrcc6	97	83.503	ENSMMOG00000003536	xrcc6	96	83.503	Mola_mola
ENSMAMG00000003405	xrcc6	97	85.666	ENSMALG00000013912	xrcc6	92	85.690	Monopterus_albus
ENSMAMG00000003405	xrcc6	97	51.536	MGP_CAROLIEiJ_G0020067	Xrcc6	95	51.536	Mus_caroli
ENSMAMG00000003405	xrcc6	97	55.461	ENSMUSG00000022471	Xrcc6	99	57.576	Mus_musculus
ENSMAMG00000003405	xrcc6	97	55.290	MGP_PahariEiJ_G0020069	Xrcc6	95	55.290	Mus_pahari
ENSMAMG00000003405	xrcc6	97	55.556	MGP_SPRETEiJ_G0020967	Xrcc6	99	55.556	Mus_spretus
ENSMAMG00000003405	xrcc6	96	54.717	ENSNGAG00000013750	Xrcc6	95	54.717	Nannospalax_galili
ENSMAMG00000003405	xrcc6	97	83.959	ENSNBRG00000004125	xrcc6	96	83.986	Neolamprologus_brichardi
ENSMAMG00000003405	xrcc6	96	54.296	ENSOPRG00000002386	XRCC6	99	54.296	Ochotona_princeps
ENSMAMG00000003405	xrcc6	97	54.608	ENSODEG00000015847	XRCC6	95	54.608	Octodon_degus
ENSMAMG00000003405	xrcc6	97	84.418	ENSONIG00000019715	xrcc6	96	84.300	Oreochromis_niloticus
ENSMAMG00000003405	xrcc6	69	57.074	ENSOANG00000011328	XRCC6	99	57.074	Ornithorhynchus_anatinus
ENSMAMG00000003405	xrcc6	96	55.250	ENSOCUG00000006948	XRCC6	95	55.232	Oryctolagus_cuniculus
ENSMAMG00000003405	xrcc6	97	81.261	ENSORLG00020007820	xrcc6	96	81.261	Oryzias_latipes_hni
ENSMAMG00000003405	xrcc6	97	80.920	ENSORLG00015006406	xrcc6	96	80.920	Oryzias_latipes_hsok
ENSMAMG00000003405	xrcc6	97	82.906	ENSOMEG00000008998	xrcc6	96	82.794	Oryzias_melastigma
ENSMAMG00000003405	xrcc6	96	53.516	ENSOGAG00000008821	XRCC6	96	53.401	Otolemur_garnettii
ENSMAMG00000003405	xrcc6	86	57.429	ENSPPAG00000037167	XRCC6	96	57.429	Pan_paniscus
ENSMAMG00000003405	xrcc6	96	55.403	ENSPTRG00000022548	XRCC6	99	55.308	Pan_troglodytes
ENSMAMG00000003405	xrcc6	96	55.403	ENSPTRG00000045824	XRCC6	99	55.308	Pan_troglodytes
ENSMAMG00000003405	xrcc6	97	55.119	ENSPANG00000001252	XRCC6	97	58.261	Papio_anubis
ENSMAMG00000003405	xrcc6	97	70.598	ENSPKIG00000003974	xrcc6	96	70.598	Paramormyrops_kingsleyae
ENSMAMG00000003405	xrcc6	95	80.589	ENSPMGG00000014220	xrcc6	96	80.623	Periophthalmus_magnuspinnatus
ENSMAMG00000003405	xrcc6	96	54.889	ENSPEMG00000023446	Xrcc6	95	54.889	Peromyscus_maniculatus_bairdii
ENSMAMG00000003405	xrcc6	96	56.873	ENSPCIG00000026409	XRCC6	95	56.873	Phascolarctos_cinereus
ENSMAMG00000003405	xrcc6	97	83.135	ENSPFOG00000017173	xrcc6	96	83.135	Poecilia_formosa
ENSMAMG00000003405	xrcc6	97	82.624	ENSPLAG00000000562	xrcc6	96	82.624	Poecilia_latipinna
ENSMAMG00000003405	xrcc6	97	82.964	ENSPMEG00000018478	xrcc6	96	82.964	Poecilia_mexicana
ENSMAMG00000003405	xrcc6	97	82.993	ENSPREG00000020957	xrcc6	90	82.993	Poecilia_reticulata
ENSMAMG00000003405	xrcc6	96	46.575	ENSPPYG00000011876	XRCC6	94	46.575	Pongo_abelii
ENSMAMG00000003405	xrcc6	97	53.231	ENSPVAG00000001168	XRCC6	96	53.231	Pteropus_vampyrus
ENSMAMG00000003405	xrcc6	97	83.788	ENSPNYG00000003815	xrcc6	96	79.612	Pundamilia_nyererei
ENSMAMG00000003405	xrcc6	97	54.437	ENSRNOG00000006392	Xrcc6	95	54.437	Rattus_norvegicus
ENSMAMG00000003405	xrcc6	96	51.291	ENSRBIG00000039794	XRCC6	98	51.291	Rhinopithecus_bieti
ENSMAMG00000003405	xrcc6	96	55.403	ENSRROG00000030297	XRCC6	96	55.535	Rhinopithecus_roxellana
ENSMAMG00000003405	xrcc6	67	50.369	ENSSBOG00000024724	-	99	50.369	Saimiri_boliviensis_boliviensis
ENSMAMG00000003405	xrcc6	96	55.308	ENSSHAG00000010790	XRCC6	95	55.308	Sarcophilus_harrisii
ENSMAMG00000003405	xrcc6	97	71.453	ENSSFOG00015014409	xrcc6	96	71.502	Scleropages_formosus
ENSMAMG00000003405	xrcc6	97	85.836	ENSSMAG00000006496	xrcc6	96	85.860	Scophthalmus_maximus
ENSMAMG00000003405	xrcc6	97	85.836	ENSSDUG00000007542	xrcc6	96	85.860	Seriola_dumerili
ENSMAMG00000003405	xrcc6	97	84.983	ENSSLDG00000009974	xrcc6	96	85.009	Seriola_lalandi_dorsalis
ENSMAMG00000003405	xrcc6	97	57.338	ENSSPUG00000012086	XRCC6	95	57.338	Sphenodon_punctatus
ENSMAMG00000003405	xrcc6	97	85.836	ENSSPAG00000015199	xrcc6	96	85.860	Stegastes_partitus
ENSMAMG00000003405	xrcc6	96	56.581	ENSTGUG00000009852	-	95	56.581	Taeniopygia_guttata
ENSMAMG00000003405	xrcc6	97	79.387	ENSTRUG00000017070	xrcc6	96	79.387	Takifugu_rubripes
ENSMAMG00000003405	xrcc6	97	78.041	ENSTNIG00000012947	xrcc6	99	78.041	Tetraodon_nigroviridis
ENSMAMG00000003405	xrcc6	96	50.687	ENSTBEG00000011736	XRCC6	99	50.687	Tupaia_belangeri
ENSMAMG00000003405	xrcc6	87	51.195	ENSTTRG00000006749	XRCC6	86	51.525	Tursiops_truncatus
ENSMAMG00000003405	xrcc6	97	82.964	ENSXMAG00000009691	xrcc6	96	82.964	Xiphophorus_maculatus