EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000004715 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4886 bases
Position: chrOOHQ01000107.1:4470187-4475072
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006919	RRM_5	PF13893.6	5.7e-12	1	2
ENSMAMP00000006919	RRM_5	PF13893.6	5.7e-12	2	2
ENSMAMP00000006919	RRM_1	PF00076.22	1.4e-28	1	2
ENSMAMP00000006919	RRM_1	PF00076.22	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000007108	-	3909	-	ENSMAMP00000006919	414 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000004715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000004715	-	65	58.268	ENSMAMG00000001765	rbm4.1	61	59.821
ENSMAMG00000004715	-	81	70.238	ENSMAMG00000004701	rbm4.3	96	70.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004715	-	84	92.529	ENSAPOG00000002953	rbm4.3	100	92.816	Acanthochromis_polyacanthus
ENSMAMG00000004715	-	81	70.623	ENSAPOG00000002991	rbm4.3	96	68.843	Acanthochromis_polyacanthus
ENSMAMG00000004715	-	84	88.761	ENSACIG00000021311	-	100	89.049	Amphilophus_citrinellus
ENSMAMG00000004715	-	81	70.833	ENSACIG00000021295	rbm4.3	96	69.345	Amphilophus_citrinellus
ENSMAMG00000004715	-	84	94.509	ENSAOCG00000008015	rbm4.3	100	94.509	Amphiprion_ocellaris
ENSMAMG00000004715	-	81	70.326	ENSAOCG00000007992	rbm4.3	96	68.546	Amphiprion_ocellaris
ENSMAMG00000004715	-	81	70.623	ENSAPEG00000017288	rbm4.3	96	68.843	Amphiprion_percula
ENSMAMG00000004715	-	84	93.931	ENSAPEG00000017324	rbm4.3	100	92.197	Amphiprion_percula
ENSMAMG00000004715	-	84	98.266	ENSATEG00000019375	rbm4.3	100	98.266	Anabas_testudineus
ENSMAMG00000004715	-	81	71.217	ENSATEG00000019395	rbm4.3	96	71.217	Anabas_testudineus
ENSMAMG00000004715	-	84	70.085	ENSACLG00000010642	rbm4.3	99	69.429	Astatotilapia_calliptera
ENSMAMG00000004715	-	84	87.896	ENSACLG00000010620	-	100	88.184	Astatotilapia_calliptera
ENSMAMG00000004715	-	51	75.829	ENSAMXG00000040224	rbm4.3	82	73.529	Astyanax_mexicanus
ENSMAMG00000004715	-	84	84.527	ENSCSEG00000013659	rbm4.3	100	83.381	Cynoglossus_semilaevis
ENSMAMG00000004715	-	83	66.667	ENSCVAG00000008502	rbm4.3	99	67.529	Cyprinodon_variegatus
ENSMAMG00000004715	-	84	77.493	ENSCVAG00000008508	rbm4.3	100	78.348	Cyprinodon_variegatus
ENSMAMG00000004715	-	80	73.294	ENSDARG00000022129	rbm4.3	97	72.353	Danio_rerio
ENSMAMG00000004715	-	84	71.671	ENSELUG00000022168	rbm4.3	100	71.875	Esox_lucius
ENSMAMG00000004715	-	83	78.736	ENSELUG00000022155	rbm4.3	99	78.736	Esox_lucius
ENSMAMG00000004715	-	83	76.218	ENSELUG00000022150	rbm4.3	97	76.176	Esox_lucius
ENSMAMG00000004715	-	67	81.004	ENSFHEG00000023137	rbm4.3	84	81.852	Fundulus_heteroclitus
