EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000004502 (Gene tree)
Gene ID
113122468
Gene Symbol
-
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
9361 bases
Position
chrOOHQ01000075.1:21867181-21876541
Accession
113122468
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000006646PABPPF00658.187.3e-3211
ENSMAMP00000006689PABPPF00658.181.7e-2311
ENSMAMP00000006689RRM_5PF13893.62.4e-0812
ENSMAMP00000006689RRM_5PF13893.62.4e-0822
ENSMAMP00000006646RRM_5PF13893.64.3e-0812
ENSMAMP00000006646RRM_5PF13893.64.3e-0822
ENSMAMP00000006646RRM_1PF00076.224.7e-9314
ENSMAMP00000006646RRM_1PF00076.224.7e-9324
ENSMAMP00000006646RRM_1PF00076.224.7e-9334
ENSMAMP00000006646RRM_1PF00076.224.7e-9344
ENSMAMP00000006689RRM_1PF00076.221.2e-8614
ENSMAMP00000006689RRM_1PF00076.221.2e-8624
ENSMAMP00000006689RRM_1PF00076.221.2e-8634
ENSMAMP00000006689RRM_1PF00076.221.2e-8644
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000006832-5655-ENSMAMP00000006646635 (aa)XP_026149639UPI000E45F9E8
ENSMAMT00000006874-1545-ENSMAMP00000006689514 (aa)--
Gene Model
Click here to download ENSMAMG00000004502's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004502's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000004502-6836.145ENSMAMG00000004000elavl48736.145
ENSMAMG00000004502-10093.285ENSMAMG00000014610pabpc1b10089.498
ENSMAMG00000004502-5536.986ENSMAMG00000015079celf3b5736.986
ENSMAMG00000004502-7039.759ENSMAMG00000019440celf5a6239.759
ENSMAMG00000004502-9575.342ENSMAMG00000011854pabpc1l9768.026
ENSMAMG00000004502-5241.429ENSMAMG00000005612hnrnpm5041.429
ENSMAMG00000004502-9783.696ENSMAMG00000010025pabpc49875.941
ENSMAMG00000004502-5734.884ENSMAMG00000017876-5934.091
ENSMAMG00000004502-5830.000ENSMAMG00000020566-7030.000
ENSMAMG00000004502-5936.986ENSMAMG00000001436celf3a6136.986
ENSMAMG00000004502-6738.095ENSMAMG00000014692sf3b47138.798
ENSMAMG00000004502-6737.333ENSMAMG00000014397rbm197037.333
ENSMAMG00000004502-6837.349ENSMAMG00000004806ELAVL29237.349
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000004502-6878.889ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSMAMG00000004502-6878.889ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSMAMG00000004502-10098.268ENSAPOG00000015105pabpc1a10098.268Acanthochromis_polyacanthus
ENSMAMG00000004502-10093.525ENSAPOG00000017776pabpc1b10090.125Acanthochromis_polyacanthus
ENSMAMG00000004502-6878.889ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSMAMG00000004502-10097.953ENSACIG00000004685pabpc1a10097.953Amphilophus_citrinellus
ENSMAMG00000004502-10092.566ENSACIG00000018366pabpc1b10085.803Amphilophus_citrinellus
ENSMAMG00000004502-10098.425ENSAOCG00000011656pabpc1a10098.425Amphiprion_ocellaris
ENSMAMG00000004502-10090.125ENSAOCG00000019839pabpc1b10089.655Amphiprion_ocellaris
ENSMAMG00000004502-10098.425ENSAPEG00000006963pabpc1a10098.425Amphiprion_percula
ENSMAMG00000004502-10090.125ENSAPEG00000010435pabpc1b10089.655Amphiprion_percula
ENSMAMG00000004502-10089.679ENSATEG00000012917pabpc1b10089.515Anabas_testudineus
ENSMAMG00000004502-10098.740ENSATEG00000024852pabpc1a10098.740Anabas_testudineus
ENSMAMG00000004502-6878.889ENSANAG00000019429-9880.102Aotus_nancymaae
ENSMAMG00000004502-6878.889ENSANAG00000019431-9880.102Aotus_nancymaae
ENSMAMG00000004502-10097.795ENSACLG00000009399pabpc1a9998.798Astatotilapia_calliptera
ENSMAMG00000004502-10092.788ENSACLG00000014335pabpc1b9992.788Astatotilapia_calliptera
ENSMAMG00000004502-10090.826ENSAMXG00000008599pabpc1b9990.826Astyanax_mexicanus
ENSMAMG00000004502-6878.889ENSBTAG00000050902-9879.024Bos_taurus
ENSMAMG00000004502-6878.889ENSBTAG00000052491-9778.889Bos_taurus
ENSMAMG00000004502-6878.889ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSMAMG00000004502-6878.889ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSMAMG00000004502-6878.889ENSCHIG00000011138-9880.102Capra_hircus
