EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000004348 (Gene tree)
Gene ID: 113126179
Gene Symbol: thrap3b
Alias: zgc:85716
Full Name: thyroid hormone receptor associated protein 3b
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8013 bases
Position: chrOOHQ01000103.1:17076420-17084432
Accession: ZDB-GENE-040516-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006455	THRAP3_BCLAF1	PF15440.6	3e-77	1	2
ENSMAMP00000006455	THRAP3_BCLAF1	PF15440.6	3e-77	2	2
ENSMAMP00000006433	THRAP3_BCLAF1	PF15440.6	2.6e-70	1	2
ENSMAMP00000006433	THRAP3_BCLAF1	PF15440.6	2.6e-70	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006638	-	2481	-	ENSMAMP00000006455	826 (aa)	-	-
ENSMAMT00000006615	-	2571	-	ENSMAMP00000006433	856 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000004348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000004348	thrap3b	77	53.968	ENSMAMG00000007707	thrap3a	95	52.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004348	thrap3b	93	36.216	ENSAPOG00000024453	thrap3a	51	61.111	Acanthochromis_polyacanthus
ENSMAMG00000004348	thrap3b	93	78.110	ENSAPOG00000001848	thrap3b	94	78.110	Acanthochromis_polyacanthus
ENSMAMG00000004348	thrap3b	66	34.591	ENSACIG00000018110	thrap3a	63	60.417	Amphilophus_citrinellus
ENSMAMG00000004348	thrap3b	78	71.795	ENSACIG00000015331	thrap3b	93	74.043	Amphilophus_citrinellus
ENSMAMG00000004348	thrap3b	80	52.518	ENSAOCG00000014738	thrap3a	63	54.545	Amphiprion_ocellaris
ENSMAMG00000004348	thrap3b	93	78.359	ENSAOCG00000015572	thrap3b	93	78.256	Amphiprion_ocellaris
ENSMAMG00000004348	thrap3b	93	78.878	ENSAPEG00000021862	thrap3b	93	78.777	Amphiprion_percula
ENSMAMG00000004348	thrap3b	80	51.799	ENSAPEG00000005696	thrap3a	63	53.719	Amphiprion_percula
ENSMAMG00000004348	thrap3b	100	75.134	ENSATEG00000006350	thrap3b	100	73.507	Anabas_testudineus
ENSMAMG00000004348	thrap3b	93	71.930	ENSACLG00000004763	thrap3b	94	72.398	Astatotilapia_calliptera
ENSMAMG00000004348	thrap3b	93	45.215	ENSAMXG00000020877	thrap3b	96	46.034	Astyanax_mexicanus
ENSMAMG00000004348	thrap3b	93	66.507	ENSCSEG00000010392	thrap3b	93	66.907	Cynoglossus_semilaevis
ENSMAMG00000004348	thrap3b	94	69.421	ENSCVAG00000001547	thrap3b	94	67.853	Cyprinodon_variegatus
ENSMAMG00000004348	thrap3b	73	42.900	ENSCVAG00000017634	thrap3a	57	38.710	Cyprinodon_variegatus
ENSMAMG00000004348	thrap3b	90	47.148	ENSDARG00000098228	thrap3b	99	54.114	Danio_rerio
ENSMAMG00000004348	thrap3b	91	33.008	ENSDARG00000101989	thrap3a	50	51.786	Danio_rerio
ENSMAMG00000004348	thrap3b	94	39.611	ENSELUG00000017733	thrap3a	85	67.692	Esox_lucius
ENSMAMG00000004348	thrap3b	93	55.493	ENSELUG00000007499	thrap3b	93	53.966	Esox_lucius
ENSMAMG00000004348	thrap3b	93	68.047	ENSFHEG00000001051	thrap3b	93	64.608	Fundulus_heteroclitus
ENSMAMG00000004348	thrap3b	52	61.795	ENSGAFG00000007090	thrap3b	83	60.752	Gambusia_affinis
ENSMAMG00000004348	thrap3b	93	60.179	ENSGACG00000002319	thrap3b	94	61.384	Gasterosteus_aculeatus
ENSMAMG00000004348	thrap3b	81	45.231	ENSGACG00000013745	thrap3a	54	42.982	Gasterosteus_aculeatus
ENSMAMG00000004348	thrap3b	93	71.156	ENSHBUG00000001708	thrap3b	94	71.395	Haplochromis_burtoni
ENSMAMG00000004348	thrap3b	97	63.337	ENSHCOG00000004098	thrap3b	99	60.335	Hippocampus_comes
ENSMAMG00000004348	thrap3b	93	33.654	ENSIPUG00000015339	thrap3a	59	52.027	Ictalurus_punctatus
ENSMAMG00000004348	thrap3b	93	45.759	ENSIPUG00000005707	thrap3b	92	51.282	Ictalurus_punctatus
ENSMAMG00000004348	thrap3b	94	70.561	ENSKMAG00000012105	thrap3b	94	69.176	Kryptolebias_marmoratus
ENSMAMG00000004348	thrap3b	82	55.462	ENSLBEG00000008813	thrap3a	85	63.964	Labrus_bergylta
