EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000003909 (Gene tree)
Gene ID: 113122232
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 65902 bases
Position: chrOOHQ01000075.1:6316865-6382766
Accession: 113122232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006015	ResIII	PF04851.15	6.1e-06	1	1
ENSMAMP00000005907	ResIII	PF04851.15	2.6e-05	1	1
ENSMAMP00000005907	BRK	PF07533.16	8.8e-32	1	2
ENSMAMP00000005907	BRK	PF07533.16	8.8e-32	2	2
ENSMAMP00000006015	BRK	PF07533.16	6.8e-31	1	2
ENSMAMP00000006015	BRK	PF07533.16	6.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006188	-	8376	-	ENSMAMP00000006015	2791 (aa)	-	-
ENSMAMT00000006074	-	12768	XM_026293399	ENSMAMP00000005907	2987 (aa)	XP_026149184	UPI000E454AE5

Gene Model

Click here to download ENSMAMG00000003909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000003909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000003909	chd9	60	60.145	ENSMAMG00000016297	chd8	67	61.656
ENSMAMG00000003909	chd9	70	70.119	ENSMAMG00000011569	chd7	59	71.793
ENSMAMG00000003909	chd9	61	76.667	ENSMAMG00000013111	chd6	53	76.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000003909	chd9	99	60.467	ENSG00000177200	CHD9	95	70.329	Homo_sapiens
ENSMAMG00000003909	chd9	99	87.754	ENSAPOG00000023034	chd9	99	92.139	Acanthochromis_polyacanthus
ENSMAMG00000003909	chd9	99	61.135	ENSAMEG00000016232	CHD9	79	71.086	Ailuropoda_melanoleuca
ENSMAMG00000003909	chd9	99	80.711	ENSACIG00000004097	chd9	98	81.356	Amphilophus_citrinellus
ENSMAMG00000003909	chd9	99	88.722	ENSAOCG00000005487	chd9	99	92.283	Amphiprion_ocellaris
ENSMAMG00000003909	chd9	99	88.822	ENSAPEG00000009859	chd9	99	92.382	Amphiprion_percula
ENSMAMG00000003909	chd9	99	89.773	ENSATEG00000002748	chd9	99	89.428	Anabas_testudineus
ENSMAMG00000003909	chd9	99	61.364	ENSAPLG00000002826	CHD9	56	77.406	Anas_platyrhynchos
ENSMAMG00000003909	chd9	65	72.439	ENSACAG00000016150	CHD9	83	70.445	Anolis_carolinensis
ENSMAMG00000003909	chd9	99	60.614	ENSANAG00000015630	CHD9	91	68.662	Aotus_nancymaae
ENSMAMG00000003909	chd9	99	83.403	ENSACLG00000016899	chd9	99	83.414	Astatotilapia_calliptera
ENSMAMG00000003909	chd9	96	70.722	ENSAMXG00000005652	chd9	99	76.806	Astyanax_mexicanus
ENSMAMG00000003909	chd9	97	61.466	ENSBTAG00000002287	CHD9	79	69.712	Bos_taurus
ENSMAMG00000003909	chd9	99	60.539	ENSCJAG00000001573	CHD9	91	69.014	Callithrix_jacchus
ENSMAMG00000003909	chd9	96	61.661	ENSCAFG00000009699	CHD9	79	70.350	Canis_familiaris
ENSMAMG00000003909	chd9	96	61.661	ENSCAFG00020002879	CHD9	91	69.718	Canis_lupus_dingo