ENSMAMG00000004502-6878.889ENSCHIG00000006283-9880.102Capra_hircus
ENSMAMG00000004502-6878.889ENSTSYG00000001775-9880.102Carlito_syrichta
ENSMAMG00000004502-6878.889ENSCPOG00000009525-9880.102Cavia_porcellus
ENSMAMG00000004502-6878.889ENSCCAG00000031524-9880.102Cebus_capucinus
ENSMAMG00000004502-6878.889ENSCATG00000042826-9880.102Cercocebus_atys
ENSMAMG00000004502-6878.889ENSCATG00000043125-9880.102Cercocebus_atys
ENSMAMG00000004502-6876.667ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSMAMG00000004502-6876.667ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSMAMG00000004502-6878.889ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSMAMG00000004502-6879.641ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSMAMG00000004502-10089.474ENSCSEG00000015241-9989.474Cynoglossus_semilaevis
ENSMAMG00000004502-9998.558ENSCSEG00000013324pabpc1a10097.627Cynoglossus_semilaevis
ENSMAMG00000004502-10098.110ENSCVAG00000021872pabpc1a10098.110Cyprinodon_variegatus
ENSMAMG00000004502-10088.330ENSCVAG00000005489pabpc1b10087.480Cyprinodon_variegatus
ENSMAMG00000004502-10089.749ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSMAMG00000004502-10095.192ENSDARG00000017219pabpc1a9995.192Danio_rerio
ENSMAMG00000004502-6879.191ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSMAMG00000004502-6876.111ENSDORG00000011362-9877.551Dipodomys_ordii
ENSMAMG00000004502-6878.889ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSMAMG00000004502-6878.889ENSECAG00000002620-9878.641Equus_caballus
ENSMAMG00000004502-6875.000ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSMAMG00000004502-10090.023ENSELUG00000015062-9990.023Esox_lucius
ENSMAMG00000004502-9994.182ENSELUG00000003614pabpc1a10094.182Esox_lucius
ENSMAMG00000004502-6858.937ENSELUG00000005389-9758.621Esox_lucius
ENSMAMG00000004502-6878.889ENSFCAG00000039701-9880.102Felis_catus
ENSMAMG00000004502-6878.889ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSMAMG00000004502-10097.795ENSFHEG00000018979pabpc1a10097.795Fundulus_heteroclitus
ENSMAMG00000004502-10090.160ENSFHEG00000008186pabpc1b9990.160Fundulus_heteroclitus
ENSMAMG00000004502-9493.979ENSGMOG00000002448-10079.755Gadus_morhua
ENSMAMG00000004502-9994.495ENSGMOG00000013448pabpc1a9994.495Gadus_morhua
ENSMAMG00000004502-10097.323ENSGAFG00000019750pabpc1a10097.323Gambusia_affinis
ENSMAMG00000004502-10090.000ENSGAFG00000010193pabpc1b10089.812Gambusia_affinis
ENSMAMG00000004502-10089.016ENSGACG00000003771pabpc1b9989.016Gasterosteus_aculeatus
ENSMAMG00000004502-10097.795ENSGACG00000003572pabpc1a10097.795Gasterosteus_aculeatus
ENSMAMG00000004502-6878.889ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSMAMG00000004502-6878.889ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSMAMG00000004502-10092.788ENSHBUG00000002075pabpc1b9992.788Haplochromis_burtoni
ENSMAMG00000004502-10097.795ENSHBUG00000020487pabpc1a9998.798Haplochromis_burtoni
ENSMAMG00000004502-6877.778ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSMAMG00000004502-6877.778ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSMAMG00000004502-6877.778ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSMAMG00000004502-9284.483ENSHCOG00000003175pabpc1b9981.720Hippocampus_comes
ENSMAMG00000004502-10097.953ENSHCOG00000013502pabpc1a10097.953Hippocampus_comes
ENSMAMG00000004502-10095.422ENSIPUG00000008848pabpc1a9995.422Ictalurus_punctatus
ENSMAMG00000004502-7064.365ENSIPUG00000021244-6555.094Ictalurus_punctatus
ENSMAMG00000004502-7856.716ENSIPUG00000018724-7656.716Ictalurus_punctatus
ENSMAMG00000004502-10084.301ENSIPUG00000010791-10084.144Ictalurus_punctatus
