EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000004235 (Gene tree)
Gene ID: 113137507
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 9701 bases
Position: chrOOHQ01000069.1:17270284-17279984
Accession: 113137507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006245	Beta-Casp	PF10996.8	3.9e-21	1	1
ENSMAMP00000006245	Lactamase_B	PF00753.27	4.1e-05	1	1
ENSMAMP00000006245	RMMBL	PF07521.12	1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006421	-	5275	-	ENSMAMP00000006245	787 (aa)	XP_026175008	UPI000E457AF7

Gene Model

Click here to download ENSMAMG00000004235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004235	cpsf2	100	85.805	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSMAMG00000004235	cpsf2	100	96.569	ENSAPOG00000001242	cpsf2	100	96.569	Acanthochromis_polyacanthus
ENSMAMG00000004235	cpsf2	100	96.193	ENSACIG00000009331	cpsf2	100	96.193	Amphilophus_citrinellus
ENSMAMG00000004235	cpsf2	100	97.078	ENSAOCG00000014095	cpsf2	100	97.078	Amphiprion_ocellaris
ENSMAMG00000004235	cpsf2	100	97.078	ENSAPEG00000009158	cpsf2	100	97.078	Amphiprion_percula
ENSMAMG00000004235	cpsf2	96	97.098	ENSATEG00000017644	cpsf2	99	96.644	Anabas_testudineus
ENSMAMG00000004235	cpsf2	100	85.443	ENSAPLG00000006330	CPSF2	100	85.443	Anas_platyrhynchos
ENSMAMG00000004235	cpsf2	100	84.664	ENSACAG00000009245	CPSF2	100	84.664	Anolis_carolinensis
ENSMAMG00000004235	cpsf2	100	85.932	ENSANAG00000022915	CPSF2	100	85.932	Aotus_nancymaae
ENSMAMG00000004235	cpsf2	100	89.480	ENSAMXG00000018696	cpsf2	100	89.480	Astyanax_mexicanus
ENSMAMG00000004235	cpsf2	100	85.932	ENSBTAG00000010227	CPSF2	100	85.932	Bos_taurus
ENSMAMG00000004235	cpsf2	100	41.901	WBGene00017313	cpsf-2	100	41.784	Caenorhabditis_elegans
ENSMAMG00000004235	cpsf2	100	85.932	ENSCJAG00000018069	CPSF2	100	85.932	Callithrix_jacchus
ENSMAMG00000004235	cpsf2	100	85.932	ENSCAFG00000010909	CPSF2	100	85.932	Canis_familiaris
ENSMAMG00000004235	cpsf2	100	85.932	ENSCAFG00020020670	CPSF2	100	85.932	Canis_lupus_dingo
ENSMAMG00000004235	cpsf2	100	85.932	ENSCHIG00000023848	CPSF2	100	85.932	Capra_hircus
ENSMAMG00000004235	cpsf2	100	85.805	ENSTSYG00000009036	CPSF2	100	85.805	Carlito_syrichta
ENSMAMG00000004235	cpsf2	100	85.932	ENSCPOG00000010899	CPSF2	100	85.932	Cavia_porcellus
ENSMAMG00000004235	cpsf2	100	85.932	ENSCCAG00000028088	CPSF2	100	85.932	Cebus_capucinus
ENSMAMG00000004235	cpsf2	100	85.932	ENSCATG00000030132	CPSF2	100	85.932	Cercocebus_atys
ENSMAMG00000004235	cpsf2	100	86.058	ENSCLAG00000012404	CPSF2	100	86.058	Chinchilla_lanigera
ENSMAMG00000004235	cpsf2	100	85.932	ENSCSAG00000011300	CPSF2	100	85.932	Chlorocebus_sabaeus
