EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003439 (Gene tree)
Gene ID: 113128696
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4135 bases
Position: chrOOHQ01000044.1:1484901-1489035
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005121	RRM_1	PF00076.22	6.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005255	-	1044	-	ENSMAMP00000005121	347 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003439	-	90	89.408	ENSMAMG00000002460	-	78	89.408
ENSMAMG00000003439	-	100	97.175	ENSMAMG00000003394	-	100	97.175
ENSMAMG00000003439	-	90	89.720	ENSMAMG00000002377	-	75	89.720
ENSMAMG00000003439	-	81	61.565	ENSMAMG00000001145	zgc:123010	72	61.565

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003439	-	99	56.403	ENSAPOG00000019633	zgc:123010	64	59.281	Acanthochromis_polyacanthus
ENSMAMG00000003439	-	86	60.571	ENSAPOG00000001034	-	81	61.062	Acanthochromis_polyacanthus
ENSMAMG00000003439	-	90	62.069	ENSACIG00000021684	zgc:123010	82	62.069	Amphilophus_citrinellus
ENSMAMG00000003439	-	97	57.182	ENSAOCG00000005910	zgc:123010	64	59.581	Amphiprion_ocellaris
ENSMAMG00000003439	-	97	56.906	ENSAPEG00000014305	zgc:123010	67	59.281	Amphiprion_percula
ENSMAMG00000003439	-	97	61.307	ENSATEG00000022160	-	78	61.538	Anabas_testudineus
ENSMAMG00000003439	-	97	56.906	ENSATEG00000001220	zgc:123010	64	59.281	Anabas_testudineus
ENSMAMG00000003439	-	57	45.098	ENSAPLG00000013566	-	98	45.098	Anas_platyrhynchos
ENSMAMG00000003439	-	97	56.011	ENSACLG00000010188	zgc:123010	65	58.284	Astatotilapia_calliptera
ENSMAMG00000003439	-	98	58.968	ENSACLG00000012346	-	78	59.148	Astatotilapia_calliptera
ENSMAMG00000003439	-	90	33.148	ENSAMXG00000010871	si:dkey-33c12.4	57	33.148	Astyanax_mexicanus
ENSMAMG00000003439	-	97	58.357	ENSAMXG00000041967	zgc:123010	62	60.790	Astyanax_mexicanus
ENSMAMG00000003439	-	97	55.525	ENSCVAG00000013288	zgc:123010	64	58.084	Cyprinodon_variegatus
ENSMAMG00000003439	-	86	33.239	ENSDARG00000057890	si:dkey-33c12.4	54	33.239	Danio_rerio
ENSMAMG00000003439	-	91	59.752	ENSDARG00000039082	zgc:123010	68	59.752	Danio_rerio
ENSMAMG00000003439	-	80	32.440	ENSELUG00000002009	si:dkey-33c12.4	87	33.882	Esox_lucius
ENSMAMG00000003439	-	97	56.389	ENSELUG00000021447	-	66	58.967	Esox_lucius
ENSMAMG00000003439	-	90	57.958	ENSELUG00000022008	zgc:123010	80	57.143	Esox_lucius
ENSMAMG00000003439	-	60	34.959	ENSFALG00000008867	-	94	34.959	Ficedula_albicollis
ENSMAMG00000003439	-	97	55.000	ENSFHEG00000002306	zgc:123010	64	57.229	Fundulus_heteroclitus
ENSMAMG00000003439	-	97	53.740	ENSGMOG00000018473	zgc:123010	90	55.132	Gadus_morhua
