EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000004040 (Gene tree)
Gene ID: 113122733
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 12178 bases
Position: chrOOHQ01000075.1:21380017-21392194
Accession: 113122733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000005929	POP1	PF06978.11	2.7e-36	1	2
ENSMAMP00000005929	POP1	PF06978.11	2.7e-36	2	2
ENSMAMP00000005929	POPLD	PF08170.12	1.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006098	-	7436	-	ENSMAMP00000005929	983 (aa)	XP_026150054	UPI000E460B7D

Gene Model

Click here to download ENSMAMG00000004040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004040	pop1	100	47.214	ENSG00000104356	POP1	100	47.214	Homo_sapiens
ENSMAMG00000004040	pop1	100	78.687	ENSAPOG00000008198	pop1	100	79.192	Acanthochromis_polyacanthus
ENSMAMG00000004040	pop1	100	47.288	ENSAMEG00000000556	POP1	100	47.048	Ailuropoda_melanoleuca
ENSMAMG00000004040	pop1	100	72.105	ENSACIG00000004169	POP1	100	71.847	Amphilophus_citrinellus
ENSMAMG00000004040	pop1	100	78.788	ENSAOCG00000010991	pop1	100	79.293	Amphiprion_ocellaris
ENSMAMG00000004040	pop1	100	71.715	ENSAPEG00000007607	pop1	100	71.414	Amphiprion_percula
ENSMAMG00000004040	pop1	100	79.539	ENSATEG00000024814	POP1	100	79.739	Anabas_testudineus
ENSMAMG00000004040	pop1	93	49.533	ENSAPLG00000014418	POP1	99	49.325	Anas_platyrhynchos
ENSMAMG00000004040	pop1	100	46.750	ENSACAG00000016083	POP1	100	46.750	Anolis_carolinensis
ENSMAMG00000004040	pop1	87	52.994	ENSANAG00000026360	POP1	99	52.994	Aotus_nancymaae
ENSMAMG00000004040	pop1	100	75.050	ENSACLG00000010951	pop1	100	76.157	Astatotilapia_calliptera
ENSMAMG00000004040	pop1	100	56.796	ENSAMXG00000014483	POP1	100	56.683	Astyanax_mexicanus
ENSMAMG00000004040	pop1	100	47.764	ENSBTAG00000012596	POP1	100	47.143	Bos_taurus
ENSMAMG00000004040	pop1	75	31.890	WBGene00015486	C05D11.9	83	33.962	Caenorhabditis_elegans
ENSMAMG00000004040	pop1	100	47.323	ENSCJAG00000015567	POP1	100	46.762	Callithrix_jacchus
ENSMAMG00000004040	pop1	100	47.996	ENSCAFG00000000469	POP1	100	47.801	Canis_familiaris
ENSMAMG00000004040	pop1	100	46.806	ENSCAFG00020026765	POP1	100	46.520	Canis_lupus_dingo
ENSMAMG00000004040	pop1	100	47.338	ENSCHIG00000017066	POP1	100	47.588	Capra_hircus
ENSMAMG00000004040	pop1	100	46.154	ENSTSYG00000003097	POP1	100	46.139	Carlito_syrichta
ENSMAMG00000004040	pop1	100	45.498	ENSCAPG00000007251	POP1	100	45.118	Cavia_aperea
ENSMAMG00000004040	pop1	100	46.578	ENSCPOG00000002901	POP1	100	46.198	Cavia_porcellus
ENSMAMG00000004040	pop1	100	47.217	ENSCCAG00000018939	POP1	100	47.121	Cebus_capucinus
