EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000004427 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4945 bases
Position: chrOOHQ01000103.1:17098021-17102965
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006492	LSM	PF01423.22	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006675	-	369	-	ENSMAMP00000006492	122 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000004427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000004427	oscp1a	61	32.432	ENSMAMG00000012971	snrpd1	82	30.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004427	oscp1a	99	64.463	ENSG00000181817	LSM10	98	64.463	Homo_sapiens
ENSMAMG00000004427	oscp1a	98	65.833	ENSAMEG00000019854	LSM10	98	65.833	Ailuropoda_melanoleuca
ENSMAMG00000004427	oscp1a	99	84.298	ENSACIG00000015420	oscp1a	80	84.298	Amphilophus_citrinellus
ENSMAMG00000004427	oscp1a	91	81.982	ENSAOCG00000015607	LSM10	86	81.982	Amphiprion_ocellaris
ENSMAMG00000004427	oscp1a	98	85.000	ENSAOCG00000014654	-	99	85.000	Amphiprion_ocellaris
ENSMAMG00000004427	oscp1a	98	85.000	ENSAOCG00000015618	LSM10	99	85.000	Amphiprion_ocellaris
ENSMAMG00000004427	oscp1a	91	81.982	ENSAPEG00000021851	LSM10	86	81.982	Amphiprion_percula
ENSMAMG00000004427	oscp1a	98	85.000	ENSAPEG00000021845	-	99	85.000	Amphiprion_percula
ENSMAMG00000004427	oscp1a	95	90.517	ENSATEG00000006310	oscp1a	86	90.517	Anabas_testudineus
ENSMAMG00000004427	oscp1a	96	59.829	ENSACAG00000001231	LSM10	95	59.829	Anolis_carolinensis
ENSMAMG00000004427	oscp1a	100	63.115	ENSANAG00000031489	-	100	63.115	Aotus_nancymaae
ENSMAMG00000004427	oscp1a	99	65.289	ENSANAG00000018759	-	98	65.289	Aotus_nancymaae
ENSMAMG00000004427	oscp1a	98	84.167	ENSACLG00000004728	oscp1a	98	84.167	Astatotilapia_calliptera
ENSMAMG00000004427	oscp1a	96	72.650	ENSAMXG00000025301	oscp1a	97	72.650	Astyanax_mexicanus
ENSMAMG00000004427	oscp1a	100	63.115	ENSBTAG00000024096	LSM10	100	63.115	Bos_taurus
ENSMAMG00000004427	oscp1a	99	66.116	ENSCJAG00000044880	LSM10	98	66.116	Callithrix_jacchus
ENSMAMG00000004427	oscp1a	98	65.833	ENSCAFG00000003382	LSM10	98	65.833	Canis_familiaris
ENSMAMG00000004427	oscp1a	98	65.833	ENSCAFG00020008920	LSM10	98	65.833	Canis_lupus_dingo
ENSMAMG00000004427	oscp1a	100	63.115	ENSCHIG00000009398	LSM10	100	63.115	Capra_hircus
ENSMAMG00000004427	oscp1a	98	65.833	ENSCAPG00000012567	LSM10	98	65.833	Cavia_aperea
ENSMAMG00000004427	oscp1a	98	65.833	ENSCPOG00000039302	LSM10	98	65.833	Cavia_porcellus
ENSMAMG00000004427	oscp1a	100	62.295	ENSCCAG00000008378	-	99	62.295	Cebus_capucinus
ENSMAMG00000004427	oscp1a	99	65.289	ENSCCAG00000018913	-	98	65.289	Cebus_capucinus
