EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000004463 (Gene tree)
Gene ID: 113137163
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 12D
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 13979 bases
Position: chrOOHQ01000069.1:5217686-5231664
Accession: 113137163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006566	RNase_Zc3h12a	PF11977.8	1.4e-62	1	1
ENSMAMP00000006581	RNase_Zc3h12a	PF11977.8	2.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006749	-	5228	-	ENSMAMP00000006566	601 (aa)	XP_026174412	UPI000E464C9B
ENSMAMT00000006764	-	792	-	ENSMAMP00000006581	263 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000004463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000004463	-	83	56.828	ENSMAMG00000007494	zc3h12a	96	40.000
ENSMAMG00000004463	-	88	52.846	ENSMAMG00000021794	-	88	52.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004463	-	100	54.317	ENSG00000163874	ZC3H12A	95	55.109	Homo_sapiens
ENSMAMG00000004463	-	83	58.986	ENSAPOG00000001632	-	57	61.268	Acanthochromis_polyacanthus
ENSMAMG00000004463	-	87	88.210	ENSAPOG00000005848	-	100	74.673	Acanthochromis_polyacanthus
ENSMAMG00000004463	-	90	57.787	ENSAMEG00000000991	ZC3H12A	52	60.065	Ailuropoda_melanoleuca
ENSMAMG00000004463	-	91	84.711	ENSACIG00000006790	-	92	82.192	Amphilophus_citrinellus
ENSMAMG00000004463	-	87	54.357	ENSACIG00000004135	si:dkey-206d17.12	80	55.895	Amphilophus_citrinellus
ENSMAMG00000004463	-	83	53.540	ENSACIG00000017750	zc3h12a	97	39.187	Amphilophus_citrinellus
ENSMAMG00000004463	-	87	87.773	ENSAOCG00000009106	-	100	75.163	Amphiprion_ocellaris
ENSMAMG00000004463	-	89	51.230	ENSAOCG00000014937	zc3h12a	98	39.780	Amphiprion_ocellaris
ENSMAMG00000004463	-	83	54.468	ENSAOCG00000001288	-	85	57.511	Amphiprion_ocellaris
ENSMAMG00000004463	-	88	52.610	ENSAOCG00000003866	-	90	54.918	Amphiprion_ocellaris
ENSMAMG00000004463	-	83	55.656	ENSAOCG00000014326	-	87	54.667	Amphiprion_ocellaris
ENSMAMG00000004463	-	83	54.894	ENSAPEG00000022263	-	85	57.940	Amphiprion_percula
ENSMAMG00000004463	-	83	55.656	ENSAPEG00000021795	si:dkey-206d17.12	87	55.111	Amphiprion_percula
ENSMAMG00000004463	-	88	52.016	ENSAPEG00000005727	-	96	44.231	Amphiprion_percula
ENSMAMG00000004463	-	87	87.773	ENSAPEG00000004229	-	100	75.163	Amphiprion_percula
ENSMAMG00000004463	-	89	51.230	ENSAPEG00000006072	zc3h12a	50	55.452	Amphiprion_percula
ENSMAMG00000004463	-	83	90.868	ENSATEG00000013053	-	99	74.087	Anabas_testudineus
ENSMAMG00000004463	-	83	55.895	ENSATEG00000006140	si:dkey-206d17.12	86	45.033	Anabas_testudineus
ENSMAMG00000004463	-	85	55.983	ENSATEG00000009946	zc3h12a	96	39.228	Anabas_testudineus