ENSMAMG00000004715	-	84	64.103	ENSGAFG00000001935	rbm4.3	100	62.857	Gambusia_affinis
ENSMAMG00000004715	-	79	88.966	ENSGACG00000019980	rbm4.3	77	88.966	Gasterosteus_aculeatus
ENSMAMG00000004715	-	83	70.286	ENSHBUG00000009051	rbm4.3	99	69.714	Haplochromis_burtoni
ENSMAMG00000004715	-	84	87.896	ENSHBUG00000009020	-	100	88.184	Haplochromis_burtoni
ENSMAMG00000004715	-	80	73.874	ENSHCOG00000010349	rbm4.3	100	73.580	Hippocampus_comes
ENSMAMG00000004715	-	81	69.412	ENSIPUG00000022943	RBM4B	100	69.801	Ictalurus_punctatus
ENSMAMG00000004715	-	84	73.429	ENSKMAG00000017468	rbm4.3	100	72.000	Kryptolebias_marmoratus
ENSMAMG00000004715	-	84	92.219	ENSLBEG00000001071	-	100	93.372	Labrus_bergylta
ENSMAMG00000004715	-	80	63.435	ENSLOCG00000002755	rbm4.3	100	63.228	Lepisosteus_oculatus
ENSMAMG00000004715	-	72	71.141	ENSMZEG00005007441	rbm4.3	79	69.128	Maylandia_zebra
ENSMAMG00000004715	-	71	81.017	ENSMZEG00005028537	-	85	80.464	Maylandia_zebra
ENSMAMG00000004715	-	84	70.085	ENSMZEG00005028540	rbm4.3	99	69.429	Maylandia_zebra
ENSMAMG00000004715	-	84	83.862	ENSMZEG00005007417	-	100	84.150	Maylandia_zebra
ENSMAMG00000004715	-	81	66.372	ENSMMOG00000012191	rbm4.3	96	64.793	Mola_mola
ENSMAMG00000004715	-	81	69.254	ENSMALG00000015014	-	96	67.164	Monopterus_albus
ENSMAMG00000004715	-	76	69.841	ENSMALG00000003032	rbm4.3	95	67.619	Monopterus_albus
ENSMAMG00000004715	-	73	95.098	ENSMALG00000003001	rbm4.3	87	97.627	Monopterus_albus
ENSMAMG00000004715	-	81	69.436	ENSNBRG00000012372	rbm4.3	96	67.656	Neolamprologus_brichardi
ENSMAMG00000004715	-	81	69.412	ENSONIG00000018378	rbm4.3	96	67.941	Oreochromis_niloticus
ENSMAMG00000004715	-	84	87.896	ENSONIG00000018380	-	100	88.184	Oreochromis_niloticus
ENSMAMG00000004715	-	84	77.437	ENSORLG00000011589	rbm4.3	100	74.930	Oryzias_latipes
ENSMAMG00000004715	-	81	61.194	ENSORLG00000024749	rbm4.3	95	56.548	Oryzias_latipes
ENSMAMG00000004715	-	84	73.816	ENSORLG00000012473	rbm4.3	100	71.866	Oryzias_latipes
ENSMAMG00000004715	-	84	77.159	ENSORLG00020012474	rbm4.3	100	74.930	Oryzias_latipes_hni
ENSMAMG00000004715	-	83	62.139	ENSORLG00020012482	rbm4.3	99	57.637	Oryzias_latipes_hni
ENSMAMG00000004715	-	84	73.816	ENSORLG00020012464	rbm4.3	100	71.866	Oryzias_latipes_hni
ENSMAMG00000004715	-	84	73.816	ENSORLG00015013686	rbm4.3	100	71.866	Oryzias_latipes_hsok
ENSMAMG00000004715	-	81	61.721	ENSORLG00015013721	rbm4.3	99	57.759	Oryzias_latipes_hsok
ENSMAMG00000004715	-	84	75.766	ENSORLG00015013698	rbm4.3	100	75.209	Oryzias_latipes_hsok
ENSMAMG00000004715	-	81	74.713	ENSOMEG00000005929	rbm4.3	100	73.611	Oryzias_melastigma