ENSMAMG00000004427	oscp1a	99	63.636	ENSCATG00000006589	LSM10	98	63.636	Cercocebus_atys
ENSMAMG00000004427	oscp1a	98	65.833	ENSCLAG00000008633	LSM10	98	65.833	Chinchilla_lanigera
ENSMAMG00000004427	oscp1a	99	63.636	ENSCSAG00000000134	LSM10	98	63.636	Chlorocebus_sabaeus
ENSMAMG00000004427	oscp1a	100	62.295	ENSCHOG00000008615	LSM10	98	62.295	Choloepus_hoffmanni
ENSMAMG00000004427	oscp1a	81	32.323	ENSCSAVG00000001896	-	85	32.323	Ciona_savignyi
ENSMAMG00000004427	oscp1a	99	63.636	ENSCANG00000019928	LSM10	98	63.636	Colobus_angolensis_palliatus
ENSMAMG00000004427	oscp1a	93	59.483	ENSCGRG00001022673	-	93	59.483	Cricetulus_griseus_chok1gshd
ENSMAMG00000004427	oscp1a	98	64.167	ENSCGRG00001004317	-	98	64.167	Cricetulus_griseus_chok1gshd
ENSMAMG00000004427	oscp1a	98	64.167	ENSCGRG00000014935	-	98	64.167	Cricetulus_griseus_crigri
ENSMAMG00000004427	oscp1a	93	59.483	ENSCGRG00000015514	-	93	59.483	Cricetulus_griseus_crigri
ENSMAMG00000004427	oscp1a	98	82.353	ENSCSEG00000010374	oscp1a	80	82.353	Cynoglossus_semilaevis
ENSMAMG00000004427	oscp1a	98	80.000	ENSCVAG00000001536	oscp1a	91	80.000	Cyprinodon_variegatus
ENSMAMG00000004427	oscp1a	70	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSMAMG00000004427	oscp1a	98	73.333	ENSDARG00000101222	oscp1a	99	73.333	Danio_rerio
ENSMAMG00000004427	oscp1a	99	65.289	ENSDNOG00000036662	LSM10	98	65.289	Dasypus_novemcinctus
ENSMAMG00000004427	oscp1a	98	65.000	ENSDORG00000007579	Lsm10	98	65.000	Dipodomys_ordii
ENSMAMG00000004427	oscp1a	100	64.228	ENSETEG00000005703	LSM10	100	64.228	Echinops_telfairi
ENSMAMG00000004427	oscp1a	96	48.718	ENSEBUG00000001312	oscp1a	96	48.718	Eptatretus_burgeri
ENSMAMG00000004427	oscp1a	98	65.000	ENSEASG00005012194	LSM10	98	65.000	Equus_asinus_asinus
ENSMAMG00000004427	oscp1a	98	65.000	ENSECAG00000005071	LSM10	98	65.000	Equus_caballus
ENSMAMG00000004427	oscp1a	98	65.833	ENSEEUG00000012032	LSM10	98	65.833	Erinaceus_europaeus
ENSMAMG00000004427	oscp1a	98	82.500	ENSELUG00000007452	oscp1a	98	82.500	Esox_lucius
ENSMAMG00000004427	oscp1a	96	62.393	ENSFALG00000000851	LSM10	95	62.393	Ficedula_albicollis
ENSMAMG00000004427	oscp1a	98	66.667	ENSFDAG00000021056	LSM10	98	66.667	Fukomys_damarensis
ENSMAMG00000004427	oscp1a	93	74.561	ENSFHEG00000001058	oscp1a	98	74.561	Fundulus_heteroclitus
ENSMAMG00000004427	oscp1a	95	65.517	ENSGMOG00000019832	oscp1a	97	65.517	Gadus_morhua
ENSMAMG00000004427	oscp1a	98	64.706	ENSGALG00000002127	LSM10	97	64.706	Gallus_gallus
ENSMAMG00000004427	oscp1a	88	68.224	ENSGAFG00000016445	oscp1a	87	68.224	Gambusia_affinis
