EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000004717 (Gene tree)
Gene ID: 113142014
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3716 bases
Position: chrOOHQ01000056.1:5724553-5728268
Accession: 113142014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006935	tRNA_Me_trans	PF03054.16	1.9e-134	1	1
ENSMAMP00000006923	tRNA_Me_trans	PF03054.16	8e-127	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000007112	-	2239	-	ENSMAMP00000006923	385 (aa)	-	-
ENSMAMT00000007125	-	2116	XM_026326740	ENSMAMP00000006935	416 (aa)	XP_026182525	UPI000E45EA2F

Gene Model

Click here to download ENSMAMG00000004717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004717's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004717	trmu	99	69.976	ENSG00000100416	TRMU	99	78.571	Homo_sapiens
ENSMAMG00000004717	trmu	100	87.050	ENSAPOG00000014458	trmu	100	87.050	Acanthochromis_polyacanthus
ENSMAMG00000004717	trmu	96	69.576	ENSAMEG00000003319	TRMU	96	69.576	Ailuropoda_melanoleuca
ENSMAMG00000004717	trmu	100	85.337	ENSACIG00000002101	trmu	100	85.337	Amphilophus_citrinellus
ENSMAMG00000004717	trmu	100	87.530	ENSAOCG00000013155	trmu	100	87.530	Amphiprion_ocellaris
ENSMAMG00000004717	trmu	100	87.290	ENSAPEG00000013350	trmu	100	87.290	Amphiprion_percula
ENSMAMG00000004717	trmu	100	85.817	ENSATEG00000007814	trmu	100	85.817	Anabas_testudineus
ENSMAMG00000004717	trmu	94	71.465	ENSAPLG00000016380	TRMU	99	71.465	Anas_platyrhynchos
ENSMAMG00000004717	trmu	95	71.392	ENSACAG00000007720	TRMU	95	71.392	Anolis_carolinensis
ENSMAMG00000004717	trmu	99	68.990	ENSANAG00000038053	TRMU	99	68.990	Aotus_nancymaae
ENSMAMG00000004717	trmu	100	86.058	ENSACLG00000005395	trmu	100	86.058	Astatotilapia_calliptera
ENSMAMG00000004717	trmu	98	78.484	ENSAMXG00000005282	trmu	99	78.484	Astyanax_mexicanus
ENSMAMG00000004717	trmu	99	68.932	ENSBTAG00000005595	TRMU	99	68.932	Bos_taurus
ENSMAMG00000004717	trmu	94	41.509	WBGene00007114	mttu-1	98	41.538	Caenorhabditis_elegans
ENSMAMG00000004717	trmu	99	67.711	ENSCJAG00000000198	TRMU	99	67.711	Callithrix_jacchus
ENSMAMG00000004717	trmu	97	69.630	ENSCAFG00000000779	TRMU	94	70.677	Canis_familiaris
ENSMAMG00000004717	trmu	97	69.630	ENSCAFG00020009184	TRMU	94	70.677	Canis_lupus_dingo
ENSMAMG00000004717	trmu	99	68.447	ENSCHIG00000017074	TRMU	99	68.447	Capra_hircus
ENSMAMG00000004717	trmu	97	71.642	ENSTSYG00000003853	TRMU	95	71.642	Carlito_syrichta
ENSMAMG00000004717	trmu	94	65.770	ENSCAPG00000013034	TRMU	96	65.770	Cavia_aperea
ENSMAMG00000004717	trmu	99	68.434	ENSCPOG00000020780	TRMU	99	68.434	Cavia_porcellus