ENSMAMG00000004463	-	83	56.780	ENSATEG00000002260	-	83	57.143	Anabas_testudineus
ENSMAMG00000004463	-	83	57.456	ENSACAG00000017285	ZC3H12A	50	59.740	Anolis_carolinensis
ENSMAMG00000004463	-	90	58.367	ENSANAG00000009908	ZC3H12A	86	58.197	Aotus_nancymaae
ENSMAMG00000004463	-	88	53.750	ENSACLG00000027801	zc3h12a	97	39.326	Astatotilapia_calliptera
ENSMAMG00000004463	-	90	88.136	ENSACLG00000018534	-	100	72.330	Astatotilapia_calliptera
ENSMAMG00000004463	-	86	70.124	ENSAMXG00000030754	-	99	50.332	Astyanax_mexicanus
ENSMAMG00000004463	-	92	52.800	ENSAMXG00000029641	si:dkey-206d17.12	83	52.800	Astyanax_mexicanus
ENSMAMG00000004463	-	83	53.648	ENSAMXG00000001736	zc3h12a	50	56.508	Astyanax_mexicanus
ENSMAMG00000004463	-	92	58.167	ENSBTAG00000011316	ZC3H12A	53	60.692	Bos_taurus
ENSMAMG00000004463	-	96	56.538	ENSCJAG00000041792	ZC3H12A	51	61.165	Callithrix_jacchus
ENSMAMG00000004463	-	90	57.202	ENSCAFG00000003304	ZC3H12A	54	58.991	Canis_familiaris
ENSMAMG00000004463	-	90	57.202	ENSCAFG00020008620	ZC3H12A	54	58.991	Canis_lupus_dingo
ENSMAMG00000004463	-	92	58.167	ENSCHIG00000021957	ZC3H12A	53	60.377	Capra_hircus
ENSMAMG00000004463	-	100	54.244	ENSTSYG00000035959	ZC3H12A	51	60.328	Carlito_syrichta
ENSMAMG00000004463	-	83	63.063	ENSCAPG00000015365	ZC3H12A	52	64.583	Cavia_aperea
ENSMAMG00000004463	-	83	62.613	ENSCPOG00000011081	ZC3H12A	52	64.236	Cavia_porcellus
ENSMAMG00000004463	-	90	59.184	ENSCCAG00000023848	ZC3H12A	52	60.510	Cebus_capucinus
ENSMAMG00000004463	-	100	54.676	ENSCATG00000037700	ZC3H12A	95	54.945	Cercocebus_atys
ENSMAMG00000004463	-	100	55.160	ENSCSAG00000001106	ZC3H12A	52	61.006	Chlorocebus_sabaeus
ENSMAMG00000004463	-	100	55.197	ENSCANG00000042287	ZC3H12A	95	55.474	Colobus_angolensis_palliatus
ENSMAMG00000004463	-	92	49.416	ENSCSEG00000019043	zc3h12a	95	38.487	Cynoglossus_semilaevis
ENSMAMG00000004463	-	89	52.778	ENSCSEG00000010073	-	91	50.549	Cynoglossus_semilaevis
ENSMAMG00000004463	-	91	53.968	ENSCVAG00000016808	-	96	54.331	Cyprinodon_variegatus
ENSMAMG00000004463	-	87	51.709	ENSCVAG00000001516	si:dkey-206d17.12	50	54.397	Cyprinodon_variegatus
ENSMAMG00000004463	-	87	86.842	ENSCVAG00000001077	-	94	79.767	Cyprinodon_variegatus
ENSMAMG00000004463	-	83	58.182	ENSDARG00000005271	zc3h12a	78	62.199	Danio_rerio
ENSMAMG00000004463	-	83	61.607	ENSDORG00000012666	Zc3h12a	52	59.937	Dipodomys_ordii
ENSMAMG00000004463	-	83	43.750	ENSETEG00000018311	ZC3H12A	59	49.655	Echinops_telfairi
ENSMAMG00000004463	-	96	55.000	ENSEASG00005012220	ZC3H12A	53	59.223	Equus_asinus_asinus