ENSMAMG00000003439	-	71	31.600	ENSGMOG00000001292	-	99	31.600	Gadus_morhua
ENSMAMG00000003439	-	63	37.838	ENSGALG00000036747	TTC31	50	37.838	Gallus_gallus
ENSMAMG00000003439	-	97	53.740	ENSGAFG00000009373	zgc:123010	64	55.856	Gambusia_affinis
ENSMAMG00000003439	-	97	54.696	ENSGACG00000007620	zgc:123010	88	56.886	Gasterosteus_aculeatus
ENSMAMG00000003439	-	89	36.792	ENSGACG00000004936	-	97	36.792	Gasterosteus_aculeatus
ENSMAMG00000003439	-	98	59.214	ENSHBUG00000016720	-	78	59.398	Haplochromis_burtoni
ENSMAMG00000003439	-	80	32.710	ENSIPUG00000005998	si:dkey-33c12.4	51	32.710	Ictalurus_punctatus
ENSMAMG00000003439	-	97	57.459	ENSKMAG00000021350	zgc:123010	64	59.880	Kryptolebias_marmoratus
ENSMAMG00000003439	-	96	60.714	ENSLBEG00000013518	-	78	60.560	Labrus_bergylta
ENSMAMG00000003439	-	97	57.064	ENSLBEG00000023984	zgc:123010	64	59.459	Labrus_bergylta
ENSMAMG00000003439	-	90	53.583	ENSLACG00000009001	zgc:123010	72	53.583	Latimeria_chalumnae
ENSMAMG00000003439	-	80	37.879	ENSLACG00000004602	-	59	37.879	Latimeria_chalumnae
ENSMAMG00000003439	-	97	53.151	ENSLOCG00000008967	zgc:123010	67	54.783	Lepisosteus_oculatus
ENSMAMG00000003439	-	97	59.158	ENSMZEG00005014740	-	99	59.148	Maylandia_zebra
ENSMAMG00000003439	-	97	56.011	ENSMZEG00005027733	zgc:123010	65	58.284	Maylandia_zebra
ENSMAMG00000003439	-	81	64.014	ENSMMOG00000010544	zgc:123010	65	64.014	Mola_mola
ENSMAMG00000003439	-	89	61.446	ENSMMOG00000017955	-	78	61.446	Mola_mola
ENSMAMG00000003439	-	99	55.707	ENSMALG00000017698	zgc:123010	64	58.683	Monopterus_albus
ENSMAMG00000003439	-	80	41.727	ENSMALG00000002265	si:dkey-33c12.4	54	41.727	Monopterus_albus
ENSMAMG00000003439	-	93	59.091	ENSNBRG00000021157	zgc:123010	74	59.752	Neolamprologus_brichardi
ENSMAMG00000003439	-	80	69.900	ENSONIG00000000297	-	100	69.900	Oreochromis_niloticus
ENSMAMG00000003439	-	80	37.324	ENSONIG00000012263	-	89	37.324	Oreochromis_niloticus
ENSMAMG00000003439	-	99	52.255	ENSONIG00000018353	zgc:123010	68	55.030	Oreochromis_niloticus
ENSMAMG00000003439	-	60	43.662	ENSONIG00000007538	-	88	39.565	Oreochromis_niloticus
ENSMAMG00000003439	-	77	59.140	ENSORLG00000007675	zgc:123010	58	59.140	Oryzias_latipes
ENSMAMG00000003439	-	77	59.140	ENSORLG00020003457	zgc:123010	58	59.140	Oryzias_latipes_hni
ENSMAMG00000003439	-	93	58.824	ENSORLG00015008373	zgc:123010	65	58.824	Oryzias_latipes_hsok
ENSMAMG00000003439	-	88	31.522	ENSOMEG00000008913	-	55	31.522	Oryzias_melastigma
ENSMAMG00000003439	-	97	56.077	ENSOMEG00000003408	zgc:123010	65	58.529	Oryzias_melastigma
ENSMAMG00000003439	-	91	32.787	ENSPKIG00000011819	-	57	32.884	Paramormyrops_kingsleyae