ENSMAMG00000004717	trmu	99	66.988	ENSCCAG00000021641	TRMU	99	66.988	Cebus_capucinus
ENSMAMG00000004717	trmu	96	71.250	ENSCATG00000032800	TRMU	95	71.250	Cercocebus_atys
ENSMAMG00000004717	trmu	99	68.675	ENSCLAG00000017269	TRMU	99	68.675	Chinchilla_lanigera
ENSMAMG00000004717	trmu	99	69.976	ENSCSAG00000005279	TRMU	98	69.976	Chlorocebus_sabaeus
ENSMAMG00000004717	trmu	94	70.844	ENSCPBG00000011621	TRMU	98	70.844	Chrysemys_picta_bellii
ENSMAMG00000004717	trmu	96	46.535	ENSCING00000019371	-	99	46.535	Ciona_intestinalis
ENSMAMG00000004717	trmu	99	69.734	ENSCANG00000041645	TRMU	98	69.734	Colobus_angolensis_palliatus
ENSMAMG00000004717	trmu	99	68.204	ENSCGRG00001001739	Trmu	98	68.204	Cricetulus_griseus_chok1gshd
ENSMAMG00000004717	trmu	99	63.350	ENSCGRG00000002781	Trmu	98	63.350	Cricetulus_griseus_crigri
ENSMAMG00000004717	trmu	99	79.952	ENSCSEG00000012382	trmu	99	79.952	Cynoglossus_semilaevis
ENSMAMG00000004717	trmu	100	85.096	ENSCVAG00000001366	trmu	100	85.096	Cyprinodon_variegatus
ENSMAMG00000004717	trmu	100	74.038	ENSDARG00000043734	trmu	100	74.038	Danio_rerio
ENSMAMG00000004717	trmu	62	58.462	ENSDNOG00000047245	-	92	58.238	Dasypus_novemcinctus
ENSMAMG00000004717	trmu	97	70.223	ENSDORG00000007455	Trmu	98	70.223	Dipodomys_ordii
ENSMAMG00000004717	trmu	95	44.932	FBgn0040337	CG3021	95	44.819	Drosophila_melanogaster
ENSMAMG00000004717	trmu	50	74.576	ENSETEG00000009394	-	66	74.576	Echinops_telfairi
ENSMAMG00000004717	trmu	95	56.784	ENSEBUG00000007454	trmu	99	56.851	Eptatretus_burgeri
ENSMAMG00000004717	trmu	97	70.370	ENSEASG00005021725	TRMU	96	70.370	Equus_asinus_asinus
ENSMAMG00000004717	trmu	97	70.370	ENSECAG00000000467	TRMU	96	70.370	Equus_caballus
ENSMAMG00000004717	trmu	69	52.448	ENSEEUG00000000074	-	68	52.448	Erinaceus_europaeus
ENSMAMG00000004717	trmu	100	79.475	ENSELUG00000009464	trmu	99	82.065	Esox_lucius
ENSMAMG00000004717	trmu	96	71.679	ENSFCAG00000006533	TRMU	95	71.679	Felis_catus
ENSMAMG00000004717	trmu	89	72.895	ENSFALG00000010035	TRMU	96	72.895	Ficedula_albicollis
ENSMAMG00000004717	trmu	93	67.700	ENSFDAG00000017472	TRMU	98	67.700	Fukomys_damarensis
ENSMAMG00000004717	trmu	100	83.894	ENSFHEG00000003162	trmu	98	86.413	Fundulus_heteroclitus
ENSMAMG00000004717	trmu	97	73.892	ENSGMOG00000001323	trmu	99	73.892	Gadus_morhua
ENSMAMG00000004717	trmu	95	73.956	ENSGALG00000031922	TRMU	96	73.956	Gallus_gallus
ENSMAMG00000004717	trmu	98	85.330	ENSGAFG00000013331	trmu	98	85.330	Gambusia_affinis
ENSMAMG00000004717	trmu	100	83.924	ENSGACG00000019024	trmu	100	83.924	Gasterosteus_aculeatus
ENSMAMG00000004717	trmu	99	69.734	ENSGGOG00000000203	TRMU	98	69.734	Gorilla_gorilla