ENSMAMG00000004463	-	96	55.000	ENSECAG00000009562	ZC3H12A	50	59.223	Equus_caballus
ENSMAMG00000004463	-	72	61.735	ENSEEUG00000005907	ZC3H12A	52	64.122	Erinaceus_europaeus
ENSMAMG00000004463	-	78	77.512	ENSELUG00000018728	-	89	55.196	Esox_lucius
ENSMAMG00000004463	-	92	56.400	ENSFCAG00000008757	ZC3H12A	52	58.991	Felis_catus
ENSMAMG00000004463	-	96	55.985	ENSFDAG00000006446	ZC3H12A	92	41.681	Fukomys_damarensis
ENSMAMG00000004463	-	83	55.172	ENSFHEG00000021225	-	82	47.059	Fundulus_heteroclitus
ENSMAMG00000004463	-	86	83.111	ENSFHEG00000011425	-	100	64.410	Fundulus_heteroclitus
ENSMAMG00000004463	-	63	82.400	ENSGMOG00000014437	-	94	65.292	Gadus_morhua
ENSMAMG00000004463	-	83	52.535	ENSGMOG00000017603	si:dkey-206d17.12	60	54.795	Gadus_morhua
ENSMAMG00000004463	-	83	49.372	ENSGMOG00000007388	-	54	54.333	Gadus_morhua
ENSMAMG00000004463	-	85	85.022	ENSGAFG00000009523	-	99	66.025	Gambusia_affinis
ENSMAMG00000004463	-	83	51.965	ENSGAFG00000019001	si:dkey-206d17.12	55	54.754	Gambusia_affinis
ENSMAMG00000004463	-	88	52.263	ENSGACG00000002341	si:dkey-206d17.12	54	57.432	Gasterosteus_aculeatus
ENSMAMG00000004463	-	87	53.782	ENSGACG00000013859	zc3h12a	52	57.756	Gasterosteus_aculeatus
ENSMAMG00000004463	-	84	84.615	ENSGACG00000006636	-	94	86.195	Gasterosteus_aculeatus
ENSMAMG00000004463	-	86	59.130	ENSGAGG00000003881	ZC3H12A	91	40.289	Gopherus_agassizii
ENSMAMG00000004463	-	100	54.317	ENSGGOG00000009268	ZC3H12A	52	60.377	Gorilla_gorilla
ENSMAMG00000004463	-	90	88.136	ENSHBUG00000021584	-	99	83.908	Haplochromis_burtoni
ENSMAMG00000004463	-	88	53.750	ENSHBUG00000009356	zc3h12a	97	39.165	Haplochromis_burtoni
ENSMAMG00000004463	-	84	57.658	ENSHCOG00000008878	-	59	46.795	Hippocampus_comes
ENSMAMG00000004463	-	60	68.153	ENSHCOG00000007306	-	92	68.153	Hippocampus_comes
ENSMAMG00000004463	-	87	49.160	ENSHCOG00000004255	si:dkey-206d17.12	93	48.085	Hippocampus_comes
ENSMAMG00000004463	-	84	74.775	ENSIPUG00000011663	-	99	52.613	Ictalurus_punctatus
ENSMAMG00000004463	-	96	56.538	ENSSTOG00000026842	ZC3H12A	51	61.489	Ictidomys_tridecemlineatus
ENSMAMG00000004463	-	88	59.916	ENSJJAG00000004252	Zc3h12a	52	60.443	Jaculus_jaculus
ENSMAMG00000004463	-	83	54.795	ENSKMAG00000002156	ZC3H12A	83	54.795	Kryptolebias_marmoratus
ENSMAMG00000004463	-	83	56.087	ENSKMAG00000013285	-	86	58.369	Kryptolebias_marmoratus
ENSMAMG00000004463	-	84	85.586	ENSKMAG00000014401	-	99	65.832	Kryptolebias_marmoratus
ENSMAMG00000004463	-	94	72.396	ENSLBEG00000012121	-	100	72.396	Labrus_bergylta
ENSMAMG00000004463	-	84	54.622	ENSLBEG00000012554	-	81	47.945	Labrus_bergylta
ENSMAMG00000004463	-	95	58.238	ENSLACG00000017365	ZC3H12A	94	43.833	Latimeria_chalumnae