ENSMAMG00000003909	chd9	96	60.889	ENSTSYG00000007693	CHD9	91	69.366	Carlito_syrichta
ENSMAMG00000003909	chd9	74	56.900	ENSCAPG00000011604	CHD9	65	59.830	Cavia_aperea
ENSMAMG00000003909	chd9	73	59.303	ENSCPOG00000036544	CHD9	84	66.566	Cavia_porcellus
ENSMAMG00000003909	chd9	73	62.701	ENSCCAG00000036178	CHD9	91	69.965	Cebus_capucinus
ENSMAMG00000003909	chd9	73	62.483	ENSCATG00000036753	CHD9	91	69.097	Cercocebus_atys
ENSMAMG00000003909	chd9	99	60.525	ENSCLAG00000007137	CHD9	94	82.005	Chinchilla_lanigera
ENSMAMG00000003909	chd9	73	62.437	ENSCSAG00000005311	CHD9	84	70.247	Chlorocebus_sabaeus
ENSMAMG00000003909	chd9	68	91.146	ENSCHOG00000003935	CHD9	55	91.099	Choloepus_hoffmanni
ENSMAMG00000003909	chd9	90	82.366	ENSCPBG00000012459	CHD9	93	78.557	Chrysemys_picta_bellii
ENSMAMG00000003909	chd9	97	61.190	ENSCANG00000030349	CHD9	91	69.718	Colobus_angolensis_palliatus
ENSMAMG00000003909	chd9	99	60.575	ENSCGRG00001016150	Chd9	85	69.850	Cricetulus_griseus_chok1gshd
ENSMAMG00000003909	chd9	99	60.575	ENSCGRG00000012850	Chd9	94	82.126	Cricetulus_griseus_crigri
ENSMAMG00000003909	chd9	99	82.347	ENSCSEG00000009209	chd9	99	85.300	Cynoglossus_semilaevis
ENSMAMG00000003909	chd9	97	81.877	ENSCVAG00000016195	chd9	99	80.549	Cyprinodon_variegatus
ENSMAMG00000003909	chd9	82	75.518	ENSDARG00000074498	chd9	99	75.761	Danio_rerio
ENSMAMG00000003909	chd9	79	69.178	ENSDNOG00000006045	CHD9	94	71.316	Dasypus_novemcinctus
ENSMAMG00000003909	chd9	69	68.112	ENSDORG00000008523	-	96	70.080	Dipodomys_ordii
ENSMAMG00000003909	chd9	65	91.270	ENSETEG00000009565	CHD9	76	91.270	Echinops_telfairi
ENSMAMG00000003909	chd9	87	78.211	ENSEASG00005014832	CHD9	95	78.675	Equus_asinus_asinus
ENSMAMG00000003909	chd9	73	62.821	ENSECAG00000011505	CHD9	84	69.017	Equus_caballus
ENSMAMG00000003909	chd9	81	86.087	ENSEEUG00000014515	CHD9	68	83.425	Erinaceus_europaeus
ENSMAMG00000003909	chd9	87	80.362	ENSELUG00000006031	chd9	99	78.394	Esox_lucius
ENSMAMG00000003909	chd9	97	61.711	ENSFCAG00000022534	CHD9	91	70.070	Felis_catus
ENSMAMG00000003909	chd9	84	69.027	ENSFALG00000013276	CHD9	95	71.033	Ficedula_albicollis
ENSMAMG00000003909	chd9	99	60.033	ENSFDAG00000021037	CHD9	79	70.244	Fukomys_damarensis
ENSMAMG00000003909	chd9	99	81.812	ENSFHEG00000006068	chd9	99	87.747	Fundulus_heteroclitus
ENSMAMG00000003909	chd9	68	84.997	ENSGMOG00000006040	chd9	84	85.966	Gadus_morhua
ENSMAMG00000003909	chd9	95	62.575	ENSGALG00000039178	CHD9	85	71.248	Gallus_gallus
ENSMAMG00000003909	chd9	99	82.578	ENSGAFG00000010014	chd9	99	88.624	Gambusia_affinis