ENSMAMG00000004717	trmu	100	85.577	ENSHBUG00000023421	trmu	100	85.577	Haplochromis_burtoni
ENSMAMG00000004717	trmu	100	67.308	ENSHGLG00000009278	TRMU	99	67.308	Heterocephalus_glaber_female
ENSMAMG00000004717	trmu	100	67.308	ENSHGLG00100018863	TRMU	99	67.308	Heterocephalus_glaber_male
ENSMAMG00000004717	trmu	99	84.783	ENSHCOG00000013459	trmu	99	84.783	Hippocampus_comes
ENSMAMG00000004717	trmu	96	79.699	ENSIPUG00000009785	trmu	98	79.699	Ictalurus_punctatus
ENSMAMG00000004717	trmu	99	68.193	ENSSTOG00000010993	TRMU	99	68.193	Ictidomys_tridecemlineatus
ENSMAMG00000004717	trmu	97	68.642	ENSJJAG00000000667	Trmu	97	68.642	Jaculus_jaculus
ENSMAMG00000004717	trmu	100	84.615	ENSKMAG00000008516	trmu	100	84.615	Kryptolebias_marmoratus
ENSMAMG00000004717	trmu	100	85.096	ENSLBEG00000018831	trmu	100	85.096	Labrus_bergylta
ENSMAMG00000004717	trmu	99	74.279	ENSLACG00000013713	TRMU	99	74.279	Latimeria_chalumnae
ENSMAMG00000004717	trmu	96	79.950	ENSLOCG00000016066	trmu	95	79.950	Lepisosteus_oculatus
ENSMAMG00000004717	trmu	99	60.048	ENSLAFG00000005129	TRMU	99	60.048	Loxodonta_africana
ENSMAMG00000004717	trmu	99	70.218	ENSMFAG00000039767	TRMU	98	70.218	Macaca_fascicularis
ENSMAMG00000004717	trmu	99	70.218	ENSMMUG00000000807	TRMU	98	70.218	Macaca_mulatta
ENSMAMG00000004717	trmu	99	70.218	ENSMNEG00000028164	TRMU	98	70.218	Macaca_nemestrina
ENSMAMG00000004717	trmu	96	71.250	ENSMLEG00000033884	TRMU	95	71.250	Mandrillus_leucophaeus
ENSMAMG00000004717	trmu	100	86.058	ENSMZEG00005015797	trmu	100	86.058	Maylandia_zebra
ENSMAMG00000004717	trmu	77	72.424	ENSMGAG00000007550	TRMU	96	72.424	Meleagris_gallopavo
ENSMAMG00000004717	trmu	96	69.173	ENSMAUG00000022282	Trmu	96	69.173	Mesocricetus_auratus
ENSMAMG00000004717	trmu	96	69.825	ENSMICG00000029046	TRMU	97	69.825	Microcebus_murinus
ENSMAMG00000004717	trmu	96	69.674	ENSMOCG00000014641	Trmu	96	69.674	Microtus_ochrogaster
ENSMAMG00000004717	trmu	100	82.452	ENSMMOG00000007229	trmu	100	82.452	Mola_mola
ENSMAMG00000004717	trmu	98	66.019	ENSMODG00000007433	TRMU	96	66.019	Monodelphis_domestica
ENSMAMG00000004717	trmu	100	86.779	ENSMALG00000007721	trmu	100	86.779	Monopterus_albus
ENSMAMG00000004717	trmu	96	69.674	MGP_CAROLIEiJ_G0020134	Trmu	96	69.674	Mus_caroli
ENSMAMG00000004717	trmu	99	68.689	ENSMUSG00000022386	Trmu	99	68.689	Mus_musculus
ENSMAMG00000004717	trmu	99	68.447	MGP_PahariEiJ_G0020139	Trmu	99	68.447	Mus_pahari
ENSMAMG00000004717	trmu	99	68.689	MGP_SPRETEiJ_G0021031	Trmu	99	68.689	Mus_spretus
ENSMAMG00000004717	trmu	99	67.952	ENSMPUG00000002523	TRMU	99	67.952	Mustela_putorius_furo
