EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000004556 (Gene tree)
Gene ID: 113140892
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 9202 bases
Position: chrOOHQ01000092.1:3567294-3576495
Accession: 113140892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006686	RRM_1	PF00076.22	3.2e-18	1	1
ENSMAMP00000006686	U1snRNP70_N	PF12220.8	8.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000006871	-	1423	-	ENSMAMP00000006686	471 (aa)	XP_026180778	UPI000E45E296

Gene Model

Click here to download ENSMAMG00000004556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004556	snrnp70	100	89.619	ENSACIG00000017909	snrnp70	100	89.407	Amphilophus_citrinellus
ENSMAMG00000004556	snrnp70	100	86.402	ENSAOCG00000011672	snrnp70	100	86.611	Amphiprion_ocellaris
ENSMAMG00000004556	snrnp70	100	83.932	ENSAPEG00000006219	snrnp70	100	82.180	Amphiprion_percula
ENSMAMG00000004556	snrnp70	100	80.962	ENSACLG00000011144	snrnp70	100	77.824	Astatotilapia_calliptera
ENSMAMG00000004556	snrnp70	53	48.996	WBGene00004390	rnp-7	57	51.053	Caenorhabditis_elegans
ENSMAMG00000004556	snrnp70	100	77.070	ENSFHEG00000010298	snrnp70	100	77.070	Fundulus_heteroclitus
ENSMAMG00000004556	snrnp70	100	80.892	ENSGAFG00000003395	snrnp70	100	75.796	Gambusia_affinis
ENSMAMG00000004556	snrnp70	100	85.805	ENSHBUG00000018856	snrnp70	100	86.653	Haplochromis_burtoni
ENSMAMG00000004556	snrnp70	100	74.262	ENSHCOG00000010270	snrnp70	100	78.481	Hippocampus_comes
ENSMAMG00000004556	snrnp70	100	85.169	ENSMZEG00005022849	snrnp70	100	86.441	Maylandia_zebra
ENSMAMG00000004556	snrnp70	73	92.754	ENSMALG00000002275	snrnp70	90	90.393	Monopterus_albus
ENSMAMG00000004556	snrnp70	100	80.421	ENSORLG00000017158	snrnp70	100	80.842	Oryzias_latipes
ENSMAMG00000004556	snrnp70	100	80.632	ENSORLG00015010817	snrnp70	100	80.842	Oryzias_latipes_hsok
ENSMAMG00000004556	snrnp70	100	83.652	ENSOMEG00000013002	snrnp70	100	84.501	Oryzias_melastigma
ENSMAMG00000004556	snrnp70	57	81.716	ENSPPAG00000035067	SNRNP70	99	89.024	Pan_paniscus
ENSMAMG00000004556	snrnp70	100	82.590	ENSPFOG00000016671	snrnp70	100	77.495	Poecilia_formosa
ENSMAMG00000004556	snrnp70	100	82.378	ENSPLAG00000005912	snrnp70	100	77.282	Poecilia_latipinna
ENSMAMG00000004556	snrnp70	100	82.590	ENSPMEG00000008496	snrnp70	100	77.495	Poecilia_mexicana
ENSMAMG00000004556	snrnp70	100	82.590	ENSPREG00000005486	snrnp70	100	77.282	Poecilia_reticulata
ENSMAMG00000004556	snrnp70	56	74.812	ENSPCOG00000023103	SNRNP70	89	74.812	Propithecus_coquereli
ENSMAMG00000004556	snrnp70	100	86.017	ENSPNYG00000003258	snrnp70	100	86.864	Pundamilia_nyererei
ENSMAMG00000004556	snrnp70	52	86.400	ENSSPUG00000016621	SNRNP70	52	92.342	Sphenodon_punctatus
ENSMAMG00000004556	snrnp70	100	77.707	ENSTRUG00000009202	snrnp70	100	81.104	Takifugu_rubripes