ENSMAMG00000004235	cpsf2	100	80.355	ENSCHOG00000012904	CPSF2	100	80.355	Choloepus_hoffmanni
ENSMAMG00000004235	cpsf2	100	85.551	ENSCPBG00000008766	CPSF2	97	85.551	Chrysemys_picta_bellii
ENSMAMG00000004235	cpsf2	100	52.795	ENSCING00000007881	-	100	52.174	Ciona_intestinalis
ENSMAMG00000004235	cpsf2	94	85.946	ENSCANG00000041651	CPSF2	100	85.927	Colobus_angolensis_palliatus
ENSMAMG00000004235	cpsf2	100	85.425	ENSCGRG00001006901	Cpsf2	100	85.425	Cricetulus_griseus_chok1gshd
ENSMAMG00000004235	cpsf2	100	85.425	ENSCGRG00000012416	Cpsf2	100	85.425	Cricetulus_griseus_crigri
ENSMAMG00000004235	cpsf2	100	94.924	ENSCSEG00000004116	cpsf2	100	94.924	Cynoglossus_semilaevis
ENSMAMG00000004235	cpsf2	100	95.172	ENSCVAG00000000095	cpsf2	100	95.172	Cyprinodon_variegatus
ENSMAMG00000004235	cpsf2	100	87.722	ENSDARG00000028971	cpsf2	100	87.722	Danio_rerio
ENSMAMG00000004235	cpsf2	100	85.932	ENSDNOG00000042757	CPSF2	100	85.932	Dasypus_novemcinctus
ENSMAMG00000004235	cpsf2	100	85.932	ENSDORG00000013709	Cpsf2	100	85.932	Dipodomys_ordii
ENSMAMG00000004235	cpsf2	100	53.399	FBgn0027873	Cpsf100	100	53.036	Drosophila_melanogaster
ENSMAMG00000004235	cpsf2	100	78.354	ENSETEG00000012123	CPSF2	100	78.354	Echinops_telfairi
ENSMAMG00000004235	cpsf2	52	75.550	ENSEBUG00000012098	cpsf2	93	75.550	Eptatretus_burgeri
ENSMAMG00000004235	cpsf2	89	90.785	ENSEASG00005021193	CPSF2	100	90.785	Equus_asinus_asinus
ENSMAMG00000004235	cpsf2	100	85.805	ENSECAG00000023935	CPSF2	100	85.805	Equus_caballus
ENSMAMG00000004235	cpsf2	100	89.223	ENSELUG00000008442	cpsf2	100	89.223	Esox_lucius
ENSMAMG00000004235	cpsf2	100	85.805	ENSFCAG00000007886	CPSF2	100	85.805	Felis_catus
ENSMAMG00000004235	cpsf2	100	85.279	ENSFALG00000002412	CPSF2	100	85.279	Ficedula_albicollis
ENSMAMG00000004235	cpsf2	100	85.805	ENSFDAG00000006327	CPSF2	100	85.805	Fukomys_damarensis
ENSMAMG00000004235	cpsf2	96	92.670	ENSFHEG00000015465	cpsf2	98	93.578	Fundulus_heteroclitus
ENSMAMG00000004235	cpsf2	100	89.381	ENSGMOG00000008761	cpsf2	100	89.381	Gadus_morhua
ENSMAMG00000004235	cpsf2	100	86.041	ENSGALG00000010783	CPSF2	100	86.041	Gallus_gallus
ENSMAMG00000004235	cpsf2	100	95.426	ENSGAFG00000001407	cpsf2	100	95.426	Gambusia_affinis
ENSMAMG00000004235	cpsf2	100	95.680	ENSGACG00000008418	cpsf2	100	95.680	Gasterosteus_aculeatus
ENSMAMG00000004235	cpsf2	100	85.425	ENSGAGG00000008287	CPSF2	100	85.425	Gopherus_agassizii
ENSMAMG00000004235	cpsf2	100	85.805	ENSGGOG00000011799	CPSF2	100	85.805	Gorilla_gorilla
ENSMAMG00000004235	cpsf2	100	94.917	ENSHBUG00000023466	cpsf2	100	94.917	Haplochromis_burtoni
ENSMAMG00000004235	cpsf2	100	85.932	ENSHGLG00000018311	CPSF2	100	85.932	Heterocephalus_glaber_female