ENSMAMG00000004717	trmu	99	68.116	ENSNGAG00000005132	Trmu	99	68.116	Nannospalax_galili
ENSMAMG00000004717	trmu	100	85.577	ENSNBRG00000022690	trmu	100	85.577	Neolamprologus_brichardi
ENSMAMG00000004717	trmu	99	69.734	ENSNLEG00000015773	TRMU	98	69.734	Nomascus_leucogenys
ENSMAMG00000004717	trmu	85	58.537	ENSMEUG00000000216	TRMU	99	58.537	Notamacropus_eugenii
ENSMAMG00000004717	trmu	99	67.952	ENSODEG00000014745	TRMU	99	67.952	Octodon_degus
ENSMAMG00000004717	trmu	100	86.058	ENSONIG00000009821	trmu	100	86.058	Oreochromis_niloticus
ENSMAMG00000004717	trmu	93	65.039	ENSOANG00000001891	TRMU	98	65.039	Ornithorhynchus_anatinus
ENSMAMG00000004717	trmu	90	69.973	ENSOCUG00000003664	TRMU	94	68.798	Oryctolagus_cuniculus
ENSMAMG00000004717	trmu	99	79.903	ENSORLG00000019015	trmu	99	79.903	Oryzias_latipes
ENSMAMG00000004717	trmu	99	80.387	ENSORLG00020006830	trmu	99	80.387	Oryzias_latipes_hni
ENSMAMG00000004717	trmu	99	80.387	ENSORLG00015003907	trmu	99	80.387	Oryzias_latipes_hsok
ENSMAMG00000004717	trmu	55	82.969	ENSOMEG00000015541	trmu	83	82.969	Oryzias_melastigma
ENSMAMG00000004717	trmu	96	69.500	ENSOGAG00000008096	TRMU	96	69.500	Otolemur_garnettii
ENSMAMG00000004717	trmu	97	68.097	ENSOARG00000019475	TRMU	93	67.632	Ovis_aries
ENSMAMG00000004717	trmu	99	70.218	ENSPPAG00000033944	TRMU	98	70.218	Pan_paniscus
ENSMAMG00000004717	trmu	96	71.429	ENSPPRG00000004197	TRMU	95	71.429	Panthera_pardus
ENSMAMG00000004717	trmu	72	71.841	ENSPTIG00000014122	TRMU	97	73.485	Panthera_tigris_altaica
ENSMAMG00000004717	trmu	99	70.218	ENSPTRG00000014510	TRMU	98	70.218	Pan_troglodytes
ENSMAMG00000004717	trmu	95	71.646	ENSPANG00000023074	TRMU	97	68.767	Papio_anubis
ENSMAMG00000004717	trmu	100	76.923	ENSPKIG00000002849	trmu	100	76.923	Paramormyrops_kingsleyae
ENSMAMG00000004717	trmu	92	72.063	ENSPSIG00000013020	TRMU	100	72.063	Pelodiscus_sinensis
ENSMAMG00000004717	trmu	100	81.731	ENSPMGG00000004083	trmu	100	81.731	Periophthalmus_magnuspinnatus
ENSMAMG00000004717	trmu	100	67.788	ENSPEMG00000014007	Trmu	98	67.788	Peromyscus_maniculatus_bairdii
ENSMAMG00000004717	trmu	95	66.751	ENSPCIG00000009923	TRMU	95	66.089	Phascolarctos_cinereus
ENSMAMG00000004717	trmu	96	81.546	ENSPFOG00000008197	trmu	90	81.546	Poecilia_formosa
ENSMAMG00000004717	trmu	99	83.575	ENSPLAG00000008414	trmu	99	83.575	Poecilia_latipinna
ENSMAMG00000004717	trmu	100	83.654	ENSPMEG00000004326	trmu	100	83.654	Poecilia_mexicana
ENSMAMG00000004717	trmu	99	84.058	ENSPREG00000007980	trmu	99	84.058	Poecilia_reticulata
ENSMAMG00000004717	trmu	99	70.218	ENSPPYG00000011949	TRMU	98	70.218	Pongo_abelii
