EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003546 (Gene tree)
Gene ID: 113131192
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 11560 bases
Position: chrOOHQ01000014.1:624541-636100
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005250	MMR_HSR1	PF01926.23	1.6e-06	1	1
ENSMAMP00000005260	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005396	-	1512	-	ENSMAMP00000005260	306 (aa)	-	-
ENSMAMT00000005386	-	1496	-	ENSMAMP00000005250	300 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003546	-	93	34.007	ENSMAMG00000006432	-	63	35.484
ENSMAMG00000003546	-	86	54.231	ENSMAMG00000003570	-	89	54.231
ENSMAMG00000003546	-	89	34.944	ENSMAMG00000006464	-	96	34.944
ENSMAMG00000003546	-	92	34.643	ENSMAMG00000002775	zgc:153654	59	34.643
ENSMAMG00000003546	-	91	35.842	ENSMAMG00000006478	-	62	35.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003546	-	84	52.964	ENSACIG00000015237	-	92	52.964	Amphilophus_citrinellus
ENSMAMG00000003546	-	87	48.289	ENSACIG00000000741	-	91	48.289	Amphilophus_citrinellus
ENSMAMG00000003546	-	86	45.420	ENSACIG00000004501	-	89	45.420	Amphilophus_citrinellus
ENSMAMG00000003546	-	85	48.450	ENSACIG00000004426	-	87	48.450	Amphilophus_citrinellus
ENSMAMG00000003546	-	85	47.674	ENSACIG00000015684	-	90	47.674	Amphilophus_citrinellus
ENSMAMG00000003546	-	85	45.349	ENSACIG00000004521	-	89	45.349	Amphilophus_citrinellus
ENSMAMG00000003546	-	89	44.444	ENSACIG00000004408	-	92	44.444	Amphilophus_citrinellus
ENSMAMG00000003546	-	93	45.614	ENSACIG00000015616	-	99	44.876	Amphilophus_citrinellus
ENSMAMG00000003546	-	89	44.815	ENSACIG00000004444	-	96	44.815	Amphilophus_citrinellus
ENSMAMG00000003546	-	91	51.264	ENSAOCG00000002056	-	90	51.264	Amphiprion_ocellaris
ENSMAMG00000003546	-	93	49.822	ENSAPEG00000021053	-	98	49.822	Amphiprion_percula
ENSMAMG00000003546	-	95	63.481	ENSATEG00000002718	-	87	62.500	Anabas_testudineus
ENSMAMG00000003546	-	91	52.190	ENSATEG00000002869	-	96	52.190	Anabas_testudineus
ENSMAMG00000003546	-	85	43.798	ENSACLG00000027615	-	95	43.798	Astatotilapia_calliptera
ENSMAMG00000003546	-	80	42.739	ENSACLG00000016390	-	91	42.739	Astatotilapia_calliptera
ENSMAMG00000003546	-	89	44.128	ENSACLG00000016487	-	93	44.128	Astatotilapia_calliptera
ENSMAMG00000003546	-	89	59.176	ENSACLG00000018321	-	91	59.176	Astatotilapia_calliptera
ENSMAMG00000003546	-	90	40.809	ENSACLG00000002020	-	97	40.809	Astatotilapia_calliptera
ENSMAMG00000003546	-	91	58.696	ENSACLG00000010292	-	97	58.696	Astatotilapia_calliptera
ENSMAMG00000003546	-	83	36.400	ENSAMXG00000037563	-	87	36.400	Astyanax_mexicanus
ENSMAMG00000003546	-	85	43.023	ENSCSEG00000018832	-	94	43.023	Cynoglossus_semilaevis
ENSMAMG00000003546	-	84	43.023	ENSCVAG00000007214	-	97	43.023	Cyprinodon_variegatus
ENSMAMG00000003546	-	85	43.798	ENSCVAG00000023166	-	96	43.798	Cyprinodon_variegatus
ENSMAMG00000003546	-	95	52.901	ENSCVAG00000016719	-	97	54.064	Cyprinodon_variegatus
ENSMAMG00000003546	-	59	51.955	ENSCVAG00000014640	-	81	51.955	Cyprinodon_variegatus
ENSMAMG00000003546	-	86	33.712	ENSDARG00000095309	si:dkey-79f11.9	92	33.712	Danio_rerio
ENSMAMG00000003546	-	94	38.380	ENSDARG00000095673	si:dkey-79f11.8	86	38.380	Danio_rerio