ENSMAMG00000004235	cpsf2	100	85.932	ENSHGLG00100016460	CPSF2	100	85.932	Heterocephalus_glaber_male
ENSMAMG00000004235	cpsf2	100	94.028	ENSHCOG00000019527	cpsf2	98	94.028	Hippocampus_comes
ENSMAMG00000004235	cpsf2	100	90.368	ENSIPUG00000020857	cpsf2	100	90.368	Ictalurus_punctatus
ENSMAMG00000004235	cpsf2	100	85.932	ENSSTOG00000009528	CPSF2	100	85.932	Ictidomys_tridecemlineatus
ENSMAMG00000004235	cpsf2	100	85.805	ENSJJAG00000017925	Cpsf2	100	85.805	Jaculus_jaculus
ENSMAMG00000004235	cpsf2	100	94.663	ENSKMAG00000019429	cpsf2	100	94.663	Kryptolebias_marmoratus
ENSMAMG00000004235	cpsf2	95	94.638	ENSLBEG00000011585	cpsf2	100	94.638	Labrus_bergylta
ENSMAMG00000004235	cpsf2	100	84.137	ENSLACG00000019024	CPSF2	100	84.537	Latimeria_chalumnae
ENSMAMG00000004235	cpsf2	100	89.367	ENSLOCG00000014102	cpsf2	100	89.367	Lepisosteus_oculatus
ENSMAMG00000004235	cpsf2	100	85.588	ENSLAFG00000004891	CPSF2	100	85.588	Loxodonta_africana
ENSMAMG00000004235	cpsf2	100	85.932	ENSMFAG00000041212	CPSF2	100	85.932	Macaca_fascicularis
ENSMAMG00000004235	cpsf2	100	85.932	ENSMMUG00000000699	CPSF2	100	85.932	Macaca_mulatta
ENSMAMG00000004235	cpsf2	100	85.932	ENSMNEG00000031584	CPSF2	100	85.932	Macaca_nemestrina
ENSMAMG00000004235	cpsf2	100	85.932	ENSMLEG00000029394	CPSF2	100	85.932	Mandrillus_leucophaeus
ENSMAMG00000004235	cpsf2	100	95.044	ENSMZEG00005001769	cpsf2	100	95.044	Maylandia_zebra
ENSMAMG00000004235	cpsf2	100	85.805	ENSMGAG00000013122	CPSF2	100	85.805	Meleagris_gallopavo
ENSMAMG00000004235	cpsf2	100	85.298	ENSMAUG00000015160	Cpsf2	100	85.298	Mesocricetus_auratus
ENSMAMG00000004235	cpsf2	100	85.932	ENSMICG00000016441	CPSF2	100	85.932	Microcebus_murinus
ENSMAMG00000004235	cpsf2	100	85.425	ENSMOCG00000015372	Cpsf2	100	85.425	Microtus_ochrogaster
ENSMAMG00000004235	cpsf2	100	90.470	ENSMMOG00000015590	cpsf2	100	90.470	Mola_mola
ENSMAMG00000004235	cpsf2	100	85.932	ENSMODG00000002042	CPSF2	100	85.932	Monodelphis_domestica
ENSMAMG00000004235	cpsf2	100	93.011	ENSMALG00000022275	cpsf2	100	93.011	Monopterus_albus
ENSMAMG00000004235	cpsf2	100	85.425	ENSMUSG00000041781	Cpsf2	100	85.425	Mus_musculus
ENSMAMG00000004235	cpsf2	100	85.298	MGP_PahariEiJ_G0029791	Cpsf2	100	85.298	Mus_pahari
ENSMAMG00000004235	cpsf2	100	85.425	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.425	Mus_spretus
ENSMAMG00000004235	cpsf2	100	85.805	ENSMPUG00000007617	CPSF2	98	85.805	Mustela_putorius_furo
ENSMAMG00000004235	cpsf2	100	85.551	ENSMLUG00000005570	CPSF2	100	85.551	Myotis_lucifugus
ENSMAMG00000004235	cpsf2	100	85.805	ENSNGAG00000020312	Cpsf2	100	85.805	Nannospalax_galili
ENSMAMG00000004235	cpsf2	100	95.299	ENSNBRG00000022402	cpsf2	100	95.299	Neolamprologus_brichardi
