EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003479 (Gene tree)
Gene ID: 113133790
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 8231 bases
Position: chrOOHQ01000035.1:9727217-9735447
Accession: 113133790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005168	RRM_1	PF00076.22	2.1e-40	1	3
ENSMAMP00000005168	RRM_1	PF00076.22	2.1e-40	2	3
ENSMAMP00000005168	RRM_1	PF00076.22	2.1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005303	-	2498	-	ENSMAMP00000005168	550 (aa)	XP_026168472	UPI000E455264

Gene Model

Click here to download ENSMAMG00000003479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003479	-	69	43.603	ENSMAMG00000002086	ncl	53	42.572

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003479	-	69	40.933	ENSAPOG00000023888	ncl	62	40.185	Acanthochromis_polyacanthus
ENSMAMG00000003479	-	89	55.744	ENSAPOG00000014534	-	93	55.009	Acanthochromis_polyacanthus
ENSMAMG00000003479	-	69	40.838	ENSACIG00000013234	ncl	66	41.463	Amphilophus_citrinellus
ENSMAMG00000003479	-	81	62.723	ENSAOCG00000014792	-	71	62.723	Amphiprion_ocellaris
ENSMAMG00000003479	-	69	41.451	ENSAOCG00000003133	ncl	55	41.505	Amphiprion_ocellaris
ENSMAMG00000003479	-	69	41.451	ENSAPEG00000002769	ncl	60	39.821	Amphiprion_percula
ENSMAMG00000003479	-	81	62.723	ENSAPEG00000013612	-	71	62.723	Amphiprion_percula
ENSMAMG00000003479	-	69	41.818	ENSATEG00000013343	ncl	61	40.406	Anabas_testudineus
ENSMAMG00000003479	-	94	62.500	ENSATEG00000019862	-	88	69.412	Anabas_testudineus
ENSMAMG00000003479	-	65	38.919	ENSAPLG00000012897	-	65	38.257	Anas_platyrhynchos
ENSMAMG00000003479	-	69	38.182	ENSACAG00000001006	-	54	38.443	Anolis_carolinensis
ENSMAMG00000003479	-	58	41.693	ENSACLG00000026031	ncl	91	41.595	Astatotilapia_calliptera
ENSMAMG00000003479	-	69	39.691	ENSAMXG00000001647	ncl	91	40.171	Astyanax_mexicanus
ENSMAMG00000003479	-	65	30.278	ENSCHIG00000012665	-	54	31.378	Capra_hircus
ENSMAMG00000003479	-	70	38.250	ENSCPBG00000016444	-	63	37.528	Chrysemys_picta_bellii
ENSMAMG00000003479	-	73	39.496	ENSCSEG00000015089	ncl	60	41.422	Cynoglossus_semilaevis
ENSMAMG00000003479	-	69	41.470	ENSCVAG00000012600	ncl	58	42.092	Cyprinodon_variegatus
ENSMAMG00000003479	-	68	40.957	ENSDARG00000002710	ncl	88	41.292	Danio_rerio
ENSMAMG00000003479	-	72	35.500	ENSEBUG00000016173	ncl	63	33.198	Eptatretus_burgeri
ENSMAMG00000003479	-	69	40.000	ENSELUG00000006033	ncl	64	39.381	Esox_lucius
ENSMAMG00000003479	-	77	46.622	ENSELUG00000022826	-	89	47.086	Esox_lucius
ENSMAMG00000003479	-	69	39.594	ENSFALG00000007592	-	69	36.673	Ficedula_albicollis