ENSMAMG00000004040	pop1	100	46.780	ENSCATG00000040916	POP1	100	46.780	Cercocebus_atys
ENSMAMG00000004040	pop1	100	46.825	ENSCLAG00000007208	POP1	97	46.445	Chinchilla_lanigera
ENSMAMG00000004040	pop1	91	49.263	ENSCSAG00000012340	POP1	98	49.414	Chlorocebus_sabaeus
ENSMAMG00000004040	pop1	93	46.949	ENSCHOG00000011432	POP1	96	47.053	Choloepus_hoffmanni
ENSMAMG00000004040	pop1	100	49.617	ENSCPBG00000006373	POP1	100	49.761	Chrysemys_picta_bellii
ENSMAMG00000004040	pop1	82	36.965	ENSCING00000008323	-	89	36.965	Ciona_intestinalis
ENSMAMG00000004040	pop1	100	46.591	ENSCANG00000001647	POP1	100	46.408	Colobus_angolensis_palliatus
ENSMAMG00000004040	pop1	100	46.293	ENSCGRG00001017308	Pop1	100	47.031	Cricetulus_griseus_chok1gshd
ENSMAMG00000004040	pop1	100	43.671	ENSCGRG00000010824	Pop1	100	44.035	Cricetulus_griseus_crigri
ENSMAMG00000004040	pop1	100	73.360	ENSCSEG00000008737	POP1	100	73.966	Cynoglossus_semilaevis
ENSMAMG00000004040	pop1	100	70.838	ENSCVAG00000022248	pop1	100	71.140	Cyprinodon_variegatus
ENSMAMG00000004040	pop1	52	53.891	ENSDARG00000102087	pop1	98	53.891	Danio_rerio
ENSMAMG00000004040	pop1	100	44.786	ENSDNOG00000019974	POP1	100	44.434	Dasypus_novemcinctus
ENSMAMG00000004040	pop1	100	40.797	ENSDORG00000015384	Pop1	100	40.987	Dipodomys_ordii
ENSMAMG00000004040	pop1	88	46.325	ENSETEG00000007839	POP1	88	45.997	Echinops_telfairi
ENSMAMG00000004040	pop1	52	43.714	ENSEBUG00000009897	pop1	96	43.714	Eptatretus_burgeri
ENSMAMG00000004040	pop1	100	47.059	ENSEASG00005003189	POP1	98	47.193	Equus_asinus_asinus
ENSMAMG00000004040	pop1	100	47.059	ENSECAG00000024236	POP1	100	47.193	Equus_caballus
ENSMAMG00000004040	pop1	51	74.026	ENSEEUG00000003050	-	54	74.026	Erinaceus_europaeus
ENSMAMG00000004040	pop1	100	62.863	ENSELUG00000003526	pop1	100	63.463	Esox_lucius
ENSMAMG00000004040	pop1	100	47.805	ENSFCAG00000002168	POP1	100	47.483	Felis_catus
ENSMAMG00000004040	pop1	100	47.036	ENSFALG00000005711	POP1	100	47.143	Ficedula_albicollis
ENSMAMG00000004040	pop1	100	46.017	ENSFDAG00000017068	POP1	100	45.829	Fukomys_damarensis
ENSMAMG00000004040	pop1	100	71.645	ENSFHEG00000019518	pop1	100	71.645	Fundulus_heteroclitus
ENSMAMG00000004040	pop1	100	62.915	ENSGMOG00000000659	POP1	100	62.915	Gadus_morhua
ENSMAMG00000004040	pop1	100	70.528	ENSGAFG00000019770	POP1	100	70.528	Gambusia_affinis
ENSMAMG00000004040	pop1	100	68.571	ENSGACG00000003499	pop1	100	68.762	Gasterosteus_aculeatus
ENSMAMG00000004040	pop1	100	49.042	ENSGAGG00000011737	POP1	98	48.855	Gopherus_agassizii
ENSMAMG00000004040	pop1	100	46.837	ENSGGOG00000003176	POP1	100	47.214	Gorilla_gorilla