ENSMAMG00000004427	oscp1a	98	88.333	ENSGACG00000002329	oscp1a	98	88.333	Gasterosteus_aculeatus
ENSMAMG00000004427	oscp1a	97	64.407	ENSGAGG00000024848	LSM10	96	64.407	Gopherus_agassizii
ENSMAMG00000004427	oscp1a	99	64.463	ENSGGOG00000003556	LSM10	98	64.463	Gorilla_gorilla
ENSMAMG00000004427	oscp1a	98	85.000	ENSHBUG00000001722	oscp1a	98	85.000	Haplochromis_burtoni
ENSMAMG00000004427	oscp1a	98	64.167	ENSHGLG00000011625	LSM10	98	64.167	Heterocephalus_glaber_female
ENSMAMG00000004427	oscp1a	98	64.167	ENSHGLG00100001769	LSM10	98	64.167	Heterocephalus_glaber_male
ENSMAMG00000004427	oscp1a	87	70.755	ENSIPUG00000005808	oscp1a	92	70.755	Ictalurus_punctatus
ENSMAMG00000004427	oscp1a	98	65.833	ENSSTOG00000000606	LSM10	98	65.833	Ictidomys_tridecemlineatus
ENSMAMG00000004427	oscp1a	98	84.167	ENSKMAG00000012143	oscp1a	99	84.167	Kryptolebias_marmoratus
ENSMAMG00000004427	oscp1a	100	77.869	ENSLBEG00000017764	oscp1a	100	77.869	Labrus_bergylta
ENSMAMG00000004427	oscp1a	97	61.864	ENSLACG00000015904	LSM10	91	61.864	Latimeria_chalumnae
ENSMAMG00000004427	oscp1a	100	72.951	ENSLOCG00000018277	oscp1a	100	72.951	Lepisosteus_oculatus
ENSMAMG00000004427	oscp1a	99	63.636	ENSLAFG00000009600	LSM10	98	63.636	Loxodonta_africana
ENSMAMG00000004427	oscp1a	99	63.636	ENSMFAG00000009115	LSM10	98	63.636	Macaca_fascicularis
ENSMAMG00000004427	oscp1a	99	63.636	ENSMMUG00000017338	LSM10	98	63.636	Macaca_mulatta
ENSMAMG00000004427	oscp1a	99	63.636	ENSMNEG00000020023	LSM10	98	63.636	Macaca_nemestrina
ENSMAMG00000004427	oscp1a	99	63.636	ENSMLEG00000025150	LSM10	98	63.636	Mandrillus_leucophaeus
ENSMAMG00000004427	oscp1a	98	84.167	ENSMZEG00005026307	oscp1a	98	84.167	Maylandia_zebra
ENSMAMG00000004427	oscp1a	98	63.025	ENSMGAG00000015707	LSM10	97	63.025	Meleagris_gallopavo
ENSMAMG00000004427	oscp1a	98	65.000	ENSMAUG00000016624	Lsm10	98	65.000	Mesocricetus_auratus
ENSMAMG00000004427	oscp1a	98	64.167	ENSMOCG00000021943	Lsm10	98	64.167	Microtus_ochrogaster
ENSMAMG00000004427	oscp1a	93	85.965	ENSMMOG00000013597	oscp1a	85	85.965	Mola_mola
ENSMAMG00000004427	oscp1a	100	68.293	ENSMODG00000023328	LSM10	100	68.293	Monodelphis_domestica
ENSMAMG00000004427	oscp1a	59	83.333	ENSMALG00000012661	oscp1a	57	83.333	Monopterus_albus
ENSMAMG00000004427	oscp1a	98	64.167	MGP_CAROLIEiJ_G0026467	Lsm10	100	67.742	Mus_caroli
ENSMAMG00000004427	oscp1a	98	64.167	ENSMUSG00000050188	Lsm10	100	67.742	Mus_musculus
ENSMAMG00000004427	oscp1a	98	64.167	MGP_PahariEiJ_G0028798	Lsm10	100	67.742	Mus_pahari
ENSMAMG00000004427	oscp1a	98	64.167	MGP_SPRETEiJ_G0027446	Lsm10	100	67.742	Mus_spretus
