EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000004524 (Gene tree)
Gene ID: 113137629
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA binding motif protein 25b
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 13859 bases
Position: chrOOHQ01000069.1:17643800-17657658
Accession: ZDB-GENE-030131-5547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006807	RRM_1	PF00076.22	3.3e-09	1	1
ENSMAMP00000006747	RRM_1	PF00076.22	3.4e-09	1	1
ENSMAMP00000006713	RRM_1	PF00076.22	3.6e-09	1	1
ENSMAMP00000006747	PWI	PF01480.17	3.2e-13	1	1
ENSMAMP00000006807	PWI	PF01480.17	3.3e-13	1	1
ENSMAMP00000006713	PWI	PF01480.17	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006899	-	6038	-	ENSMAMP00000006713	837 (aa)	-	-
ENSMAMT00000006933	-	2452	-	ENSMAMP00000006747	809 (aa)	-	-
ENSMAMT00000006993	-	2343	-	ENSMAMP00000006807	780 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000004524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000004524	rbm25b	53	74.651	ENSMAMG00000000165	rbm25a	60	67.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004524	rbm25b	58	75.155	ENSAPOG00000017757	rbm25a	61	73.469	Acanthochromis_polyacanthus
ENSMAMG00000004524	rbm25b	57	87.097	ENSACIG00000014178	rbm25b	57	88.273	Amphilophus_citrinellus
ENSMAMG00000004524	rbm25b	55	78.261	ENSACIG00000019482	rbm25a	57	76.891	Amphilophus_citrinellus
ENSMAMG00000004524	rbm25b	55	77.704	ENSAOCG00000013695	rbm25a	58	72.967	Amphiprion_ocellaris
ENSMAMG00000004524	rbm25b	57	75.934	ENSAOCG00000019308	rbm25b	57	81.637	Amphiprion_ocellaris
ENSMAMG00000004524	rbm25b	55	77.704	ENSAPEG00000007514	rbm25a	58	75.574	Amphiprion_percula
ENSMAMG00000004524	rbm25b	100	87.886	ENSAPEG00000009666	rbm25b	60	92.521	Amphiprion_percula
ENSMAMG00000004524	rbm25b	57	77.684	ENSATEG00000020676	rbm25a	63	76.022	Anabas_testudineus
ENSMAMG00000004524	rbm25b	58	92.094	ENSATEG00000017312	rbm25b	58	92.094	Anabas_testudineus
ENSMAMG00000004524	rbm25b	92	73.868	ENSACLG00000027482	rbm25a	90	71.398	Astatotilapia_calliptera
ENSMAMG00000004524	rbm25b	56	82.366	ENSACLG00000024359	rbm25b	51	78.759	Astatotilapia_calliptera
ENSMAMG00000004524	rbm25b	52	78.199	ENSAMXG00000024525	rbm25b	60	69.815	Astyanax_mexicanus
ENSMAMG00000004524	rbm25b	53	77.348	ENSCAPG00000005239	RBM25	77	77.966	Cavia_aperea
ENSMAMG00000004524	rbm25b	62	94.000	ENSCHOG00000008903	RBM25	60	95.652	Choloepus_hoffmanni
ENSMAMG00000004524	rbm25b	86	67.354	ENSCANG00000043874	RBM25	98	69.444	Colobus_angolensis_palliatus
ENSMAMG00000004524	rbm25b	63	62.069	ENSCGRG00001020817	Rbm25	100	65.047	Cricetulus_griseus_chok1gshd
ENSMAMG00000004524	rbm25b	100	87.160	ENSCSEG00000020737	rbm25b	55	78.076	Cynoglossus_semilaevis
ENSMAMG00000004524	rbm25b	100	86.700	ENSCVAG00000003478	rbm25b	58	85.201	Cyprinodon_variegatus