ENSMAMG00000004717	trmu	91	62.599	ENSPCAG00000013462	TRMU	97	62.599	Procavia_capensis
ENSMAMG00000004717	trmu	97	68.889	ENSPCOG00000016539	TRMU	97	68.889	Propithecus_coquereli
ENSMAMG00000004717	trmu	97	64.691	ENSPVAG00000013202	TRMU	97	64.691	Pteropus_vampyrus
ENSMAMG00000004717	trmu	100	85.577	ENSPNYG00000005629	trmu	100	85.577	Pundamilia_nyererei
ENSMAMG00000004717	trmu	99	78.589	ENSPNAG00000006339	trmu	96	78.589	Pygocentrus_nattereri
ENSMAMG00000004717	trmu	99	68.204	ENSRNOG00000016465	Trmu	99	68.204	Rattus_norvegicus
ENSMAMG00000004717	trmu	99	69.007	ENSRBIG00000038973	TRMU	98	69.007	Rhinopithecus_bieti
ENSMAMG00000004717	trmu	99	69.249	ENSRROG00000004267	TRMU	98	69.249	Rhinopithecus_roxellana
ENSMAMG00000004717	trmu	94	32.990	YDL033C	SLM3	91	33.416	Saccharomyces_cerevisiae
ENSMAMG00000004717	trmu	99	69.249	ENSSBOG00000030184	TRMU	98	69.249	Saimiri_boliviensis_boliviensis
ENSMAMG00000004717	trmu	91	74.670	ENSSFOG00015020664	trmu	99	74.670	Scleropages_formosus
ENSMAMG00000004717	trmu	100	86.058	ENSSMAG00000019450	trmu	100	86.058	Scophthalmus_maximus
ENSMAMG00000004717	trmu	100	88.221	ENSSDUG00000011913	trmu	100	88.221	Seriola_dumerili
ENSMAMG00000004717	trmu	100	87.981	ENSSLDG00000011684	trmu	100	87.981	Seriola_lalandi_dorsalis
ENSMAMG00000004717	trmu	99	60.628	ENSSPUG00000017123	TRMU	98	60.628	Sphenodon_punctatus
ENSMAMG00000004717	trmu	100	83.413	ENSSPAG00000021875	trmu	100	83.413	Stegastes_partitus
ENSMAMG00000004717	trmu	97	69.383	ENSSSCG00000000007	TRMU	96	69.383	Sus_scrofa
ENSMAMG00000004717	trmu	89	73.727	ENSTGUG00000003663	-	100	73.727	Taeniopygia_guttata
ENSMAMG00000004717	trmu	99	84.504	ENSTRUG00000001231	trmu	100	84.504	Takifugu_rubripes
ENSMAMG00000004717	trmu	99	83.133	ENSTNIG00000010484	trmu	98	83.133	Tetraodon_nigroviridis
ENSMAMG00000004717	trmu	76	57.143	ENSTBEG00000011276	-	82	57.143	Tupaia_belangeri
ENSMAMG00000004717	trmu	95	71.899	ENSTTRG00000004160	TRMU	94	71.899	Tursiops_truncatus
ENSMAMG00000004717	trmu	76	73.540	ENSUAMG00000024825	TRMU	97	73.540	Ursus_americanus
ENSMAMG00000004717	trmu	95	59.446	ENSUMAG00000019079	TRMU	97	72.763	Ursus_maritimus
ENSMAMG00000004717	trmu	57	62.557	ENSVPAG00000000685	-	100	62.557	Vicugna_pacos
ENSMAMG00000004717	trmu	99	68.447	ENSVVUG00000024963	TRMU	98	68.447	Vulpes_vulpes
ENSMAMG00000004717	trmu	99	71.905	ENSXETG00000023304	trmu	99	71.905	Xenopus_tropicalis
ENSMAMG00000004717	trmu	99	83.213	ENSXCOG00000015105	trmu	99	83.213	Xiphophorus_couchianus
ENSMAMG00000004717	trmu	99	85.024	ENSXMAG00000006697	trmu	99	85.024	Xiphophorus_maculatus