ENSMAMG00000004235	cpsf2	100	85.044	ENSNLEG00000017132	CPSF2	100	85.044	Nomascus_leucogenys
ENSMAMG00000004235	cpsf2	91	93.528	ENSMEUG00000008138	CPSF2	91	93.528	Notamacropus_eugenii
ENSMAMG00000004235	cpsf2	94	81.436	ENSOPRG00000008484	-	100	81.436	Ochotona_princeps
ENSMAMG00000004235	cpsf2	100	85.678	ENSODEG00000008682	CPSF2	100	85.678	Octodon_degus
ENSMAMG00000004235	cpsf2	100	95.299	ENSONIG00000005901	cpsf2	100	95.299	Oreochromis_niloticus
ENSMAMG00000004235	cpsf2	100	85.805	ENSOANG00000003822	CPSF2	100	85.805	Ornithorhynchus_anatinus
ENSMAMG00000004235	cpsf2	100	85.805	ENSOCUG00000005713	CPSF2	100	85.805	Oryctolagus_cuniculus
ENSMAMG00000004235	cpsf2	100	88.691	ENSORLG00000011628	cpsf2	100	88.691	Oryzias_latipes
ENSMAMG00000004235	cpsf2	100	94.536	ENSORLG00020016980	cpsf2	100	94.536	Oryzias_latipes_hni
ENSMAMG00000004235	cpsf2	100	94.536	ENSORLG00015011910	cpsf2	100	94.536	Oryzias_latipes_hsok
ENSMAMG00000004235	cpsf2	100	94.162	ENSOMEG00000022876	cpsf2	100	94.162	Oryzias_melastigma
ENSMAMG00000004235	cpsf2	100	82.933	ENSOARG00000012889	CPSF2	100	82.933	Ovis_aries
ENSMAMG00000004235	cpsf2	100	85.805	ENSPPAG00000039666	CPSF2	100	85.805	Pan_paniscus
ENSMAMG00000004235	cpsf2	99	85.787	ENSPPRG00000010869	CPSF2	100	85.787	Panthera_pardus
ENSMAMG00000004235	cpsf2	100	85.805	ENSPTIG00000021202	CPSF2	100	85.805	Panthera_tigris_altaica
ENSMAMG00000004235	cpsf2	100	85.805	ENSPTRG00000006651	CPSF2	100	85.805	Pan_troglodytes
ENSMAMG00000004235	cpsf2	100	85.932	ENSPANG00000017417	CPSF2	100	85.932	Papio_anubis
ENSMAMG00000004235	cpsf2	100	84.664	ENSPKIG00000021453	cpsf2	100	84.664	Paramormyrops_kingsleyae
ENSMAMG00000004235	cpsf2	100	85.171	ENSPSIG00000006289	CPSF2	100	85.171	Pelodiscus_sinensis
ENSMAMG00000004235	cpsf2	76	88.020	ENSPMGG00000002511	cpsf2	99	89.167	Periophthalmus_magnuspinnatus
ENSMAMG00000004235	cpsf2	100	85.551	ENSPEMG00000007917	Cpsf2	100	85.551	Peromyscus_maniculatus_bairdii
ENSMAMG00000004235	cpsf2	100	72.898	ENSPMAG00000006205	cpsf2	100	73.159	Petromyzon_marinus
ENSMAMG00000004235	cpsf2	100	85.932	ENSPCIG00000011393	CPSF2	100	85.932	Phascolarctos_cinereus
ENSMAMG00000004235	cpsf2	100	95.426	ENSPFOG00000018648	cpsf2	100	95.426	Poecilia_formosa
ENSMAMG00000004235	cpsf2	100	95.426	ENSPLAG00000019199	cpsf2	99	95.426	Poecilia_latipinna
ENSMAMG00000004235	cpsf2	96	95.383	ENSPMEG00000012100	cpsf2	100	95.174	Poecilia_mexicana
ENSMAMG00000004235	cpsf2	100	95.044	ENSPREG00000008960	cpsf2	100	95.044	Poecilia_reticulata
ENSMAMG00000004235	cpsf2	64	81.710	ENSPPYG00000029685	-	100	81.710	Pongo_abelii
ENSMAMG00000004235	cpsf2	100	85.678	ENSPCAG00000012477	CPSF2	100	85.678	Procavia_capensis