ENSMAMG00000003546	-	92	37.410	ENSDARG00000093857	si:dkey-79f11.10	87	37.589	Danio_rerio
ENSMAMG00000003546	-	93	34.354	ENSDARG00000029720	si:dkeyp-9d4.2	98	34.014	Danio_rerio
ENSMAMG00000003546	-	92	37.410	ENSDARG00000092634	CABZ01000634.1	94	37.589	Danio_rerio
ENSMAMG00000003546	-	92	36.691	ENSDARG00000075791	si:dkey-79f11.5	88	37.011	Danio_rerio
ENSMAMG00000003546	-	95	34.932	ENSDARG00000010729	CABZ01073795.1	100	34.932	Danio_rerio
ENSMAMG00000003546	-	92	36.331	ENSDARG00000107486	CR855320.3	94	36.525	Danio_rerio
ENSMAMG00000003546	-	70	39.720	ENSDARG00000015678	si:dkeyp-75b4.9	99	39.720	Danio_rerio
ENSMAMG00000003546	-	95	45.918	ENSFHEG00000018069	-	97	45.675	Fundulus_heteroclitus
ENSMAMG00000003546	-	86	46.768	ENSFHEG00000021105	-	87	46.768	Fundulus_heteroclitus
ENSMAMG00000003546	-	88	44.318	ENSFHEG00000018078	-	94	44.318	Fundulus_heteroclitus
ENSMAMG00000003546	-	74	46.053	ENSFHEG00000019992	-	75	46.053	Fundulus_heteroclitus
ENSMAMG00000003546	-	91	48.913	ENSGAFG00000019423	-	78	48.913	Gambusia_affinis
ENSMAMG00000003546	-	81	48.361	ENSGAFG00000019422	-	93	48.361	Gambusia_affinis
ENSMAMG00000003546	-	89	45.756	ENSGACG00000001319	-	99	45.756	Gasterosteus_aculeatus
ENSMAMG00000003546	-	91	45.091	ENSGACG00000012556	-	90	44.561	Gasterosteus_aculeatus
ENSMAMG00000003546	-	91	44.000	ENSGACG00000012548	-	93	43.728	Gasterosteus_aculeatus
ENSMAMG00000003546	-	82	45.344	ENSHBUG00000010945	-	90	45.344	Haplochromis_burtoni
ENSMAMG00000003546	-	65	30.542	ENSIPUG00000006725	-	98	30.542	Ictalurus_punctatus
ENSMAMG00000003546	-	92	40.860	ENSIPUG00000007632	-	80	40.702	Ictalurus_punctatus
ENSMAMG00000003546	-	90	40.809	ENSIPUG00000005624	-	98	40.659	Ictalurus_punctatus
ENSMAMG00000003546	-	93	40.845	ENSIPUG00000006852	-	88	40.690	Ictalurus_punctatus
ENSMAMG00000003546	-	86	40.755	ENSKMAG00000000325	-	92	40.755	Kryptolebias_marmoratus
ENSMAMG00000003546	-	84	47.471	ENSKMAG00000006729	-	93	47.471	Kryptolebias_marmoratus
ENSMAMG00000003546	-	88	40.959	ENSKMAG00000000369	-	97	40.959	Kryptolebias_marmoratus
ENSMAMG00000003546	-	85	48.062	ENSMZEG00005008329	-	96	48.062	Maylandia_zebra
ENSMAMG00000003546	-	89	59.176	ENSMZEG00005015498	-	92	59.176	Maylandia_zebra
ENSMAMG00000003546	-	86	45.977	ENSMZEG00005008301	-	98	44.361	Maylandia_zebra
ENSMAMG00000003546	-	87	47.148	ENSNBRG00000006386	-	98	46.970	Neolamprologus_brichardi
ENSMAMG00000003546	-	87	47.909	ENSNBRG00000022075	-	92	47.909	Neolamprologus_brichardi
ENSMAMG00000003546	-	91	41.455	ENSNBRG00000020744	-	92	41.455	Neolamprologus_brichardi
ENSMAMG00000003546	-	87	45.802	ENSNBRG00000020806	-	88	45.802	Neolamprologus_brichardi
ENSMAMG00000003546	-	90	57.353	ENSNBRG00000023290	-	90	57.353	Neolamprologus_brichardi
ENSMAMG00000003546	-	92	56.475	ENSNBRG00000024253	-	92	56.475	Neolamprologus_brichardi
ENSMAMG00000003546	-	89	43.866	ENSNBRG00000006414	-	89	43.866	Neolamprologus_brichardi
ENSMAMG00000003546	-	83	45.600	ENSNBRG00000020781	-	99	45.600	Neolamprologus_brichardi
ENSMAMG00000003546	-	84	45.850	ENSONIG00000012317	-	99	46.245	Oreochromis_niloticus
ENSMAMG00000003546	-	85	47.674	ENSONIG00000015371	-	99	47.674	Oreochromis_niloticus