ENSMAMG00000004427	oscp1a	98	65.833	ENSMPUG00000018593	LSM10	98	65.833	Mustela_putorius_furo
ENSMAMG00000004427	oscp1a	98	65.833	ENSMLUG00000023895	LSM10	98	65.833	Myotis_lucifugus
ENSMAMG00000004427	oscp1a	100	62.295	ENSNGAG00000015011	Lsm10	99	62.295	Nannospalax_galili
ENSMAMG00000004427	oscp1a	98	85.833	ENSNBRG00000014306	oscp1a	98	85.833	Neolamprologus_brichardi
ENSMAMG00000004427	oscp1a	99	64.463	ENSNLEG00000033754	LSM10	98	64.463	Nomascus_leucogenys
ENSMAMG00000004427	oscp1a	98	67.500	ENSMEUG00000006313	LSM10	98	67.500	Notamacropus_eugenii
ENSMAMG00000004427	oscp1a	98	65.833	ENSOPRG00000001699	LSM10	98	65.833	Ochotona_princeps
ENSMAMG00000004427	oscp1a	98	65.833	ENSODEG00000019161	LSM10	98	65.833	Octodon_degus
ENSMAMG00000004427	oscp1a	98	85.833	ENSONIG00000020904	oscp1a	98	85.833	Oreochromis_niloticus
ENSMAMG00000004427	oscp1a	100	66.667	ENSOANG00000002066	LSM10	100	66.667	Ornithorhynchus_anatinus
ENSMAMG00000004427	oscp1a	98	65.833	ENSOCUG00000005333	LSM10	98	65.833	Oryctolagus_cuniculus
ENSMAMG00000004427	oscp1a	98	79.167	ENSORLG00000009504	oscp1a	99	79.167	Oryzias_latipes
ENSMAMG00000004427	oscp1a	98	79.167	ENSORLG00020016201	oscp1a	99	79.167	Oryzias_latipes_hni
ENSMAMG00000004427	oscp1a	98	78.333	ENSORLG00015007794	oscp1a	99	78.333	Oryzias_latipes_hsok
ENSMAMG00000004427	oscp1a	98	65.833	ENSOGAG00000002653	LSM10	98	65.833	Otolemur_garnettii
ENSMAMG00000004427	oscp1a	100	63.115	ENSOARG00000009596	LSM10	100	63.115	Ovis_aries
ENSMAMG00000004427	oscp1a	99	64.463	ENSPPAG00000023465	LSM10	98	64.463	Pan_paniscus
ENSMAMG00000004427	oscp1a	98	65.000	ENSPPRG00000014619	LSM10	98	65.000	Panthera_pardus
ENSMAMG00000004427	oscp1a	98	65.000	ENSPTIG00000004613	LSM10	98	65.000	Panthera_tigris_altaica
ENSMAMG00000004427	oscp1a	99	64.463	ENSPTRG00000000539	LSM10	98	64.463	Pan_troglodytes
ENSMAMG00000004427	oscp1a	99	63.636	ENSPANG00000023172	LSM10	98	63.636	Papio_anubis
ENSMAMG00000004427	oscp1a	99	72.727	ENSPKIG00000003728	oscp1a	98	72.727	Paramormyrops_kingsleyae
ENSMAMG00000004427	oscp1a	97	63.559	ENSPSIG00000000590	LSM10	96	63.559	Pelodiscus_sinensis
ENSMAMG00000004427	oscp1a	62	73.684	ENSPMGG00000015718	oscp1a	99	73.684	Periophthalmus_magnuspinnatus
ENSMAMG00000004427	oscp1a	84	69.903	ENSPCIG00000014865	LSM10	76	69.903	Phascolarctos_cinereus
ENSMAMG00000004427	oscp1a	95	72.414	ENSPFOG00000020490	oscp1a	98	72.414	Poecilia_formosa
ENSMAMG00000004427	oscp1a	96	72.650	ENSPLAG00000016537	oscp1a	89	72.650	Poecilia_latipinna
ENSMAMG00000004427	oscp1a	93	71.681	ENSPMEG00000000174	oscp1a	98	71.681	Poecilia_mexicana