ENSMAMG00000003479	-	69	40.674	ENSFHEG00000018000	ncl	64	40.979	Fundulus_heteroclitus
ENSMAMG00000003479	-	71	42.000	ENSGMOG00000001341	ncl	65	40.367	Gadus_morhua
ENSMAMG00000003479	-	69	38.131	ENSGALG00000032930	NCL	55	39.547	Gallus_gallus
ENSMAMG00000003479	-	69	40.625	ENSGAFG00000015375	ncl	58	39.597	Gambusia_affinis
ENSMAMG00000003479	-	69	39.267	ENSGACG00000008970	ncl	73	36.117	Gasterosteus_aculeatus
ENSMAMG00000003479	-	65	38.649	ENSGAGG00000013330	-	65	35.931	Gopherus_agassizii
ENSMAMG00000003479	-	69	42.448	ENSHBUG00000006869	ncl	57	42.344	Haplochromis_burtoni
ENSMAMG00000003479	-	69	41.192	ENSHCOG00000010234	ncl	62	39.301	Hippocampus_comes
ENSMAMG00000003479	-	58	40.312	ENSIPUG00000024556	ncl	85	40.805	Ictalurus_punctatus
ENSMAMG00000003479	-	69	41.146	ENSKMAG00000008111	ncl	58	41.148	Kryptolebias_marmoratus
ENSMAMG00000003479	-	88	53.069	ENSLBEG00000007915	-	80	56.875	Labrus_bergylta
ENSMAMG00000003479	-	69	40.885	ENSLBEG00000019073	ncl	59	40.678	Labrus_bergylta
ENSMAMG00000003479	-	69	64.062	ENSLBEG00000014278	-	87	63.333	Labrus_bergylta
ENSMAMG00000003479	-	68	41.053	ENSLACG00000009328	ncl	80	38.926	Latimeria_chalumnae
ENSMAMG00000003479	-	71	36.802	ENSLACG00000022167	-	84	37.073	Latimeria_chalumnae
ENSMAMG00000003479	-	67	38.830	ENSLOCG00000004828	ncl	53	39.756	Lepisosteus_oculatus
ENSMAMG00000003479	-	69	42.448	ENSMZEG00005017438	ncl	61	41.480	Maylandia_zebra
ENSMAMG00000003479	-	65	38.649	ENSMGAG00000008147	-	92	39.493	Meleagris_gallopavo
ENSMAMG00000003479	-	58	40.498	ENSMMOG00000008553	ncl	89	40.974	Mola_mola
ENSMAMG00000003479	-	69	38.303	ENSMODG00000002470	-	63	36.876	Monodelphis_domestica
ENSMAMG00000003479	-	72	38.243	ENSMALG00000014827	ncl	60	37.116	Monopterus_albus
ENSMAMG00000003479	-	69	37.922	ENSMEUG00000012335	-	71	35.600	Notamacropus_eugenii
ENSMAMG00000003479	-	69	42.147	ENSONIG00000012508	ncl	59	41.324	Oreochromis_niloticus
ENSMAMG00000003479	-	71	51.646	ENSONIG00000010631	-	98	51.646	Oreochromis_niloticus
ENSMAMG00000003479	-	65	38.567	ENSOANG00000008732	-	61	39.241	Ornithorhynchus_anatinus
ENSMAMG00000003479	-	68	40.426	ENSORLG00000007055	ncl	57	39.318	Oryzias_latipes
ENSMAMG00000003479	-	73	52.605	ENSORLG00000004645	-	86	53.102	Oryzias_latipes
ENSMAMG00000003479	-	80	48.989	ENSORLG00020003497	-	86	49.438	Oryzias_latipes_hni
ENSMAMG00000003479	-	69	40.104	ENSORLG00020017943	ncl	57	39.318	Oryzias_latipes_hni
ENSMAMG00000003479	-	73	53.350	ENSORLG00015006613	-	81	53.598	Oryzias_latipes_hsok
ENSMAMG00000003479	-	69	39.426	ENSORLG00015013815	ncl	94	39.266	Oryzias_latipes_hsok