ENSMAMG00000003546	-	83	45.600	ENSONIG00000017465	-	99	45.600	Oreochromis_niloticus
ENSMAMG00000003546	-	87	46.565	ENSONIG00000012319	-	99	46.565	Oreochromis_niloticus
ENSMAMG00000003546	-	91	52.158	ENSONIG00000018790	-	99	50.676	Oreochromis_niloticus
ENSMAMG00000003546	-	87	46.008	ENSONIG00000015247	-	91	46.008	Oreochromis_niloticus
ENSMAMG00000003546	-	85	50.775	ENSONIG00000015167	-	98	50.775	Oreochromis_niloticus
ENSMAMG00000003546	-	81	45.306	ENSONIG00000016843	-	98	45.714	Oreochromis_niloticus
ENSMAMG00000003546	-	61	48.387	ENSONIG00000013227	-	100	48.387	Oreochromis_niloticus
ENSMAMG00000003546	-	94	43.007	ENSPMGG00000022341	-	84	43.007	Periophthalmus_magnuspinnatus
ENSMAMG00000003546	-	87	43.939	ENSPMGG00000012906	-	92	43.939	Periophthalmus_magnuspinnatus
ENSMAMG00000003546	-	90	43.682	ENSPMGG00000004994	-	94	43.682	Periophthalmus_magnuspinnatus
ENSMAMG00000003546	-	87	42.910	ENSPMGG00000002695	-	98	42.910	Periophthalmus_magnuspinnatus
ENSMAMG00000003546	-	94	51.724	ENSPFOG00000015382	-	100	51.724	Poecilia_formosa
ENSMAMG00000003546	-	90	45.255	ENSPFOG00000003807	-	94	45.255	Poecilia_formosa
ENSMAMG00000003546	-	90	50.000	ENSPFOG00000015493	-	93	50.000	Poecilia_formosa
ENSMAMG00000003546	-	89	46.642	ENSPFOG00000003841	-	93	46.739	Poecilia_formosa
ENSMAMG00000003546	-	92	45.652	ENSPFOG00000015455	-	91	45.652	Poecilia_formosa
ENSMAMG00000003546	-	87	44.444	ENSPLAG00000018274	-	91	44.444	Poecilia_latipinna
ENSMAMG00000003546	-	93	52.595	ENSPMEG00000018635	-	99	52.778	Poecilia_mexicana
ENSMAMG00000003546	-	85	47.059	ENSPMEG00000018626	-	89	47.059	Poecilia_mexicana
ENSMAMG00000003546	-	91	45.091	ENSPREG00000005137	-	97	45.161	Poecilia_reticulata
ENSMAMG00000003546	-	90	59.420	ENSPNYG00000001584	-	91	60.300	Pundamilia_nyererei
ENSMAMG00000003546	-	92	43.617	ENSPNYG00000024019	-	90	44.364	Pundamilia_nyererei
ENSMAMG00000003546	-	86	49.807	ENSPNYG00000005478	-	88	49.807	Pundamilia_nyererei
ENSMAMG00000003546	-	89	33.214	ENSPNAG00000006327	-	68	33.214	Pygocentrus_nattereri
ENSMAMG00000003546	-	91	39.781	ENSPNAG00000009266	-	98	39.781	Pygocentrus_nattereri
ENSMAMG00000003546	-	89	55.390	ENSSDUG00000002359	-	98	55.390	Seriola_dumerili
ENSMAMG00000003546	-	89	57.407	ENSSDUG00000002417	-	98	57.407	Seriola_dumerili
ENSMAMG00000003546	-	93	54.639	ENSSLDG00000008952	-	95	54.909	Seriola_lalandi_dorsalis
ENSMAMG00000003546	-	91	44.203	ENSSLDG00000016397	-	100	44.203	Seriola_lalandi_dorsalis
ENSMAMG00000003546	-	87	48.120	ENSSPAG00000012915	-	98	48.120	Stegastes_partitus
ENSMAMG00000003546	-	91	47.080	ENSSPAG00000012856	-	95	47.619	Stegastes_partitus
ENSMAMG00000003546	-	57	40.936	ENSXCOG00000003913	-	87	40.936	Xiphophorus_couchianus
ENSMAMG00000003546	-	68	49.275	ENSXCOG00000019639	-	79	49.275	Xiphophorus_couchianus
ENSMAMG00000003546	-	66	44.390	ENSXCOG00000008517	-	62	44.390	Xiphophorus_couchianus
ENSMAMG00000003546	-	91	47.143	ENSXMAG00000029117	-	97	47.143	Xiphophorus_maculatus
ENSMAMG00000003546	-	87	48.669	ENSXMAG00000009971	-	69	47.970	Xiphophorus_maculatus
ENSMAMG00000003546	-	90	51.636	ENSXMAG00000009973	-	93	50.752	Xiphophorus_maculatus