EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003716 (Gene tree)
Gene ID: 113129202
Gene Symbol: -
Alias: -
Full Name: calreticulin-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6903 bases
Position: chrOOHQ01000036.1:11701342-11708244
Accession: 113129202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005490	Calreticulin	PF00262.18	6.8e-84	1	2
ENSMAMP00000005490	Calreticulin	PF00262.18	6.8e-84	2	2
ENSMAMP00000005512	Calreticulin	PF00262.18	4.6e-78	1	2
ENSMAMP00000005512	Calreticulin	PF00262.18	4.6e-78	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005645	-	4331	-	ENSMAMP00000005490	431 (aa)	XP_026160850	UPI000E459186
ENSMAMT00000005666	-	1194	-	ENSMAMP00000005512	397 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003716	-	79	39.163	ENSMAMG00000006473	clgn	60	39.646
ENSMAMG00000003716	-	78	39.178	ENSMAMG00000013509	canx	60	40.922
ENSMAMG00000003716	-	80	74.203	ENSMAMG00000022202	-	85	73.876
ENSMAMG00000003716	-	84	73.352	ENSMAMG00000004470	calr3b	70	73.757

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003716	-	88	86.544	ENSAMXG00000018577	-	86	86.501	Astyanax_mexicanus
ENSMAMG00000003716	-	80	78.613	ENSCAFG00000017093	CALR	89	76.519	Canis_familiaris
ENSMAMG00000003716	-	84	79.063	ENSCPBG00000023916	-	85	84.395	Chrysemys_picta_bellii
ENSMAMG00000003716	-	83	75.487	ENSDARG00000103979	calr3a	86	75.487	Danio_rerio
ENSMAMG00000003716	-	78	32.759	FBgn0264077	Cnx14D	62	32.419	Drosophila_melanogaster
ENSMAMG00000003716	-	87	66.844	FBgn0005585	Calr	88	66.942	Drosophila_melanogaster
ENSMAMG00000003716	-	83	70.391	ENSEBUG00000008568	calr3a	84	68.785	Eptatretus_burgeri
ENSMAMG00000003716	-	83	85.671	ENSELUG00000008294	-	86	85.671	Esox_lucius
ENSMAMG00000003716	-	88	84.319	ENSFHEG00000000123	-	85	84.722	Fundulus_heteroclitus
ENSMAMG00000003716	-	100	88.435	ENSMMOG00000020031	-	83	92.582	Mola_mola
ENSMAMG00000003716	-	88	76.517	ENSMLUG00000012776	-	86	76.880	Myotis_lucifugus
ENSMAMG00000003716	-	84	79.558	ENSORLG00000017171	-	84	80.110	Oryzias_latipes
ENSMAMG00000003716	-	84	92.265	ENSOMEG00000010424	-	85	92.265	Oryzias_melastigma
ENSMAMG00000003716	-	88	78.796	ENSPSIG00000012928	-	100	75.682	Pelodiscus_sinensis
ENSMAMG00000003716	-	80	39.120	ENSPSIG00000003895	-	71	38.480	Pelodiscus_sinensis
ENSMAMG00000003716	-	77	38.987	ENSPSIG00000009344	-	61	39.086	Pelodiscus_sinensis
ENSMAMG00000003716	-	84	85.912	ENSPNAG00000016813	-	86	85.912	Pygocentrus_nattereri
ENSMAMG00000003716	-	100	68.445	ENSSMAG00000005047	calr3a	83	71.951	Scophthalmus_maximus
ENSMAMG00000003716	-	79	39.163	ENSSDUG00000002378	-	56	39.163	Seriola_dumerili
ENSMAMG00000003716	-	81	37.871	ENSSLDG00000020527	-	70	38.366	Seriola_lalandi_dorsalis
ENSMAMG00000003716	-	100	88.863	ENSTRUG00000004597	-	84	90.608	Takifugu_rubripes
ENSMAMG00000003716	-	77	38.287	ENSTRUG00000003449	-	54	38.287	Takifugu_rubripes
ENSMAMG00000003716	-	84	76.033	ENSXETG00000007937	calr	87	76.243	Xenopus_tropicalis