ENSMAMG00000004040	pop1	100	75.703	ENSHBUG00000021583	pop1	100	76.305	Haplochromis_burtoni
ENSMAMG00000004040	pop1	100	46.837	ENSHGLG00000006029	POP1	100	46.553	Heterocephalus_glaber_female
ENSMAMG00000004040	pop1	100	46.837	ENSHGLG00100016879	POP1	100	46.553	Heterocephalus_glaber_male
ENSMAMG00000004040	pop1	100	65.914	ENSHCOG00000013888	pop1	100	65.914	Hippocampus_comes
ENSMAMG00000004040	pop1	100	55.470	ENSIPUG00000018336	pop1	100	55.136	Ictalurus_punctatus
ENSMAMG00000004040	pop1	100	45.420	ENSSTOG00000011455	POP1	97	45.377	Ictidomys_tridecemlineatus
ENSMAMG00000004040	pop1	100	46.680	ENSJJAG00000013325	Pop1	100	46.394	Jaculus_jaculus
ENSMAMG00000004040	pop1	100	73.658	ENSKMAG00000001346	POP1	100	73.455	Kryptolebias_marmoratus
ENSMAMG00000004040	pop1	100	69.786	ENSLBEG00000024457	POP1	100	69.098	Labrus_bergylta
ENSMAMG00000004040	pop1	93	51.109	ENSLACG00000012498	POP1	99	51.055	Latimeria_chalumnae
ENSMAMG00000004040	pop1	100	55.545	ENSLOCG00000009817	POP1	100	55.642	Lepisosteus_oculatus
ENSMAMG00000004040	pop1	100	47.159	ENSLAFG00000010770	POP1	100	47.448	Loxodonta_africana
ENSMAMG00000004040	pop1	100	46.686	ENSMFAG00000000347	POP1	100	46.591	Macaca_fascicularis
ENSMAMG00000004040	pop1	100	46.780	ENSMNEG00000036870	POP1	100	46.686	Macaca_nemestrina
ENSMAMG00000004040	pop1	100	46.875	ENSMLEG00000034986	POP1	100	46.780	Mandrillus_leucophaeus
ENSMAMG00000004040	pop1	100	75.602	ENSMZEG00005025448	pop1	100	76.205	Maylandia_zebra
ENSMAMG00000004040	pop1	100	47.261	ENSMGAG00000012167	POP1	100	47.854	Meleagris_gallopavo
ENSMAMG00000004040	pop1	100	45.802	ENSMAUG00000017537	Pop1	100	45.646	Mesocricetus_auratus
ENSMAMG00000004040	pop1	100	46.385	ENSMICG00000004361	POP1	100	46.610	Microcebus_murinus
ENSMAMG00000004040	pop1	100	46.036	ENSMOCG00000006356	Pop1	100	45.869	Microtus_ochrogaster
ENSMAMG00000004040	pop1	100	68.154	ENSMMOG00000018242	pop1	100	67.882	Mola_mola
ENSMAMG00000004040	pop1	100	47.547	ENSMODG00000006561	POP1	100	47.358	Monodelphis_domestica
ENSMAMG00000004040	pop1	100	80.606	ENSMALG00000012621	POP1	100	80.707	Monopterus_albus
ENSMAMG00000004040	pop1	100	45.118	MGP_CAROLIEiJ_G0019726	Pop1	100	44.508	Mus_caroli
ENSMAMG00000004040	pop1	100	45.213	ENSMUSG00000022325	Pop1	100	44.697	Mus_musculus
ENSMAMG00000004040	pop1	100	45.472	MGP_PahariEiJ_G0019735	Pop1	100	45.507	Mus_pahari
ENSMAMG00000004040	pop1	100	45.057	MGP_SPRETEiJ_G0020622	Pop1	100	44.962	Mus_spretus
ENSMAMG00000004040	pop1	100	47.343	ENSMPUG00000015250	POP1	100	47.259	Mustela_putorius_furo
ENSMAMG00000004040	pop1	100	44.665	ENSMLUG00000010204	POP1	100	44.497	Myotis_lucifugus