ENSMAMG00000004715	-	84	72.905	ENSOMEG00000005918	rbm4.3	100	72.067	Oryzias_melastigma
ENSMAMG00000004715	-	79	72.508	ENSPKIG00000007001	rbm4.3	100	71.347	Paramormyrops_kingsleyae
ENSMAMG00000004715	-	83	65.527	ENSPLAG00000006077	rbm4.3	99	64.672	Poecilia_latipinna
ENSMAMG00000004715	-	84	76.353	ENSPLAG00000006131	rbm4.3	100	77.493	Poecilia_latipinna
ENSMAMG00000004715	-	83	66.000	ENSPMEG00000024260	rbm4.3	99	65.429	Poecilia_mexicana
ENSMAMG00000004715	-	84	75.214	ENSPMEG00000024263	rbm4.3	100	78.348	Poecilia_mexicana
ENSMAMG00000004715	-	84	76.353	ENSPMEG00000024271	rbm4.3	100	77.208	Poecilia_mexicana
ENSMAMG00000004715	-	84	73.199	ENSPREG00000002156	rbm4.3	100	74.640	Poecilia_reticulata
ENSMAMG00000004715	-	83	65.537	ENSPREG00000002093	-	99	66.000	Poecilia_reticulata
ENSMAMG00000004715	-	83	69.714	ENSPNYG00000018564	rbm4.3	99	69.429	Pundamilia_nyererei
ENSMAMG00000004715	-	84	87.896	ENSPNYG00000018541	rbm4.3	100	88.184	Pundamilia_nyererei
ENSMAMG00000004715	-	84	70.914	ENSPNAG00000013053	rbm4.3	100	70.670	Pygocentrus_nattereri
ENSMAMG00000004715	-	84	68.144	ENSSFOG00015015563	rbm4.3	100	68.144	Scleropages_formosus
ENSMAMG00000004715	-	84	92.197	ENSSMAG00000013644	rbm4.3	100	92.197	Scophthalmus_maximus
ENSMAMG00000004715	-	81	67.761	ENSSMAG00000013653	rbm4.3	96	68.955	Scophthalmus_maximus
ENSMAMG00000004715	-	81	71.598	ENSSDUG00000018422	rbm4.3	96	68.935	Seriola_dumerili
ENSMAMG00000004715	-	84	98.266	ENSSDUG00000018435	rbm4.3	100	98.266	Seriola_dumerili
ENSMAMG00000004715	-	81	70.920	ENSSLDG00000017182	rbm4.3	96	68.249	Seriola_lalandi_dorsalis
ENSMAMG00000004715	-	84	98.266	ENSSLDG00000017204	rbm4.3	100	98.266	Seriola_lalandi_dorsalis
ENSMAMG00000004715	-	84	92.197	ENSSPAG00000008062	rbm4.3	100	92.197	Stegastes_partitus
ENSMAMG00000004715	-	84	69.741	ENSSPAG00000008041	rbm4.3	83	66.181	Stegastes_partitus
ENSMAMG00000004715	-	81	64.201	ENSTRUG00000023874	rbm4.3	96	65.782	Takifugu_rubripes
ENSMAMG00000004715	-	84	87.931	ENSTRUG00000020901	rbm4.3	100	86.782	Takifugu_rubripes
ENSMAMG00000004715	-	84	86.127	ENSTNIG00000005668	rbm4.3	100	86.127	Tetraodon_nigroviridis
ENSMAMG00000004715	-	81	65.882	ENSXCOG00000005996	rbm4.3	97	66.372	Xiphophorus_couchianus
ENSMAMG00000004715	-	84	76.353	ENSXCOG00000006001	rbm4.3	100	77.208	Xiphophorus_couchianus
ENSMAMG00000004715	-	81	65.789	ENSXMAG00000025173	rbm4.3	99	65.903	Xiphophorus_maculatus
ENSMAMG00000004715	-	84	76.353	ENSXMAG00000021997	rbm4.3	100	77.208	Xiphophorus_maculatus
ENSMAMG00000004715	-	84	76.638	ENSXMAG00000011698	rbm4.3	100	77.493	Xiphophorus_maculatus