ENSMAMG00000004348	thrap3b	93	72.500	ENSLBEG00000017803	thrap3b	94	72.857	Labrus_bergylta
ENSMAMG00000004348	thrap3b	66	32.227	ENSLOCG00000016208	BCLAF1	67	30.851	Lepisosteus_oculatus
ENSMAMG00000004348	thrap3b	93	72.131	ENSMZEG00005026309	thrap3b	94	72.600	Maylandia_zebra
ENSMAMG00000004348	thrap3b	77	53.782	ENSMMOG00000018587	thrap3a	62	57.000	Mola_mola
ENSMAMG00000004348	thrap3b	100	77.044	ENSMALG00000012582	thrap3b	100	71.222	Monopterus_albus
ENSMAMG00000004348	thrap3b	83	52.941	ENSMALG00000011980	thrap3a	64	55.238	Monopterus_albus
ENSMAMG00000004348	thrap3b	93	68.042	ENSNBRG00000014237	thrap3b	98	70.292	Neolamprologus_brichardi
ENSMAMG00000004348	thrap3b	93	67.793	ENSONIG00000013673	thrap3b	94	70.375	Oreochromis_niloticus
ENSMAMG00000004348	thrap3b	93	66.588	ENSORLG00000009543	thrap3b	94	66.470	Oryzias_latipes
ENSMAMG00000004348	thrap3b	93	66.509	ENSORLG00020016319	thrap3b	94	66.392	Oryzias_latipes_hni
ENSMAMG00000004348	thrap3b	93	66.352	ENSORLG00015007831	thrap3b	94	66.234	Oryzias_latipes_hsok
ENSMAMG00000004348	thrap3b	91	68.894	ENSOMEG00000005716	thrap3b	94	67.929	Oryzias_melastigma
ENSMAMG00000004348	thrap3b	66	40.833	ENSPKIG00000003697	thrap3b	86	37.516	Paramormyrops_kingsleyae
ENSMAMG00000004348	thrap3b	73	46.154	ENSPKIG00000005150	thrap3a	97	44.624	Paramormyrops_kingsleyae
ENSMAMG00000004348	thrap3b	77	64.304	ENSPMGG00000023429	thrap3b	84	88.710	Periophthalmus_magnuspinnatus
ENSMAMG00000004348	thrap3b	93	67.734	ENSPFOG00000000525	thrap3b	94	65.993	Poecilia_formosa
ENSMAMG00000004348	thrap3b	93	67.734	ENSPLAG00000016521	thrap3b	94	65.993	Poecilia_latipinna
ENSMAMG00000004348	thrap3b	93	67.933	ENSPMEG00000009021	thrap3b	94	66.071	Poecilia_mexicana
ENSMAMG00000004348	thrap3b	89	33.373	ENSPREG00000005816	thrap3a	61	35.965	Poecilia_reticulata
ENSMAMG00000004348	thrap3b	86	74.731	ENSPREG00000009927	thrap3b	94	65.922	Poecilia_reticulata
ENSMAMG00000004348	thrap3b	93	67.104	ENSPNYG00000003062	thrap3b	93	67.778	Pundamilia_nyererei
ENSMAMG00000004348	thrap3b	95	36.508	ENSPNAG00000015136	thrap3a	70	40.992	Pygocentrus_nattereri
ENSMAMG00000004348	thrap3b	93	45.516	ENSPNAG00000028762	thrap3b	94	46.871	Pygocentrus_nattereri
ENSMAMG00000004348	thrap3b	77	40.777	ENSSFOG00015002576	-	55	39.130	Scleropages_formosus
ENSMAMG00000004348	thrap3b	84	53.368	ENSSFOG00015020057	thrap3	94	44.064	Scleropages_formosus
ENSMAMG00000004348	thrap3b	93	73.944	ENSSMAG00000001259	thrap3b	94	74.883	Scophthalmus_maximus
ENSMAMG00000004348	thrap3b	93	36.606	ENSSDUG00000010132	thrap3a	81	59.322	Seriola_dumerili
ENSMAMG00000004348	thrap3b	93	77.988	ENSSDUG00000007054	thrap3b	94	77.988	Seriola_dumerili
ENSMAMG00000004348	thrap3b	93	36.859	ENSSLDG00000003306	thrap3a	79	52.174	Seriola_lalandi_dorsalis
ENSMAMG00000004348	thrap3b	93	77.830	ENSSLDG00000009210	thrap3b	94	77.830	Seriola_lalandi_dorsalis
ENSMAMG00000004348	thrap3b	61	76.690	ENSSPAG00000009248	thrap3b	99	76.868	Stegastes_partitus
ENSMAMG00000004348	thrap3b	80	50.685	ENSSPAG00000017651	thrap3a	75	62.745	Stegastes_partitus
ENSMAMG00000004348	thrap3b	99	57.650	ENSTRUG00000010336	thrap3b	93	61.401	Takifugu_rubripes
ENSMAMG00000004348	thrap3b	90	34.404	ENSTRUG00000010702	thrap3a	50	57.895	Takifugu_rubripes
ENSMAMG00000004348	thrap3b	73	51.807	ENSTNIG00000012194	thrap3a	54	51.807	Tetraodon_nigroviridis
ENSMAMG00000004348	thrap3b	92	66.016	ENSTNIG00000004582	thrap3b	93	55.254	Tetraodon_nigroviridis
ENSMAMG00000004348	thrap3b	78	72.321	ENSXCOG00000018772	thrap3b	91	61.074	Xiphophorus_couchianus
ENSMAMG00000004348	thrap3b	76	42.857	ENSXCOG00000001569	thrap3a	64	35.776	Xiphophorus_couchianus
ENSMAMG00000004348	thrap3b	93	67.099	ENSXMAG00000017962	thrap3b	94	66.194	Xiphophorus_maculatus