ENSMAMG00000004235	cpsf2	100	85.805	ENSPCOG00000026387	CPSF2	100	85.805	Propithecus_coquereli
ENSMAMG00000004235	cpsf2	64	90.816	ENSPVAG00000004223	CPSF2	65	90.816	Pteropus_vampyrus
ENSMAMG00000004235	cpsf2	100	94.797	ENSPNYG00000023356	cpsf2	100	94.797	Pundamilia_nyererei
ENSMAMG00000004235	cpsf2	100	90.748	ENSPNAG00000001849	cpsf2	100	90.748	Pygocentrus_nattereri
ENSMAMG00000004235	cpsf2	100	85.551	ENSRNOG00000005733	Cpsf2	100	85.551	Rattus_norvegicus
ENSMAMG00000004235	cpsf2	100	85.932	ENSRBIG00000044792	CPSF2	100	85.932	Rhinopithecus_bieti
ENSMAMG00000004235	cpsf2	100	85.932	ENSRROG00000034875	CPSF2	100	85.932	Rhinopithecus_roxellana
ENSMAMG00000004235	cpsf2	100	85.932	ENSSBOG00000024571	CPSF2	100	85.932	Saimiri_boliviensis_boliviensis
ENSMAMG00000004235	cpsf2	100	85.932	ENSSHAG00000010458	CPSF2	100	85.932	Sarcophilus_harrisii
ENSMAMG00000004235	cpsf2	100	91.635	ENSSFOG00015002117	cpsf2	100	91.762	Scleropages_formosus
ENSMAMG00000004235	cpsf2	100	94.289	ENSSMAG00000002001	cpsf2	100	95.051	Scophthalmus_maximus
ENSMAMG00000004235	cpsf2	100	97.840	ENSSDUG00000004084	cpsf2	100	97.840	Seriola_dumerili
ENSMAMG00000004235	cpsf2	100	97.205	ENSSLDG00000024330	cpsf2	100	97.205	Seriola_lalandi_dorsalis
ENSMAMG00000004235	cpsf2	58	95.050	ENSSARG00000009784	-	63	95.050	Sorex_araneus
ENSMAMG00000004235	cpsf2	100	85.425	ENSSPUG00000013485	CPSF2	100	85.425	Sphenodon_punctatus
ENSMAMG00000004235	cpsf2	100	96.696	ENSSPAG00000013284	cpsf2	100	96.696	Stegastes_partitus
ENSMAMG00000004235	cpsf2	100	85.678	ENSSSCG00000002447	CPSF2	100	85.678	Sus_scrofa
ENSMAMG00000004235	cpsf2	100	85.406	ENSTGUG00000012571	-	100	85.406	Taeniopygia_guttata
ENSMAMG00000004235	cpsf2	100	94.155	ENSTRUG00000003742	cpsf2	100	94.155	Takifugu_rubripes
ENSMAMG00000004235	cpsf2	100	92.649	ENSTNIG00000012228	cpsf2	100	93.663	Tetraodon_nigroviridis
ENSMAMG00000004235	cpsf2	91	83.333	ENSTBEG00000004530	CPSF2	94	83.333	Tupaia_belangeri
ENSMAMG00000004235	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSMAMG00000004235	cpsf2	100	85.932	ENSUAMG00000028071	CPSF2	100	85.932	Ursus_americanus
ENSMAMG00000004235	cpsf2	100	85.932	ENSUMAG00000005029	CPSF2	100	85.932	Ursus_maritimus
ENSMAMG00000004235	cpsf2	99	85.787	ENSVPAG00000003503	CPSF2	100	85.787	Vicugna_pacos
ENSMAMG00000004235	cpsf2	100	85.932	ENSVVUG00000024642	CPSF2	100	85.932	Vulpes_vulpes
ENSMAMG00000004235	cpsf2	100	84.284	ENSXETG00000010289	cpsf2	100	84.284	Xenopus_tropicalis
ENSMAMG00000004235	cpsf2	100	95.172	ENSXCOG00000001764	cpsf2	100	95.172	Xiphophorus_couchianus
ENSMAMG00000004235	cpsf2	100	95.680	ENSXMAG00000017048	cpsf2	100	95.680	Xiphophorus_maculatus