ENSMAMG00000004463	-	90	54.656	ENSLOCG00000003232	si:dkey-206d17.12	53	58.258	Lepisosteus_oculatus
ENSMAMG00000004463	-	85	72.889	ENSLOCG00000017000	-	100	51.494	Lepisosteus_oculatus
ENSMAMG00000004463	-	100	54.676	ENSMFAG00000032647	ZC3H12A	95	54.945	Macaca_fascicularis
ENSMAMG00000004463	-	100	54.676	ENSMMUG00000010323	ZC3H12A	52	60.692	Macaca_mulatta
ENSMAMG00000004463	-	83	62.667	ENSMNEG00000040453	ZC3H12A	95	54.945	Macaca_nemestrina
ENSMAMG00000004463	-	100	54.676	ENSMLEG00000034570	ZC3H12A	95	54.945	Mandrillus_leucophaeus
ENSMAMG00000004463	-	88	53.750	ENSMZEG00005006997	zc3h12a	97	39.326	Maylandia_zebra
ENSMAMG00000004463	-	90	88.136	ENSMZEG00005015555	-	100	72.168	Maylandia_zebra
ENSMAMG00000004463	-	92	51.575	ENSMZEG00005023410	ZC3H12A	85	51.575	Maylandia_zebra
ENSMAMG00000004463	-	86	57.759	ENSMZEG00005019137	-	92	48.366	Maylandia_zebra
ENSMAMG00000004463	-	85	59.211	ENSMGAG00000003371	ZC3H12A	51	61.333	Meleagris_gallopavo
ENSMAMG00000004463	-	96	56.371	ENSMICG00000004790	ZC3H12A	52	59.306	Microcebus_murinus
ENSMAMG00000004463	-	95	51.685	ENSMMOG00000005728	-	88	44.805	Mola_mola
ENSMAMG00000004463	-	83	54.386	ENSMMOG00000000727	zc3h12a	94	41.278	Mola_mola
ENSMAMG00000004463	-	89	82.203	ENSMMOG00000014855	-	92	81.857	Mola_mola
ENSMAMG00000004463	-	83	53.070	ENSMMOG00000013604	si:dkey-206d17.12	52	57.770	Mola_mola
ENSMAMG00000004463	-	89	91.064	ENSMALG00000018908	-	100	71.354	Monopterus_albus
ENSMAMG00000004463	-	96	56.589	MGP_SPRETEiJ_G0027441	Zc3h12a	96	54.545	Mus_spretus
ENSMAMG00000004463	-	91	57.085	ENSMPUG00000014758	ZC3H12A	53	60.065	Mustela_putorius_furo
ENSMAMG00000004463	-	92	57.200	ENSMLUG00000027279	ZC3H12A	52	60.518	Myotis_lucifugus
ENSMAMG00000004463	-	83	56.034	ENSNBRG00000012175	-	92	47.059	Neolamprologus_brichardi
ENSMAMG00000004463	-	90	87.712	ENSNBRG00000010961	-	93	85.542	Neolamprologus_brichardi
ENSMAMG00000004463	-	88	55.102	ENSNBRG00000009607	zc3h12a	97	36.825	Neolamprologus_brichardi
ENSMAMG00000004463	-	80	47.418	ENSMEUG00000003389	ZC3H12A	51	44.643	Notamacropus_eugenii
ENSMAMG00000004463	-	92	51.575	ENSONIG00000013685	si:dkey-206d17.12	54	57.475	Oreochromis_niloticus
ENSMAMG00000004463	-	88	55.328	ENSONIG00000016235	zc3h12a	54	58.252	Oreochromis_niloticus
ENSMAMG00000004463	-	83	61.607	ENSOCUG00000010856	ZC3H12A	79	59.621	Oryctolagus_cuniculus
ENSMAMG00000004463	-	86	84.513	ENSORLG00000015280	-	100	62.238	Oryzias_latipes
ENSMAMG00000004463	-	88	52.479	ENSORLG00000009473	ZC3H12A	89	52.479	Oryzias_latipes
ENSMAMG00000004463	-	83	84.932	ENSORLG00020008580	-	91	60.661	Oryzias_latipes_hni