ENSMAMG00000003439	-	90	57.143	ENSPKIG00000015521	zgc:123010	72	57.143	Paramormyrops_kingsleyae
ENSMAMG00000003439	-	83	56.357	ENSPMGG00000020251	zgc:123010	67	56.357	Periophthalmus_magnuspinnatus
ENSMAMG00000003439	-	63	41.410	ENSPMAG00000009352	-	77	41.410	Petromyzon_marinus
ENSMAMG00000003439	-	78	43.525	ENSPMAG00000004544	zgc:123010	99	43.525	Petromyzon_marinus
ENSMAMG00000003439	-	66	39.189	ENSPFOG00000017092	-	50	39.189	Poecilia_formosa
ENSMAMG00000003439	-	98	54.121	ENSPFOG00000001073	zgc:123010	64	56.757	Poecilia_formosa
ENSMAMG00000003439	-	98	54.121	ENSPLAG00000007711	zgc:123010	64	56.757	Poecilia_latipinna
ENSMAMG00000003439	-	98	54.121	ENSPMEG00000005092	zgc:123010	64	56.757	Poecilia_mexicana
ENSMAMG00000003439	-	90	55.799	ENSPREG00000019587	zgc:123010	73	55.799	Poecilia_reticulata
ENSMAMG00000003439	-	82	63.323	ENSPNYG00000023304	-	80	61.791	Pundamilia_nyererei
ENSMAMG00000003439	-	97	55.890	ENSPNYG00000007893	zgc:123010	65	58.160	Pundamilia_nyererei
ENSMAMG00000003439	-	97	60.057	ENSPNAG00000007579	zgc:123010	65	62.614	Pygocentrus_nattereri
ENSMAMG00000003439	-	80	33.028	ENSPNAG00000018386	si:dkey-33c12.4	56	32.312	Pygocentrus_nattereri
ENSMAMG00000003439	-	80	36.076	ENSSFOG00015005186	-	60	33.702	Scleropages_formosus
ENSMAMG00000003439	-	78	33.956	ENSSFOG00015009199	-	52	33.956	Scleropages_formosus
ENSMAMG00000003439	-	90	57.186	ENSSFOG00015021394	zgc:123010	69	57.186	Scleropages_formosus
ENSMAMG00000003439	-	97	59.003	ENSSMAG00000021096	-	68	60.641	Scophthalmus_maximus
ENSMAMG00000003439	-	97	57.584	ENSSMAG00000002904	zgc:123010	67	60.125	Scophthalmus_maximus
ENSMAMG00000003439	-	97	57.182	ENSSDUG00000008651	zgc:123010	64	59.581	Seriola_dumerili
ENSMAMG00000003439	-	98	62.899	ENSSDUG00000014026	-	78	63.158	Seriola_dumerili
ENSMAMG00000003439	-	97	57.182	ENSSLDG00000019386	zgc:123010	66	59.581	Seriola_lalandi_dorsalis
ENSMAMG00000003439	-	97	56.906	ENSSPAG00000013621	zgc:123010	64	59.281	Stegastes_partitus
ENSMAMG00000003439	-	90	56.024	ENSTRUG00000024824	zgc:123010	65	56.024	Takifugu_rubripes
ENSMAMG00000003439	-	89	53.529	ENSTNIG00000001303	zgc:123010	99	53.529	Tetraodon_nigroviridis
ENSMAMG00000003439	-	82	35.739	ENSTNIG00000010542	-	90	35.739	Tetraodon_nigroviridis
ENSMAMG00000003439	-	61	37.156	ENSTNIG00000001154	-	91	37.156	Tetraodon_nigroviridis
ENSMAMG00000003439	-	80	52.297	ENSXETG00000033896	-	99	52.297	Xenopus_tropicalis
ENSMAMG00000003439	-	81	58.387	ENSXCOG00000012281	zgc:123010	72	58.387	Xiphophorus_couchianus
ENSMAMG00000003439	-	90	57.357	ENSXMAG00000002598	zgc:123010	64	57.357	Xiphophorus_maculatus