ENSMAMG00000003909	chd9	81	86.317	ENSGACG00000016694	chd9	97	88.800	Gasterosteus_aculeatus
ENSMAMG00000003909	chd9	99	60.454	ENSGGOG00000014816	CHD9	91	69.366	Gorilla_gorilla
ENSMAMG00000003909	chd9	99	82.966	ENSHBUG00000023322	chd9	99	89.657	Haplochromis_burtoni
ENSMAMG00000003909	chd9	98	60.731	ENSHGLG00000014938	CHD9	94	79.879	Heterocephalus_glaber_female
ENSMAMG00000003909	chd9	97	79.401	ENSHCOG00000000937	chd9	97	84.660	Hippocampus_comes
ENSMAMG00000003909	chd9	82	77.751	ENSIPUG00000016448	chd9	97	81.404	Ictalurus_punctatus
ENSMAMG00000003909	chd9	97	61.151	ENSSTOG00000022273	CHD9	94	82.246	Ictidomys_tridecemlineatus
ENSMAMG00000003909	chd9	66	70.020	ENSJJAG00000015741	-	96	69.980	Jaculus_jaculus
ENSMAMG00000003909	chd9	97	84.476	ENSKMAG00000016784	chd9	99	89.068	Kryptolebias_marmoratus
ENSMAMG00000003909	chd9	92	87.284	ENSLBEG00000012077	chd9	99	90.436	Labrus_bergylta
ENSMAMG00000003909	chd9	97	59.257	ENSLACG00000005557	CHD9	88	66.158	Latimeria_chalumnae
ENSMAMG00000003909	chd9	90	72.379	ENSLOCG00000007225	chd9	98	75.910	Lepisosteus_oculatus
ENSMAMG00000003909	chd9	73	62.369	ENSLAFG00000015374	CHD9	79	69.563	Loxodonta_africana
ENSMAMG00000003909	chd9	77	70.294	ENSMFAG00000041354	CHD9	92	70.899	Macaca_fascicularis
ENSMAMG00000003909	chd9	73	62.454	ENSMMUG00000016310	CHD9	91	69.718	Macaca_mulatta
ENSMAMG00000003909	chd9	89	61.748	ENSMNEG00000031494	CHD9	80	72.584	Macaca_nemestrina
ENSMAMG00000003909	chd9	73	62.483	ENSMLEG00000043219	CHD9	91	69.718	Mandrillus_leucophaeus
ENSMAMG00000003909	chd9	99	86.358	ENSMZEG00005006581	chd9	99	91.313	Maylandia_zebra
ENSMAMG00000003909	chd9	94	58.809	ENSMGAG00000004642	CHD9	59	72.606	Meleagris_gallopavo
ENSMAMG00000003909	chd9	96	61.704	ENSMICG00000016679	CHD9	91	70.070	Microcebus_murinus
ENSMAMG00000003909	chd9	99	81.604	ENSMMOG00000016406	chd9	99	82.483	Mola_mola
ENSMAMG00000003909	chd9	73	65.509	ENSMODG00000013142	-	96	77.627	Monodelphis_domestica
ENSMAMG00000003909	chd9	97	87.645	ENSMALG00000013306	chd9	99	85.253	Monopterus_albus
ENSMAMG00000003909	chd9	96	61.835	MGP_CAROLIEiJ_G0031364	Chd9	92	70.030	Mus_caroli
ENSMAMG00000003909	chd9	99	60.622	ENSMUSG00000056608	Chd9	94	81.016	Mus_musculus
ENSMAMG00000003909	chd9	96	61.325	MGP_PahariEiJ_G0022964	Chd9	92	69.384	Mus_pahari
ENSMAMG00000003909	chd9	73	62.976	ENSMPUG00000003285	CHD9	79	70.155	Mustela_putorius_furo
ENSMAMG00000003909	chd9	99	60.343	ENSMLUG00000004456	CHD9	78	70.039	Myotis_lucifugus