ENSMAMG00000004463	-	83	54.626	ENSORLG00020016107	-	51	57.192	Oryzias_latipes_hni
ENSMAMG00000004463	-	83	54.185	ENSORLG00015007634	ZC3H12A	51	57.192	Oryzias_latipes_hsok
ENSMAMG00000004463	-	83	84.932	ENSORLG00015003680	-	91	60.826	Oryzias_latipes_hsok
ENSMAMG00000004463	-	86	85.841	ENSOMEG00000011669	-	100	62.674	Oryzias_melastigma
ENSMAMG00000004463	-	85	54.310	ENSOMEG00000005602	si:dkey-206d17.12	52	58.249	Oryzias_melastigma
ENSMAMG00000004463	-	85	55.459	ENSOMEG00000000483	zc3h12a	93	39.742	Oryzias_melastigma
ENSMAMG00000004463	-	96	55.598	ENSOGAG00000030940	ZC3H12A	95	39.935	Otolemur_garnettii
ENSMAMG00000004463	-	92	57.769	ENSOARG00000019760	ZC3H12A	71	60.518	Ovis_aries
ENSMAMG00000004463	-	100	53.430	ENSPPAG00000041054	ZC3H12A	95	54.212	Pan_paniscus
ENSMAMG00000004463	-	92	56.400	ENSPPRG00000014359	ZC3H12A	50	60.526	Panthera_pardus
ENSMAMG00000004463	-	92	56.400	ENSPTIG00000012943	ZC3H12A	88	56.400	Panthera_tigris_altaica
ENSMAMG00000004463	-	100	53.430	ENSPTRG00000000544	ZC3H12A	95	54.212	Pan_troglodytes
ENSMAMG00000004463	-	100	54.317	ENSPANG00000011821	ZC3H12A	95	54.579	Papio_anubis
ENSMAMG00000004463	-	86	72.609	ENSPKIG00000019720	-	99	50.853	Paramormyrops_kingsleyae
ENSMAMG00000004463	-	86	58.798	ENSPSIG00000009198	ZC3H12A	52	62.207	Pelodiscus_sinensis
ENSMAMG00000004463	-	89	52.119	ENSPMGG00000009790	-	53	57.679	Periophthalmus_magnuspinnatus
ENSMAMG00000004463	-	88	51.250	ENSPMGG00000004114	zc3h12a	52	57.095	Periophthalmus_magnuspinnatus
ENSMAMG00000004463	-	68	36.077	ENSPFOG00000002933	si:dkey-206d17.12	97	36.098	Poecilia_formosa
ENSMAMG00000004463	-	84	86.161	ENSPFOG00000004135	-	99	67.190	Poecilia_formosa
ENSMAMG00000004463	-	68	36.320	ENSPLAG00000016243	si:dkey-206d17.12	89	36.341	Poecilia_latipinna
ENSMAMG00000004463	-	83	86.425	ENSPLAG00000001211	-	99	67.133	Poecilia_latipinna
ENSMAMG00000004463	-	83	53.275	ENSPMEG00000011188	si:dkey-206d17.12	92	38.819	Poecilia_mexicana
ENSMAMG00000004463	-	84	86.486	ENSPMEG00000009279	-	88	86.486	Poecilia_mexicana
ENSMAMG00000004463	-	83	58.222	ENSPREG00000001607	-	73	59.292	Poecilia_reticulata
ENSMAMG00000004463	-	91	80.913	ENSPREG00000020369	-	95	66.724	Poecilia_reticulata
ENSMAMG00000004463	-	83	57.018	ENSPREG00000005453	zc3h12a	98	38.863	Poecilia_reticulata
ENSMAMG00000004463	-	100	53.737	ENSPPYG00000001534	ZC3H12A	52	60.377	Pongo_abelii
ENSMAMG00000004463	-	96	55.598	ENSPCOG00000015837	ZC3H12A	51	59.740	Propithecus_coquereli
ENSMAMG00000004463	-	90	88.136	ENSPNYG00000010663	-	100	72.330	Pundamilia_nyererei
ENSMAMG00000004463	-	88	53.750	ENSPNYG00000013534	zc3h12a	97	39.326	Pundamilia_nyererei
