EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000003770 (Gene tree)
Gene ID: 113126540
Gene Symbol: si:ch1073-296d18.1
Alias: -
Full Name: si:ch1073-296d18.1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 7522 bases
Position: chrOOHQ01000103.1:5490815-5498336
Accession: ZDB-GENE-120215-181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005557	PARP	PF00644.20	1.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005712	-	5289	-	ENSMAMP00000005557	1005 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000003770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003770	si:ch1073-296d18.1	88	66.555	ENSAPOG00000016910	si:ch1073-296d18.1	80	66.555	Acanthochromis_polyacanthus
ENSMAMG00000003770	si:ch1073-296d18.1	76	93.532	ENSAOCG00000007023	-	100	93.532	Amphiprion_ocellaris
ENSMAMG00000003770	si:ch1073-296d18.1	64	72.111	ENSAPEG00000005731	si:ch1073-296d18.1	100	72.111	Amphiprion_percula
ENSMAMG00000003770	si:ch1073-296d18.1	89	71.715	ENSATEG00000011078	si:ch1073-296d18.1	80	71.715	Anabas_testudineus
ENSMAMG00000003770	si:ch1073-296d18.1	69	92.935	ENSACLG00000012196	-	100	92.935	Astatotilapia_calliptera
ENSMAMG00000003770	si:ch1073-296d18.1	98	45.553	ENSAMXG00000039891	si:ch1073-296d18.1	89	45.059	Astyanax_mexicanus
ENSMAMG00000003770	si:ch1073-296d18.1	86	40.959	ENSCPBG00000004075	PARP10	98	31.863	Chrysemys_picta_bellii
ENSMAMG00000003770	si:ch1073-296d18.1	70	88.060	ENSCVAG00000014098	-	100	88.060	Cyprinodon_variegatus
ENSMAMG00000003770	si:ch1073-296d18.1	98	45.212	ENSDARG00000087145	si:ch1073-296d18.1	99	50.736	Danio_rerio
ENSMAMG00000003770	si:ch1073-296d18.1	98	52.217	ENSELUG00000001455	si:ch1073-296d18.1	55	81.646	Esox_lucius
ENSMAMG00000003770	si:ch1073-296d18.1	57	67.073	ENSFHEG00000016698	-	92	67.073	Fundulus_heteroclitus
ENSMAMG00000003770	si:ch1073-296d18.1	58	73.846	ENSGMOG00000000853	si:ch1073-296d18.1	58	73.846	Gadus_morhua
ENSMAMG00000003770	si:ch1073-296d18.1	74	81.481	ENSGACG00000008798	si:ch1073-296d18.1	67	86.667	Gasterosteus_aculeatus
ENSMAMG00000003770	si:ch1073-296d18.1	50	75.244	ENSHBUG00000018913	-	100	75.244	Haplochromis_burtoni
ENSMAMG00000003770	si:ch1073-296d18.1	98	44.646	ENSIPUG00000011187	parp10	81	44.332	Ictalurus_punctatus
ENSMAMG00000003770	si:ch1073-296d18.1	98	66.137	ENSKMAG00000002066	si:ch1073-296d18.1	82	66.137	Kryptolebias_marmoratus
ENSMAMG00000003770	si:ch1073-296d18.1	59	93.617	ENSLBEG00000003798	si:ch1073-296d18.1	97	93.617	Labrus_bergylta
ENSMAMG00000003770	si:ch1073-296d18.1	57	42.400	ENSLACG00000008645	PARP10	51	49.215	Latimeria_chalumnae
ENSMAMG00000003770	si:ch1073-296d18.1	87	74.872	ENSLOCG00000008505	si:ch1073-296d18.1	67	74.872	Lepisosteus_oculatus
ENSMAMG00000003770	si:ch1073-296d18.1	50	75.244	ENSMZEG00005001245	-	100	75.244	Maylandia_zebra
ENSMAMG00000003770	si:ch1073-296d18.1	90	92.462	ENSNBRG00000000940	si:ch1073-296d18.1	88	92.462	Neolamprologus_brichardi
ENSMAMG00000003770	si:ch1073-296d18.1	72	91.089	ENSONIG00000007669	si:ch1073-296d18.1	71	91.089	Oreochromis_niloticus
ENSMAMG00000003770	si:ch1073-296d18.1	98	59.054	ENSORLG00015010006	si:ch1073-296d18.1	91	59.155	Oryzias_latipes_hsok
ENSMAMG00000003770	si:ch1073-296d18.1	88	57.883	ENSOMEG00000011731	si:ch1073-296d18.1	80	57.883	Oryzias_melastigma
ENSMAMG00000003770	si:ch1073-296d18.1	99	63.682	ENSPFOG00000013067	si:ch1073-296d18.1	79	88.119	Poecilia_formosa
ENSMAMG00000003770	si:ch1073-296d18.1	70	88.500	ENSPLAG00000022710	-	98	88.500	Poecilia_latipinna
ENSMAMG00000003770	si:ch1073-296d18.1	70	88.500	ENSPMEG00000019504	-	98	88.500	Poecilia_mexicana
ENSMAMG00000003770	si:ch1073-296d18.1	69	85.326	ENSPNYG00000005086	-	100	85.326	Pundamilia_nyererei
ENSMAMG00000003770	si:ch1073-296d18.1	98	46.446	ENSPNAG00000024484	si:ch1073-296d18.1	82	46.955	Pygocentrus_nattereri
ENSMAMG00000003770	si:ch1073-296d18.1	60	72.562	ENSSMAG00000020545	-	99	72.562	Scophthalmus_maximus
ENSMAMG00000003770	si:ch1073-296d18.1	68	94.030	ENSSLDG00000003545	-	100	94.030	Seriola_lalandi_dorsalis
ENSMAMG00000003770	si:ch1073-296d18.1	68	84.513	ENSSPAG00000005439	-	99	92.079	Stegastes_partitus
ENSMAMG00000003770	si:ch1073-296d18.1	81	43.280	ENSTNIG00000014023	si:ch1073-296d18.1	67	43.280	Tetraodon_nigroviridis
ENSMAMG00000003770	si:ch1073-296d18.1	70	88.500	ENSXCOG00000003615	-	98	88.500	Xiphophorus_couchianus
ENSMAMG00000003770	si:ch1073-296d18.1	70	88.500	ENSXMAG00000025112	-	98	88.500	Xiphophorus_maculatus