ENSMAMG00000004040	pop1	100	46.931	ENSNGAG00000001582	Pop1	100	46.837	Nannospalax_galili
ENSMAMG00000004040	pop1	100	70.404	ENSNBRG00000002356	pop1	100	69.939	Neolamprologus_brichardi
ENSMAMG00000004040	pop1	100	47.633	ENSNLEG00000002541	POP1	100	47.633	Nomascus_leucogenys
ENSMAMG00000004040	pop1	87	54.651	ENSMEUG00000003118	POP1	90	53.779	Notamacropus_eugenii
ENSMAMG00000004040	pop1	100	46.654	ENSOPRG00000007667	POP1	100	46.654	Ochotona_princeps
ENSMAMG00000004040	pop1	100	46.730	ENSODEG00000003984	POP1	100	46.635	Octodon_degus
ENSMAMG00000004040	pop1	100	76.334	ENSONIG00000016445	pop1	100	76.838	Oreochromis_niloticus
ENSMAMG00000004040	pop1	60	46.443	ENSOANG00000001278	-	94	46.047	Ornithorhynchus_anatinus
ENSMAMG00000004040	pop1	100	45.634	ENSOCUG00000017400	POP1	100	45.480	Oryctolagus_cuniculus
ENSMAMG00000004040	pop1	100	72.599	ENSORLG00000002839	pop1	100	73.104	Oryzias_latipes
ENSMAMG00000004040	pop1	100	67.095	ENSORLG00020022450	POP1	100	66.831	Oryzias_latipes_hni
ENSMAMG00000004040	pop1	100	72.396	ENSORLG00015012746	POP1	100	73.003	Oryzias_latipes_hsok
ENSMAMG00000004040	pop1	100	70.010	ENSOMEG00000006915	pop1	99	70.618	Oryzias_melastigma
ENSMAMG00000004040	pop1	100	46.328	ENSOGAG00000001466	POP1	100	46.635	Otolemur_garnettii
ENSMAMG00000004040	pop1	100	47.309	ENSPPAG00000018410	POP1	100	47.309	Pan_paniscus
ENSMAMG00000004040	pop1	100	46.673	ENSPPRG00000005002	POP1	100	46.869	Panthera_pardus
ENSMAMG00000004040	pop1	100	47.433	ENSPTIG00000016527	POP1	100	47.114	Panthera_tigris_altaica
ENSMAMG00000004040	pop1	100	47.403	ENSPTRG00000020458	POP1	100	47.403	Pan_troglodytes
ENSMAMG00000004040	pop1	100	46.970	ENSPANG00000009704	POP1	100	46.875	Papio_anubis
ENSMAMG00000004040	pop1	100	58.250	ENSPKIG00000016325	POP1	100	58.350	Paramormyrops_kingsleyae
ENSMAMG00000004040	pop1	100	48.677	ENSPSIG00000012343	POP1	100	49.010	Pelodiscus_sinensis
ENSMAMG00000004040	pop1	100	63.297	ENSPMGG00000022253	POP1	100	63.127	Periophthalmus_magnuspinnatus
ENSMAMG00000004040	pop1	99	45.412	ENSPEMG00000023633	Pop1	100	45.974	Peromyscus_maniculatus_bairdii
ENSMAMG00000004040	pop1	91	42.573	ENSPMAG00000003209	POP1	99	42.902	Petromyzon_marinus
ENSMAMG00000004040	pop1	100	46.887	ENSPCIG00000012216	POP1	100	46.843	Phascolarctos_cinereus
ENSMAMG00000004040	pop1	100	69.028	ENSPFOG00000012490	POP1	100	69.534	Poecilia_formosa
ENSMAMG00000004040	pop1	100	69.028	ENSPLAG00000004646	POP1	100	69.534	Poecilia_latipinna
ENSMAMG00000004040	pop1	100	68.927	ENSPMEG00000019592	POP1	100	69.433	Poecilia_mexicana
ENSMAMG00000004040	pop1	100	69.161	ENSPREG00000020951	POP1	100	69.666	Poecilia_reticulata