ENSMAMG00000003479	-	69	41.667	ENSOMEG00000020786	ncl	55	40.749	Oryzias_melastigma
ENSMAMG00000003479	-	72	51.256	ENSOMEG00000015864	-	85	51.256	Oryzias_melastigma
ENSMAMG00000003479	-	70	40.206	ENSPKIG00000002604	ncl	56	40.633	Paramormyrops_kingsleyae
ENSMAMG00000003479	-	65	39.011	ENSPSIG00000002361	-	53	39.130	Pelodiscus_sinensis
ENSMAMG00000003479	-	69	37.696	ENSPMGG00000004709	ncl	86	37.931	Periophthalmus_magnuspinnatus
ENSMAMG00000003479	-	69	37.984	ENSPCIG00000003293	-	62	37.310	Phascolarctos_cinereus
ENSMAMG00000003479	-	69	40.625	ENSPFOG00000024205	ncl	56	39.954	Poecilia_formosa
ENSMAMG00000003479	-	69	40.625	ENSPLAG00000024026	ncl	53	41.379	Poecilia_latipinna
ENSMAMG00000003479	-	69	40.625	ENSPMEG00000006000	ncl	52	41.414	Poecilia_mexicana
ENSMAMG00000003479	-	70	42.268	ENSPNYG00000020494	ncl	60	41.458	Pundamilia_nyererei
ENSMAMG00000003479	-	67	40.909	ENSPNAG00000006192	ncl	65	37.223	Pygocentrus_nattereri
ENSMAMG00000003479	-	69	35.156	ENSSHAG00000002702	-	65	34.873	Sarcophilus_harrisii
ENSMAMG00000003479	-	72	32.800	ENSSHAG00000007489	-	55	33.077	Sarcophilus_harrisii
ENSMAMG00000003479	-	70	41.837	ENSSFOG00015008583	ncl	73	38.956	Scleropages_formosus
ENSMAMG00000003479	-	59	34.431	ENSSFOG00015013153	-	80	34.431	Scleropages_formosus
ENSMAMG00000003479	-	69	42.338	ENSSMAG00000021241	ncl	66	39.709	Scophthalmus_maximus
ENSMAMG00000003479	-	87	53.913	ENSSMAG00000007582	-	94	54.017	Scophthalmus_maximus
ENSMAMG00000003479	-	87	63.783	ENSSDUG00000010922	-	93	63.780	Seriola_dumerili
ENSMAMG00000003479	-	69	41.558	ENSSDUG00000006128	ncl	90	41.849	Seriola_dumerili
ENSMAMG00000003479	-	73	72.886	ENSSLDG00000015784	-	94	59.058	Seriola_lalandi_dorsalis
ENSMAMG00000003479	-	69	40.779	ENSSLDG00000002012	ncl	60	40.590	Seriola_lalandi_dorsalis
ENSMAMG00000003479	-	68	35.443	ENSSPUG00000008244	-	64	35.566	Sphenodon_punctatus
ENSMAMG00000003479	-	76	62.381	ENSSPAG00000001859	-	74	58.913	Stegastes_partitus
ENSMAMG00000003479	-	69	43.542	ENSSPAG00000002637	ncl	83	43.092	Stegastes_partitus
ENSMAMG00000003479	-	69	39.589	ENSTGUG00000009782	-	67	39.310	Taeniopygia_guttata
ENSMAMG00000003479	-	68	41.333	ENSTRUG00000008185	ncl	62	40.275	Takifugu_rubripes
ENSMAMG00000003479	-	67	42.204	ENSTNIG00000012186	ncl	64	42.365	Tetraodon_nigroviridis
ENSMAMG00000003479	-	66	42.424	ENSXETG00000009517	ncl	54	42.674	Xenopus_tropicalis
ENSMAMG00000003479	-	72	53.598	ENSXCOG00000007369	-	93	53.598	Xiphophorus_couchianus
ENSMAMG00000003479	-	69	36.719	ENSXCOG00000003524	ncl	92	34.844	Xiphophorus_couchianus
ENSMAMG00000003479	-	69	41.927	ENSXMAG00000005914	ncl	54	42.092	Xiphophorus_maculatus