EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000003857 (Gene tree)
Gene ID: 113131073
Gene Symbol: snrpc
Alias: U1C|chunp6909|zgc:109792
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6436 bases
Position: chrOOHQ01000082.1:6330325-6336760
Accession: 113131073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005672	zf-U1	PF06220.12	1.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000005830	-	3441	-	ENSMAMP00000005672	148 (aa)	XP_026163911	UPI000E454DE9

Gene Model

Click here to download ENSMAMG00000003857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003857	snrpc	100	99.324	ENSAPOG00000013907	snrpc	100	99.324	Acanthochromis_polyacanthus
ENSMAMG00000003857	snrpc	100	99.324	ENSAOCG00000021151	snrpc	100	99.324	Amphiprion_ocellaris
ENSMAMG00000003857	snrpc	100	99.324	ENSAPEG00000023221	snrpc	100	99.324	Amphiprion_percula
ENSMAMG00000003857	snrpc	100	99.324	ENSATEG00000025133	snrpc	100	99.324	Anabas_testudineus
ENSMAMG00000003857	snrpc	100	97.315	ENSACLG00000000843	snrpc	100	97.315	Astatotilapia_calliptera
ENSMAMG00000003857	snrpc	100	96.644	ENSCSEG00000016845	snrpc	100	96.644	Cynoglossus_semilaevis
ENSMAMG00000003857	snrpc	100	98.649	ENSCVAG00000014297	snrpc	100	98.649	Cyprinodon_variegatus
ENSMAMG00000003857	snrpc	74	99.083	ENSFHEG00000016667	snrpc	97	99.083	Fundulus_heteroclitus
ENSMAMG00000003857	snrpc	99	96.575	ENSGMOG00000000090	snrpc	100	96.575	Gadus_morhua
ENSMAMG00000003857	snrpc	100	98.649	ENSGAFG00000016115	snrpc	100	98.649	Gambusia_affinis
ENSMAMG00000003857	snrpc	99	98.630	ENSGACG00000004899	snrpc	98	98.630	Gasterosteus_aculeatus
ENSMAMG00000003857	snrpc	100	97.315	ENSHBUG00000011637	snrpc	100	97.315	Haplochromis_burtoni
ENSMAMG00000003857	snrpc	100	91.892	ENSHCOG00000001596	snrpc	100	85.811	Hippocampus_comes
ENSMAMG00000003857	snrpc	100	98.649	ENSKMAG00000016356	snrpc	100	98.649	Kryptolebias_marmoratus
ENSMAMG00000003857	snrpc	100	98.658	ENSLBEG00000023881	snrpc	100	98.658	Labrus_bergylta
ENSMAMG00000003857	snrpc	97	59.589	ENSMLEG00000039724	-	81	52.778	Mandrillus_leucophaeus
ENSMAMG00000003857	snrpc	100	97.315	ENSMZEG00005002199	snrpc	100	97.315	Maylandia_zebra
ENSMAMG00000003857	snrpc	98	97.931	ENSMMOG00000013149	snrpc	100	97.931	Mola_mola
ENSMAMG00000003857	snrpc	100	97.297	ENSMALG00000001197	snrpc	100	97.297	Monopterus_albus
ENSMAMG00000003857	snrpc	100	97.315	ENSONIG00000014757	snrpc	100	97.315	Oreochromis_niloticus
ENSMAMG00000003857	snrpc	96	97.183	ENSORLG00000007308	snrpc	97	97.183	Oryzias_latipes
ENSMAMG00000003857	snrpc	96	96.503	ENSORLG00020012607	SNRPC	97	96.503	Oryzias_latipes_hni
ENSMAMG00000003857	snrpc	75	97.297	ENSOMEG00000012014	snrpc	69	97.297	Oryzias_melastigma
ENSMAMG00000003857	snrpc	97	66.013	ENSOGAG00000028405	-	99	63.816	Otolemur_garnettii
ENSMAMG00000003857	snrpc	98	95.862	ENSPMGG00000022162	snrpc	100	95.862	Periophthalmus_magnuspinnatus
ENSMAMG00000003857	snrpc	100	98.649	ENSPFOG00000015174	snrpc	100	98.649	Poecilia_formosa
ENSMAMG00000003857	snrpc	100	98.649	ENSPLAG00000012311	snrpc	100	98.649	Poecilia_latipinna
ENSMAMG00000003857	snrpc	100	98.649	ENSPMEG00000010274	snrpc	100	98.649	Poecilia_mexicana
ENSMAMG00000003857	snrpc	99	84.247	ENSPREG00000013017	snrpc	79	84.247	Poecilia_reticulata
ENSMAMG00000003857	snrpc	100	83.019	ENSPNAG00000012799	snrpc	100	73.684	Pygocentrus_nattereri
ENSMAMG00000003857	snrpc	100	99.324	ENSSMAG00000008029	snrpc	100	99.324	Scophthalmus_maximus
ENSMAMG00000003857	snrpc	100	99.324	ENSSDUG00000018895	snrpc	81	99.324	Seriola_dumerili
ENSMAMG00000003857	snrpc	100	99.324	ENSSLDG00000005034	snrpc	100	99.324	Seriola_lalandi_dorsalis
ENSMAMG00000003857	snrpc	100	99.324	ENSSPAG00000000914	snrpc	100	99.324	Stegastes_partitus
ENSMAMG00000003857	snrpc	100	96.622	ENSTRUG00000021651	snrpc	100	96.622	Takifugu_rubripes
ENSMAMG00000003857	snrpc	100	98.649	ENSXMAG00000017935	snrpc	100	98.649	Xiphophorus_maculatus