ENSMAMG00000004502-6878.333ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSMAMG00000004502-6878.333ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSMAMG00000004502-6877.222ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSMAMG00000004502-10098.110ENSKMAG00000000605pabpc1a10098.110Kryptolebias_marmoratus
ENSMAMG00000004502-10090.682ENSKMAG00000008049pabpc1b9990.682Kryptolebias_marmoratus
ENSMAMG00000004502-10097.480ENSLBEG00000024002-10097.480Labrus_bergylta
ENSMAMG00000004502-10092.806ENSLBEG00000026845pabpc1b9992.806Labrus_bergylta
ENSMAMG00000004502-6877.778ENSLAFG00000023096-9878.974Loxodonta_africana
ENSMAMG00000004502-6878.453ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSMAMG00000004502-6878.889ENSMMUG00000009740-9880.102Macaca_mulatta
ENSMAMG00000004502-6878.889ENSMMUG00000037681-9880.102Macaca_mulatta
ENSMAMG00000004502-6878.889ENSMMUG00000039929-9880.102Macaca_mulatta
ENSMAMG00000004502-6878.889ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSMAMG00000004502-6878.889ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSMAMG00000004502-10097.795ENSMZEG00005025416pabpc1a9998.798Maylandia_zebra
ENSMAMG00000004502-10092.788ENSMZEG00005026745pabpc1b9992.788Maylandia_zebra
ENSMAMG00000004502-6878.889ENSMICG00000047642-9880.102Microcebus_murinus
ENSMAMG00000004502-10097.099ENSMMOG00000018044pabpc1a10097.099Mola_mola
ENSMAMG00000004502-10083.987ENSMMOG00000018009pabpc1b10083.830Mola_mola
ENSMAMG00000004502-9878.622ENSMODG00000013156-9878.622Monodelphis_domestica
ENSMAMG00000004502-9972.642ENSMODG00000015024-9972.642Monodelphis_domestica
ENSMAMG00000004502-10085.331ENSMALG00000006066pabpc1b10085.086Monopterus_albus
ENSMAMG00000004502-10099.519ENSMALG00000013020-9999.519Monopterus_albus
ENSMAMG00000004502-6880.838ENSNGAG00000012688-9878.571Nannospalax_galili
ENSMAMG00000004502-10098.798ENSNBRG00000003068-9998.798Neolamprologus_brichardi
ENSMAMG00000004502-10093.029ENSNBRG00000013737pabpc1b9993.029Neolamprologus_brichardi
ENSMAMG00000004502-6878.889ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSMAMG00000004502-6878.333ENSODEG00000018540-9879.592Octodon_degus
ENSMAMG00000004502-10093.029ENSONIG00000002717pabpc1b9993.029Oreochromis_niloticus
ENSMAMG00000004502-10099.038ENSONIG00000006871-9999.038Oreochromis_niloticus
ENSMAMG00000004502-6878.889ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSMAMG00000004502-10088.942ENSORLG00000003008-9988.942Oryzias_latipes
ENSMAMG00000004502-9998.571ENSORLG00000002691pabpc1a10096.850Oryzias_latipes
ENSMAMG00000004502-9988.702ENSORLG00020022259-9988.702Oryzias_latipes_hni
ENSMAMG00000004502-10097.008ENSORLG00020022398pabpc1a10097.008Oryzias_latipes_hni
ENSMAMG00000004502-10096.850ENSORLG00015013633pabpc110096.850Oryzias_latipes_hsok
ENSMAMG00000004502-10088.942ENSORLG00015010932-10084.301Oryzias_latipes_hsok
ENSMAMG00000004502-10097.795ENSOMEG00000020219pabpc1a10097.795Oryzias_melastigma
ENSMAMG00000004502-10082.659ENSOMEG00000013627pabpc1b10082.659Oryzias_melastigma
ENSMAMG00000004502-6878.889ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSMAMG00000004502-6878.889ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSMAMG00000004502-6878.889ENSOARG00000005943-9880.102Ovis_aries
ENSMAMG00000004502-6878.889ENSPPAG00000012920-9880.102Pan_paniscus
ENSMAMG00000004502-6878.889ENSPPRG00000011809-9880.102Panthera_pardus
ENSMAMG00000004502-6878.889ENSPPRG00000011804-9880.102Panthera_pardus
ENSMAMG00000004502-6878.889ENSPTRG00000028252-9880.102Pan_troglodytes
ENSMAMG00000004502-6878.889ENSPANG00000011549-9880.102Papio_anubis
ENSMAMG00000004502-10090.596ENSPKIG00000005676pabpc1b10089.812Paramormyrops_kingsleyae
ENSMAMG00000004502-8991.429ENSPMGG00000022487pabpc1a9297.978Periophthalmus_magnuspinnatus
ENSMAMG00000004502-8191.587ENSPMGG00000023134-9791.704Periophthalmus_magnuspinnatus
ENSMAMG00000004502-9976.376ENSPCIG00000016995-5576.376Phascolarctos_cinereus