ENSMAMG00000004427	oscp1a	96	73.504	ENSPREG00000009899	oscp1a	89	73.504	Poecilia_reticulata
ENSMAMG00000004427	oscp1a	99	64.463	ENSPPYG00000001539	LSM10	98	64.463	Pongo_abelii
ENSMAMG00000004427	oscp1a	100	63.934	ENSPCAG00000002520	LSM10	100	63.934	Procavia_capensis
ENSMAMG00000004427	oscp1a	98	66.667	ENSPVAG00000008644	LSM10	98	66.667	Pteropus_vampyrus
ENSMAMG00000004427	oscp1a	98	85.000	ENSPNYG00000003138	oscp1a	98	85.000	Pundamilia_nyererei
ENSMAMG00000004427	oscp1a	98	73.950	ENSPNAG00000028829	oscp1a	98	73.950	Pygocentrus_nattereri
ENSMAMG00000004427	oscp1a	98	63.333	ENSRNOG00000025716	Lsm10	98	63.333	Rattus_norvegicus
ENSMAMG00000004427	oscp1a	99	63.636	ENSRBIG00000001561	LSM10	98	63.636	Rhinopithecus_bieti
ENSMAMG00000004427	oscp1a	99	63.636	ENSRROG00000011414	LSM10	98	63.636	Rhinopithecus_roxellana
ENSMAMG00000004427	oscp1a	99	65.289	ENSSBOG00000036413	-	98	65.289	Saimiri_boliviensis_boliviensis
ENSMAMG00000004427	oscp1a	98	67.500	ENSSHAG00000018056	LSM10	98	67.500	Sarcophilus_harrisii
ENSMAMG00000004427	oscp1a	98	70.833	ENSSFOG00015019954	lsm10	98	70.833	Scleropages_formosus
ENSMAMG00000004427	oscp1a	96	88.034	ENSSMAG00000001297	oscp1a	100	88.034	Scophthalmus_maximus
ENSMAMG00000004427	oscp1a	97	79.661	ENSSDUG00000007090	oscp1a	96	79.661	Seriola_dumerili
ENSMAMG00000004427	oscp1a	97	80.508	ENSSLDG00000000800	oscp1a	98	80.508	Seriola_lalandi_dorsalis
ENSMAMG00000004427	oscp1a	88	68.224	ENSSARG00000004211	LSM10	98	64.754	Sorex_araneus
ENSMAMG00000004427	oscp1a	96	88.889	ENSSPAG00000009229	oscp1a	97	88.889	Stegastes_partitus
ENSMAMG00000004427	oscp1a	100	63.115	ENSSSCG00000038916	LSM10	99	63.115	Sus_scrofa
ENSMAMG00000004427	oscp1a	97	61.864	ENSTGUG00000001600	-	97	61.864	Taeniopygia_guttata
ENSMAMG00000004427	oscp1a	97	62.712	ENSTGUG00000001602	-	97	62.712	Taeniopygia_guttata
ENSMAMG00000004427	oscp1a	98	78.151	ENSTRUG00000010531	oscp1a	96	78.151	Takifugu_rubripes
ENSMAMG00000004427	oscp1a	99	64.463	ENSTBEG00000016674	LSM10	98	64.463	Tupaia_belangeri
ENSMAMG00000004427	oscp1a	98	65.833	ENSUAMG00000020265	LSM10	98	65.833	Ursus_americanus
ENSMAMG00000004427	oscp1a	98	65.833	ENSUMAG00000001438	LSM10	55	65.833	Ursus_maritimus
ENSMAMG00000004427	oscp1a	98	65.833	ENSVVUG00000023209	LSM10	98	65.833	Vulpes_vulpes
ENSMAMG00000004427	oscp1a	98	61.667	ENSXETG00000027631	lsm10	98	61.667	Xenopus_tropicalis
ENSMAMG00000004427	oscp1a	97	72.881	ENSXCOG00000018776	oscp1a	74	72.881	Xiphophorus_couchianus
ENSMAMG00000004427	oscp1a	92	73.214	ENSXMAG00000019963	oscp1a	90	73.214	Xiphophorus_maculatus