ENSMAMG00000004463	-	85	73.222	ENSPNAG00000012124	-	99	50.165	Pygocentrus_nattereri
ENSMAMG00000004463	-	100	54.676	ENSRBIG00000042237	ZC3H12A	54	61.165	Rhinopithecus_bieti
ENSMAMG00000004463	-	100	54.676	ENSRROG00000037444	ZC3H12A	95	54.945	Rhinopithecus_roxellana
ENSMAMG00000004463	-	90	58.776	ENSSBOG00000028357	ZC3H12A	52	60.191	Saimiri_boliviensis_boliviensis
ENSMAMG00000004463	-	63	64.740	ENSSFOG00015005925	zc3h12a	57	64.535	Scleropages_formosus
ENSMAMG00000004463	-	85	54.661	ENSSMAG00000005140	zc3h12a	97	40.484	Scophthalmus_maximus
ENSMAMG00000004463	-	86	88.444	ENSSMAG00000017632	-	99	74.479	Scophthalmus_maximus
ENSMAMG00000004463	-	99	77.467	ENSSDUG00000010581	-	96	85.944	Seriola_dumerili
ENSMAMG00000004463	-	83	54.237	ENSSDUG00000013237	-	89	51.408	Seriola_dumerili
ENSMAMG00000004463	-	85	55.603	ENSSDUG00000009879	zc3h12a	51	57.278	Seriola_dumerili
ENSMAMG00000004463	-	85	56.034	ENSSLDG00000003826	zc3h12a	51	57.595	Seriola_lalandi_dorsalis
ENSMAMG00000004463	-	90	52.549	ENSSLDG00000009317	si:dkey-206d17.12	96	52.471	Seriola_lalandi_dorsalis
ENSMAMG00000004463	-	99	77.632	ENSSLDG00000022022	-	100	77.632	Seriola_lalandi_dorsalis
ENSMAMG00000004463	-	87	52.941	ENSSPAG00000020938	si:dkey-206d17.12	55	56.913	Stegastes_partitus
ENSMAMG00000004463	-	90	88.559	ENSSPAG00000022537	-	99	75.980	Stegastes_partitus
ENSMAMG00000004463	-	92	57.371	ENSSSCG00000037815	ZC3H12A	53	60.577	Sus_scrofa
ENSMAMG00000004463	-	86	53.782	ENSTRUG00000010565	si:dkey-206d17.12	52	55.806	Takifugu_rubripes
ENSMAMG00000004463	-	92	52.107	ENSTNIG00000014519	-	94	52.510	Tetraodon_nigroviridis
ENSMAMG00000004463	-	83	55.656	ENSTNIG00000001274	si:dkey-206d17.12	55	57.045	Tetraodon_nigroviridis
ENSMAMG00000004463	-	93	57.143	ENSTTRG00000008591	ZC3H12A	51	60.194	Tursiops_truncatus
ENSMAMG00000004463	-	90	57.787	ENSUAMG00000014105	ZC3H12A	51	60.065	Ursus_americanus
ENSMAMG00000004463	-	90	57.377	ENSUMAG00000001122	ZC3H12A	53	59.740	Ursus_maritimus
ENSMAMG00000004463	-	84	59.649	ENSVVUG00000023171	ZC3H12A	55	58.154	Vulpes_vulpes
ENSMAMG00000004463	-	84	58.667	ENSXETG00000011465	zc3h12a	53	62.543	Xenopus_tropicalis
ENSMAMG00000004463	-	83	54.222	ENSXCOG00000008984	zc3h12a	92	44.295	Xiphophorus_couchianus
ENSMAMG00000004463	-	84	86.607	ENSXCOG00000001538	-	91	81.633	Xiphophorus_couchianus
ENSMAMG00000004463	-	84	86.607	ENSXMAG00000005023	-	91	81.633	Xiphophorus_maculatus
ENSMAMG00000004463	-	83	57.778	ENSXMAG00000014715	-	83	58.772	Xiphophorus_maculatus
ENSMAMG00000004463	-	83	51.965	ENSXMAG00000025043	si:dkey-206d17.12	55	52.751	Xiphophorus_maculatus