EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000004280 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 50032 bases
Position: chrOOHQ01000039.1:18813785-18863816
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006299	SRRM_C	PF15230.6	1.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006475	-	1224	-	ENSMAMP00000006299	407 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000004280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004280	srrm4	99	63.318	ENSACIG00000002171	srrm4	95	67.757	Amphilophus_citrinellus
ENSMAMG00000004280	srrm4	99	71.223	ENSATEG00000005330	srrm4	99	71.635	Anabas_testudineus
ENSMAMG00000004280	srrm4	98	66.741	ENSACLG00000023532	srrm4	98	68.514	Astatotilapia_calliptera
ENSMAMG00000004280	srrm4	75	64.881	ENSFHEG00000005091	srrm4	86	66.964	Fundulus_heteroclitus
ENSMAMG00000004280	srrm4	80	90.000	ENSGAFG00000006706	srrm4	99	58.280	Gambusia_affinis
ENSMAMG00000004280	srrm4	98	66.741	ENSMZEG00005021733	srrm4	98	68.514	Maylandia_zebra
ENSMAMG00000004280	srrm4	98	64.444	ENSMMOG00000000228	srrm4	99	64.450	Mola_mola
ENSMAMG00000004280	srrm4	90	69.527	ENSNBRG00000015313	srrm4	98	66.525	Neolamprologus_brichardi
ENSMAMG00000004280	srrm4	74	63.764	ENSONIG00000010552	srrm4	71	65.352	Oreochromis_niloticus
ENSMAMG00000004280	srrm4	98	55.711	ENSPMGG00000008387	srrm4	96	56.308	Periophthalmus_magnuspinnatus
ENSMAMG00000004280	srrm4	98	63.616	ENSPREG00000004567	srrm4	99	63.844	Poecilia_reticulata
ENSMAMG00000004280	srrm4	98	62.108	ENSPNYG00000007785	srrm4	98	63.901	Pundamilia_nyererei
ENSMAMG00000004280	srrm4	98	62.754	ENSSMAG00000012257	srrm4	99	65.237	Scophthalmus_maximus
ENSMAMG00000004280	srrm4	99	71.588	ENSSDUG00000017519	srrm4	99	71.588	Seriola_dumerili
ENSMAMG00000004280	srrm4	100	69.231	ENSSLDG00000015130	srrm4	99	70.110	Seriola_lalandi_dorsalis
ENSMAMG00000004280	srrm4	99	66.385	ENSSPAG00000016190	srrm4	99	70.958	Stegastes_partitus