ENSMAMG00000004040	pop1	100	46.937	ENSPPYG00000018777	POP1	100	46.937	Pongo_abelii
ENSMAMG00000004040	pop1	100	44.697	ENSPCAG00000016662	POP1	100	44.340	Procavia_capensis
ENSMAMG00000004040	pop1	100	46.408	ENSPCOG00000019420	POP1	100	46.408	Propithecus_coquereli
ENSMAMG00000004040	pop1	100	46.300	ENSPVAG00000014468	POP1	100	46.272	Pteropus_vampyrus
ENSMAMG00000004040	pop1	100	71.400	ENSPNYG00000004476	pop1	100	70.892	Pundamilia_nyererei
ENSMAMG00000004040	pop1	100	56.907	ENSPNAG00000000265	pop1	100	56.809	Pygocentrus_nattereri
ENSMAMG00000004040	pop1	100	45.342	ENSRNOG00000005243	Pop1	100	44.792	Rattus_norvegicus
ENSMAMG00000004040	pop1	100	46.875	ENSRBIG00000007996	POP1	100	46.875	Rhinopithecus_bieti
ENSMAMG00000004040	pop1	100	46.875	ENSRROG00000012334	POP1	100	46.648	Rhinopithecus_roxellana
ENSMAMG00000004040	pop1	99	46.991	ENSSBOG00000020830	POP1	100	46.425	Saimiri_boliviensis_boliviensis
ENSMAMG00000004040	pop1	100	47.588	ENSSHAG00000000296	POP1	100	47.304	Sarcophilus_harrisii
ENSMAMG00000004040	pop1	100	59.208	ENSSFOG00015007429	pop1	99	59.381	Scleropages_formosus
ENSMAMG00000004040	pop1	100	75.178	ENSSMAG00000010467	POP1	100	75.178	Scophthalmus_maximus
ENSMAMG00000004040	pop1	100	83.148	ENSSDUG00000007817	POP1	100	83.653	Seriola_dumerili
ENSMAMG00000004040	pop1	100	82.543	ENSSLDG00000012565	POP1	100	83.047	Seriola_lalandi_dorsalis
ENSMAMG00000004040	pop1	100	47.087	ENSSPUG00000003550	-	100	46.878	Sphenodon_punctatus
ENSMAMG00000004040	pop1	100	74.048	ENSSPAG00000014955	pop1	100	73.547	Stegastes_partitus
ENSMAMG00000004040	pop1	100	47.154	ENSSSCG00000006078	POP1	100	47.193	Sus_scrofa
ENSMAMG00000004040	pop1	93	45.455	ENSTGUG00000012011	-	100	45.558	Taeniopygia_guttata
ENSMAMG00000004040	pop1	100	69.138	ENSTRUG00000010856	pop1	100	69.728	Takifugu_rubripes
ENSMAMG00000004040	pop1	95	70.248	ENSTNIG00000013297	pop1	100	70.764	Tetraodon_nigroviridis
ENSMAMG00000004040	pop1	93	46.336	ENSTBEG00000014214	POP1	97	46.130	Tupaia_belangeri
ENSMAMG00000004040	pop1	100	46.750	ENSTTRG00000016071	POP1	100	46.293	Tursiops_truncatus
ENSMAMG00000004040	pop1	99	47.642	ENSUAMG00000017309	POP1	100	47.493	Ursus_americanus
ENSMAMG00000004040	pop1	100	46.168	ENSUMAG00000016952	POP1	100	49.624	Ursus_maritimus
ENSMAMG00000004040	pop1	86	50.714	ENSVPAG00000008278	POP1	82	51.079	Vicugna_pacos
ENSMAMG00000004040	pop1	100	46.293	ENSVVUG00000010994	POP1	100	46.103	Vulpes_vulpes
ENSMAMG00000004040	pop1	100	61.239	ENSXCOG00000017043	POP1	100	61.233	Xiphophorus_couchianus
ENSMAMG00000004040	pop1	100	69.363	ENSXMAG00000002472	POP1	100	69.363	Xiphophorus_maculatus