ENSMAMG00000003909	chd9	99	85.524	ENSNBRG00000009423	chd9	99	90.222	Neolamprologus_brichardi
ENSMAMG00000003909	chd9	89	61.868	ENSNLEG00000001026	CHD9	86	71.550	Nomascus_leucogenys
ENSMAMG00000003909	chd9	67	93.985	ENSMEUG00000008222	-	74	90.446	Notamacropus_eugenii
ENSMAMG00000003909	chd9	55	93.985	ENSOPRG00000011168	CHD9	70	85.475	Ochotona_princeps
ENSMAMG00000003909	chd9	99	60.874	ENSODEG00000004466	CHD9	80	69.677	Octodon_degus
ENSMAMG00000003909	chd9	81	89.195	ENSONIG00000002816	chd9	98	89.770	Oreochromis_niloticus
ENSMAMG00000003909	chd9	73	63.324	ENSOANG00000013401	CHD9	79	71.681	Ornithorhynchus_anatinus
ENSMAMG00000003909	chd9	83	67.459	ENSOCUG00000001016	CHD9	94	69.992	Oryctolagus_cuniculus
ENSMAMG00000003909	chd9	97	82.988	ENSORLG00000013810	chd9	96	86.411	Oryzias_latipes
ENSMAMG00000003909	chd9	97	78.212	ENSORLG00020020665	chd9	96	79.443	Oryzias_latipes_hni
ENSMAMG00000003909	chd9	98	82.199	ENSORLG00015019126	chd9	95	89.141	Oryzias_latipes_hsok
ENSMAMG00000003909	chd9	64	79.516	ENSOMEG00000015978	chd9	99	79.570	Oryzias_melastigma
ENSMAMG00000003909	chd9	97	61.448	ENSOGAG00000002110	CHD9	79	69.514	Otolemur_garnettii
ENSMAMG00000003909	chd9	97	61.404	ENSOARG00000017664	CHD9	79	69.605	Ovis_aries
ENSMAMG00000003909	chd9	82	68.169	ENSPPAG00000039388	-	96	69.545	Pan_paniscus
ENSMAMG00000003909	chd9	97	61.639	ENSPPRG00000004801	CHD9	91	69.718	Panthera_pardus
ENSMAMG00000003909	chd9	97	60.732	ENSPTIG00000021854	CHD9	91	60.915	Panthera_tigris_altaica
ENSMAMG00000003909	chd9	99	60.467	ENSPTRG00000008113	CHD9	91	69.366	Pan_troglodytes
ENSMAMG00000003909	chd9	82	67.766	ENSPANG00000019307	CHD9	95	70.064	Papio_anubis
ENSMAMG00000003909	chd9	99	63.108	ENSPKIG00000025401	-	97	64.004	Paramormyrops_kingsleyae
ENSMAMG00000003909	chd9	96	75.133	ENSPKIG00000021876	chd9	96	78.295	Paramormyrops_kingsleyae
ENSMAMG00000003909	chd9	64	63.113	ENSPSIG00000008099	CHD9	89	78.009	Pelodiscus_sinensis
ENSMAMG00000003909	chd9	88	62.100	ENSPCIG00000017215	CHD9	94	76.650	Phascolarctos_cinereus
ENSMAMG00000003909	chd9	99	82.477	ENSPFOG00000015839	chd9	99	83.194	Poecilia_formosa
ENSMAMG00000003909	chd9	99	82.700	ENSPLAG00000011118	chd9	99	88.745	Poecilia_latipinna
ENSMAMG00000003909	chd9	99	79.873	ENSPMEG00000015106	chd9	99	80.720	Poecilia_mexicana
ENSMAMG00000003909	chd9	97	84.432	ENSPREG00000006473	chd9	99	88.768	Poecilia_reticulata
ENSMAMG00000003909	chd9	99	60.461	ENSPPYG00000007348	CHD9	85	70.064	Pongo_abelii
ENSMAMG00000003909	chd9	73	79.529	ENSPCAG00000007564	CHD9	74	81.767	Procavia_capensis