ENSMAMG00000004524	rbm25b	69	79.771	ENSCVAG00000005498	rbm25a	98	72.423	Cyprinodon_variegatus
ENSMAMG00000004524	rbm25b	63	77.567	ENSDARG00000006395	rbm25b	58	72.107	Danio_rerio
ENSMAMG00000004524	rbm25b	55	61.607	ENSDARG00000039266	rbm25a	99	92.405	Danio_rerio
ENSMAMG00000004524	rbm25b	72	38.240	ENSEBUG00000002963	rbm25b	67	38.724	Eptatretus_burgeri
ENSMAMG00000004524	rbm25b	84	74.020	ENSEEUG00000007350	RBM25	81	73.039	Erinaceus_europaeus
ENSMAMG00000004524	rbm25b	100	78.795	ENSELUG00000007730	rbm25b	59	85.657	Esox_lucius
ENSMAMG00000004524	rbm25b	54	68.360	ENSELUG00000021847	rbm25a	54	67.421	Esox_lucius
ENSMAMG00000004524	rbm25b	57	88.960	ENSFHEG00000003513	rbm25b	58	87.553	Fundulus_heteroclitus
ENSMAMG00000004524	rbm25b	56	70.065	ENSFHEG00000005318	rbm25a	57	82.258	Fundulus_heteroclitus
ENSMAMG00000004524	rbm25b	96	60.150	ENSGMOG00000014097	rbm25b	63	80.000	Gadus_morhua
ENSMAMG00000004524	rbm25b	81	72.532	ENSGMOG00000014070	rbm25a	87	72.609	Gadus_morhua
ENSMAMG00000004524	rbm25b	98	86.173	ENSGAFG00000001092	rbm25b	52	88.636	Gambusia_affinis
ENSMAMG00000004524	rbm25b	100	71.566	ENSGAFG00000018036	rbm25a	52	82.661	Gambusia_affinis
ENSMAMG00000004524	rbm25b	60	73.868	ENSHBUG00000016908	rbm25a	58	77.035	Haplochromis_burtoni
ENSMAMG00000004524	rbm25b	100	80.075	ENSHCOG00000000142	rbm25b	57	78.681	Hippocampus_comes
ENSMAMG00000004524	rbm25b	56	90.351	ENSKMAG00000018826	rbm25b	58	90.832	Kryptolebias_marmoratus
ENSMAMG00000004524	rbm25b	60	72.600	ENSKMAG00000016242	rbm25a	59	81.781	Kryptolebias_marmoratus
ENSMAMG00000004524	rbm25b	100	89.889	ENSLBEG00000010667	rbm25b	56	84.187	Labrus_bergylta
ENSMAMG00000004524	rbm25b	57	73.230	ENSLACG00000011845	RBM25	56	72.113	Latimeria_chalumnae
ENSMAMG00000004524	rbm25b	60	73.868	ENSMZEG00005011183	rbm25a	58	77.035	Maylandia_zebra
ENSMAMG00000004524	rbm25b	54	74.943	ENSMGAG00000011707	RBM25	54	72.271	Meleagris_gallopavo
ENSMAMG00000004524	rbm25b	57	76.068	ENSMMOG00000009065	rbm25a	57	74.207	Mola_mola
ENSMAMG00000004524	rbm25b	58	92.243	ENSMALG00000020441	rbm25b	90	93.856	Monopterus_albus
ENSMAMG00000004524	rbm25b	52	74.818	MGP_SPRETEiJ_G0018766	-	94	74.863	Mus_spretus
ENSMAMG00000004524	rbm25b	51	70.146	ENSMLUG00000024167	-	53	67.591	Myotis_lucifugus
ENSMAMG00000004524	rbm25b	55	78.097	ENSNBRG00000003761	rbm25a	58	77.035	Neolamprologus_brichardi
ENSMAMG00000004524	rbm25b	100	64.202	ENSOCUG00000013737	RBM25	64	79.508	Oryctolagus_cuniculus
ENSMAMG00000004524	rbm25b	57	88.009	ENSORLG00000011874	rbm25b	58	87.261	Oryzias_latipes
ENSMAMG00000004524	rbm25b	57	88.223	ENSORLG00020016422	rbm25b	58	87.473	Oryzias_latipes_hni
ENSMAMG00000004524	rbm25b	71	68.015	ENSORLG00015022499	rbm25a	54	63.104	Oryzias_latipes_hsok