ENSMAMG00000004502-10089.342ENSPFOG00000005917pabpc1b10089.498Poecilia_formosa
ENSMAMG00000004502-10096.291ENSPFOG00000010815pabpc1a10096.291Poecilia_formosa
ENSMAMG00000004502-10098.268ENSPLAG00000004114pabpc1a10098.268Poecilia_latipinna
ENSMAMG00000004502-10089.655ENSPLAG00000001388pabpc1b10089.812Poecilia_latipinna
ENSMAMG00000004502-10098.268ENSPMEG00000001334pabpc1a10098.268Poecilia_mexicana
ENSMAMG00000004502-10089.342ENSPMEG00000014399pabpc1b10089.498Poecilia_mexicana
ENSMAMG00000004502-10097.679ENSPREG00000019595pabpc1a10097.679Poecilia_reticulata
ENSMAMG00000004502-10089.655ENSPREG00000010911pabpc1b10089.812Poecilia_reticulata
ENSMAMG00000004502-6878.889ENSPPYG00000020468-9880.102Pongo_abelii
ENSMAMG00000004502-6878.889ENSPCAG00000005308-9880.102Procavia_capensis
ENSMAMG00000004502-6878.333ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSMAMG00000004502-6879.330ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSMAMG00000004502-10097.795ENSPNYG00000005192pabpc1a9998.798Pundamilia_nyererei
ENSMAMG00000004502-10092.788ENSPNYG00000012578pabpc1b9992.788Pundamilia_nyererei
ENSMAMG00000004502-10090.895ENSPNAG00000028408pabpc1a10090.581Pygocentrus_nattereri
ENSMAMG00000004502-10090.596ENSPNAG00000024626pabpc1b9990.433Pygocentrus_nattereri
ENSMAMG00000004502-6878.889ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSMAMG00000004502-9989.202ENSRBIG00000028738-9589.202Rhinopithecus_bieti
ENSMAMG00000004502-6878.889ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSMAMG00000004502-9772.289ENSSHAG00000000511-10072.289Sarcophilus_harrisii
ENSMAMG00000004502-10093.750ENSSFOG00015002752-9993.750Scleropages_formosus
ENSMAMG00000004502-8377.070ENSSFOG00015019668-8878.613Scleropages_formosus
ENSMAMG00000004502-10090.888ENSSFOG00015006662pabpc1a9990.888Scleropages_formosus
ENSMAMG00000004502-10088.401ENSSMAG00000006869pabpc1b10088.245Scophthalmus_maximus
ENSMAMG00000004502-10098.558ENSSMAG00000010803pabpc1a10097.953Scophthalmus_maximus
ENSMAMG00000004502-10098.425ENSSDUG00000006675pabpc1a10098.425Seriola_dumerili
ENSMAMG00000004502-10093.765ENSSDUG00000011965pabpc1b10088.088Seriola_dumerili
ENSMAMG00000004502-10089.891ENSSLDG00000014156pabpc1b10089.736Seriola_lalandi_dorsalis
ENSMAMG00000004502-10098.425ENSSLDG00000011661pabpc1a10098.425Seriola_lalandi_dorsalis
ENSMAMG00000004502-10090.160ENSSPAG00000019265pabpc1b10089.796Stegastes_partitus
ENSMAMG00000004502-10098.740ENSSPAG00000014453-10098.740Stegastes_partitus
ENSMAMG00000004502-6878.889ENSSSCG00000036336-9880.102Sus_scrofa
ENSMAMG00000004502-6878.889ENSSSCG00000032167-9880.102Sus_scrofa
ENSMAMG00000004502-10091.847ENSTRUG00000003767-9990.023Takifugu_rubripes
ENSMAMG00000004502-10094.954ENSTRUG00000011577-10095.126Takifugu_rubripes
ENSMAMG00000004502-10091.783ENSTNIG00000013307pabpc1a10092.248Tetraodon_nigroviridis
ENSMAMG00000004502-10087.054ENSTNIG00000009153pabpc1b10085.981Tetraodon_nigroviridis
ENSMAMG00000004502-6878.889ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSMAMG00000004502-6878.889ENSUAMG00000008089-9880.102Ursus_americanus
ENSMAMG00000004502-9760.965ENSUMAG00000023926-8969.890Ursus_maritimus
ENSMAMG00000004502-6878.889ENSUMAG00000003364-9880.102Ursus_maritimus
ENSMAMG00000004502-6878.333ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSMAMG00000004502-9745.814ENSXETG00000015439-9745.387Xenopus_tropicalis
ENSMAMG00000004502-10085.266ENSXCOG00000019901pabpc1b10085.110Xiphophorus_couchianus
ENSMAMG00000004502-10091.969ENSXCOG00000017066pabpc1a10091.969Xiphophorus_couchianus
ENSMAMG00000004502-10098.425ENSXMAG00000002555pabpc1a10098.425Xiphophorus_maculatus
ENSMAMG00000004502-10090.227ENSXMAG00000003753pabpc1b10089.812Xiphophorus_maculatus

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