ENSMAMG00000003909	chd9	73	60.840	ENSPCOG00000028433	CHD9	91	69.014	Propithecus_coquereli
ENSMAMG00000003909	chd9	94	58.383	ENSPVAG00000015617	CHD9	81	73.997	Pteropus_vampyrus
ENSMAMG00000003909	chd9	99	86.820	ENSPNYG00000010947	chd9	99	91.431	Pundamilia_nyererei
ENSMAMG00000003909	chd9	99	70.095	ENSPNAG00000024141	chd9	97	79.131	Pygocentrus_nattereri
ENSMAMG00000003909	chd9	89	60.249	ENSRNOG00000049302	Chd9	84	69.100	Rattus_norvegicus
ENSMAMG00000003909	chd9	81	68.690	ENSRBIG00000035553	CHD9	96	70.064	Rhinopithecus_bieti
ENSMAMG00000003909	chd9	80	69.745	ENSRROG00000033278	CHD9	96	70.233	Rhinopithecus_roxellana
ENSMAMG00000003909	chd9	99	60.756	ENSSBOG00000030240	CHD9	91	69.014	Saimiri_boliviensis_boliviensis
ENSMAMG00000003909	chd9	99	60.692	ENSSHAG00000002719	CHD9	84	70.508	Sarcophilus_harrisii
ENSMAMG00000003909	chd9	98	65.731	ENSSFOG00015001327	chd9	96	74.401	Scleropages_formosus
ENSMAMG00000003909	chd9	97	69.856	ENSSFOG00015020209	chd9	97	78.340	Scleropages_formosus
ENSMAMG00000003909	chd9	97	87.322	ENSSMAG00000008953	chd9	99	91.515	Scophthalmus_maximus
ENSMAMG00000003909	chd9	99	88.668	ENSSDUG00000006139	chd9	99	92.367	Seriola_dumerili
ENSMAMG00000003909	chd9	99	89.195	ENSSLDG00000017818	chd9	99	92.851	Seriola_lalandi_dorsalis
ENSMAMG00000003909	chd9	70	77.026	ENSSARG00000010632	CHD9	53	77.425	Sorex_araneus
ENSMAMG00000003909	chd9	93	89.649	ENSSPAG00000021649	chd9	99	92.305	Stegastes_partitus
ENSMAMG00000003909	chd9	99	59.602	ENSSSCG00000033591	CHD9	57	75.636	Sus_scrofa
ENSMAMG00000003909	chd9	88	63.209	ENSTGUG00000007476	CHD9	80	73.439	Taeniopygia_guttata
ENSMAMG00000003909	chd9	99	80.294	ENSTRUG00000009125	chd9	99	80.381	Takifugu_rubripes
ENSMAMG00000003909	chd9	56	87.081	ENSTNIG00000003825	chd9	84	99.408	Tetraodon_nigroviridis
ENSMAMG00000003909	chd9	53	94.915	ENSTBEG00000016052	-	59	94.915	Tupaia_belangeri
ENSMAMG00000003909	chd9	88	61.380	ENSTTRG00000012674	CHD9	77	70.514	Tursiops_truncatus
ENSMAMG00000003909	chd9	64	65.904	ENSUAMG00000022706	CHD9	95	68.258	Ursus_americanus
ENSMAMG00000003909	chd9	67	86.059	ENSUMAG00000004043	CHD9	95	86.421	Ursus_maritimus
ENSMAMG00000003909	chd9	95	69.011	ENSVPAG00000001374	CHD9	76	69.572	Vicugna_pacos
ENSMAMG00000003909	chd9	96	61.626	ENSVVUG00000019435	CHD9	79	70.308	Vulpes_vulpes
ENSMAMG00000003909	chd9	99	59.364	ENSXETG00000000349	chd9	78	76.190	Xenopus_tropicalis
ENSMAMG00000003909	chd9	80	88.751	ENSXCOG00000012997	chd9	99	88.019	Xiphophorus_couchianus
ENSMAMG00000003909	chd9	97	84.295	ENSXMAG00000016192	chd9	99	89.283	Xiphophorus_maculatus