ENSMAMG00000004524	rbm25b	57	88.223	ENSORLG00015011269	rbm25b	58	87.473	Oryzias_latipes_hsok
ENSMAMG00000004524	rbm25b	84	67.920	ENSOMEG00000022138	rbm25a	59	70.766	Oryzias_melastigma
ENSMAMG00000004524	rbm25b	57	87.580	ENSOMEG00000023172	rbm25b	58	87.261	Oryzias_melastigma
ENSMAMG00000004524	rbm25b	100	85.995	ENSPMGG00000015740	rbm25b	59	86.316	Periophthalmus_magnuspinnatus
ENSMAMG00000004524	rbm25b	53	64.403	ENSPMGG00000001791	rbm25a	100	65.133	Periophthalmus_magnuspinnatus
ENSMAMG00000004524	rbm25b	57	87.029	ENSPFOG00000018808	rbm25b	59	88.636	Poecilia_formosa
ENSMAMG00000004524	rbm25b	100	72.859	ENSPLAG00000018338	rbm25a	58	83.871	Poecilia_latipinna
ENSMAMG00000004524	rbm25b	57	86.820	ENSPMEG00000019161	rbm25b	59	88.430	Poecilia_mexicana
ENSMAMG00000004524	rbm25b	100	72.859	ENSPMEG00000024470	rbm25a	57	83.871	Poecilia_mexicana
ENSMAMG00000004524	rbm25b	55	77.483	ENSPREG00000009228	rbm25a	58	83.871	Poecilia_reticulata
ENSMAMG00000004524	rbm25b	57	86.458	ENSPREG00000008522	rbm25b	59	87.216	Poecilia_reticulata
ENSMAMG00000004524	rbm25b	80	74.757	ENSPCAG00000006226	RBM25	80	72.414	Procavia_capensis
ENSMAMG00000004524	rbm25b	60	73.868	ENSPNYG00000022596	rbm25a	58	71.398	Pundamilia_nyererei
ENSMAMG00000004524	rbm25b	62	79.832	ENSSBOG00000034153	RBM25	56	56.136	Saimiri_boliviensis_boliviensis
ENSMAMG00000004524	rbm25b	57	76.681	ENSSFOG00015007093	rbm25	58	74.844	Scleropages_formosus
ENSMAMG00000004524	rbm25b	57	77.590	ENSSMAG00000009745	rbm25a	58	75.365	Scophthalmus_maximus
ENSMAMG00000004524	rbm25b	100	87.975	ENSSMAG00000002520	rbm25b	58	86.469	Scophthalmus_maximus
ENSMAMG00000004524	rbm25b	55	79.736	ENSSDUG00000017984	rbm25a	58	78.361	Seriola_dumerili
ENSMAMG00000004524	rbm25b	55	79.736	ENSSLDG00000010342	rbm25a	57	78.361	Seriola_lalandi_dorsalis
ENSMAMG00000004524	rbm25b	100	91.400	ENSSLDG00000024573	rbm25b	99	95.614	Seriola_lalandi_dorsalis
ENSMAMG00000004524	rbm25b	55	76.483	ENSSPAG00000011114	rbm25a	58	75.309	Stegastes_partitus
ENSMAMG00000004524	rbm25b	57	72.363	ENSTRUG00000003076	rbm25a	60	70.127	Takifugu_rubripes
ENSMAMG00000004524	rbm25b	58	89.722	ENSTRUG00000017964	rbm25b	58	90.792	Takifugu_rubripes
ENSMAMG00000004524	rbm25b	96	77.076	ENSTNIG00000012222	rbm25b	70	84.382	Tetraodon_nigroviridis
ENSMAMG00000004524	rbm25b	70	78.641	ENSTBEG00000010538	-	64	78.641	Tupaia_belangeri
ENSMAMG00000004524	rbm25b	86	67.511	ENSVPAG00000009052	RBM25	80	71.175	Vicugna_pacos
ENSMAMG00000004524	rbm25b	96	64.213	ENSXETG00000021857	rbm25	56	72.495	Xenopus_tropicalis
ENSMAMG00000004524	rbm25b	100	71.856	ENSXCOG00000004043	RBM25	58	72.336	Xiphophorus_couchianus
ENSMAMG00000004524	rbm25b	100	68.921	ENSXMAG00000009077	RBM25	58	82.661	Xiphophorus_maculatus
ENSMAMG00000004524	rbm25b	100	86.594	ENSXMAG00000017290	rbm25b	59	86.831	Xiphophorus_maculatus