EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000004735 (Gene tree)
Gene ID: 113141477
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 2099 bases
Position: chrOOHQ01000092.1:20190466-20192564
Accession: 113141477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000006948	PseudoU_synth_2	PF00849.22	8.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000007138	-	1130	-	ENSMAMP00000006948	311 (aa)	XP_026181698	UPI000E45991D

Gene Model

Click here to download ENSMAMG00000004735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004735	rpusd1	98	56.536	ENSG00000007376	RPUSD1	99	65.868	Homo_sapiens
ENSMAMG00000004735	rpusd1	100	83.923	ENSAPOG00000022221	rpusd1	100	85.531	Acanthochromis_polyacanthus
ENSMAMG00000004735	rpusd1	98	58.824	ENSAMEG00000007461	RPUSD1	98	58.824	Ailuropoda_melanoleuca
ENSMAMG00000004735	rpusd1	99	84.839	ENSACIG00000015863	rpusd1	100	84.839	Amphilophus_citrinellus
ENSMAMG00000004735	rpusd1	100	87.460	ENSAOCG00000021975	rpusd1	97	87.781	Amphiprion_ocellaris
ENSMAMG00000004735	rpusd1	100	87.781	ENSAPEG00000001316	rpusd1	97	88.103	Amphiprion_percula
ENSMAMG00000004735	rpusd1	100	87.460	ENSATEG00000002984	rpusd1	100	87.460	Anabas_testudineus
ENSMAMG00000004735	rpusd1	77	58.678	ENSAPLG00000012316	RPUSD1	98	57.895	Anas_platyrhynchos
ENSMAMG00000004735	rpusd1	98	63.399	ENSACAG00000008953	RPUSD1	99	62.951	Anolis_carolinensis
ENSMAMG00000004735	rpusd1	98	57.190	ENSANAG00000024709	RPUSD1	98	57.190	Aotus_nancymaae
ENSMAMG00000004735	rpusd1	99	84.566	ENSACLG00000013692	rpusd1	100	84.244	Astatotilapia_calliptera
ENSMAMG00000004735	rpusd1	99	67.752	ENSAMXG00000019802	rpusd1	99	66.775	Astyanax_mexicanus
ENSMAMG00000004735	rpusd1	98	60.131	ENSBTAG00000000179	RPUSD1	98	60.131	Bos_taurus
ENSMAMG00000004735	rpusd1	98	57.190	ENSCJAG00000012253	RPUSD1	98	57.190	Callithrix_jacchus
ENSMAMG00000004735	rpusd1	98	58.170	ENSCAFG00000019614	RPUSD1	84	65.613	Canis_familiaris
ENSMAMG00000004735	rpusd1	98	58.170	ENSCAFG00020008891	RPUSD1	84	65.613	Canis_lupus_dingo
ENSMAMG00000004735	rpusd1	98	60.458	ENSCHIG00000012872	RPUSD1	98	60.458	Capra_hircus
ENSMAMG00000004735	rpusd1	98	55.882	ENSTSYG00000036934	RPUSD1	98	55.882	Carlito_syrichta
ENSMAMG00000004735	rpusd1	98	57.843	ENSCAPG00000014219	RPUSD1	83	65.217	Cavia_aperea
ENSMAMG00000004735	rpusd1	98	57.843	ENSCPOG00000034604	RPUSD1	83	65.217	Cavia_porcellus
ENSMAMG00000004735	rpusd1	98	56.818	ENSCCAG00000034385	RPUSD1	98	56.863	Cebus_capucinus
ENSMAMG00000004735	rpusd1	98	57.190	ENSCATG00000042983	RPUSD1	98	57.190	Cercocebus_atys
ENSMAMG00000004735	rpusd1	98	57.190	ENSCLAG00000013966	RPUSD1	83	64.822	Chinchilla_lanigera
ENSMAMG00000004735	rpusd1	98	56.536	ENSCSAG00000012121	RPUSD1	98	56.536	Chlorocebus_sabaeus
ENSMAMG00000004735	rpusd1	98	61.311	ENSCPBG00000021101	RPUSD1	99	60.328	Chrysemys_picta_bellii
ENSMAMG00000004735	rpusd1	81	64.427	ENSCANG00000028576	RPUSD1	90	64.427	Colobus_angolensis_palliatus
ENSMAMG00000004735	rpusd1	98	56.678	ENSCGRG00001014253	Rpusd1	83	63.241	Cricetulus_griseus_chok1gshd
ENSMAMG00000004735	rpusd1	98	56.678	ENSCGRG00000017995	Rpusd1	83	63.241	Cricetulus_griseus_crigri
ENSMAMG00000004735	rpusd1	97	84.437	ENSCSEG00000018512	rpusd1	97	84.437	Cynoglossus_semilaevis
ENSMAMG00000004735	rpusd1	99	82.581	ENSCVAG00000022746	rpusd1	100	82.581	Cyprinodon_variegatus
ENSMAMG00000004735	rpusd1	98	69.508	ENSDARG00000060192	rpusd1	99	69.180	Danio_rerio
ENSMAMG00000004735	rpusd1	98	55.556	ENSDNOG00000003721	RPUSD1	82	62.451	Dasypus_novemcinctus
ENSMAMG00000004735	rpusd1	98	57.843	ENSDORG00000026656	Rpusd1	98	58.497	Dipodomys_ordii
ENSMAMG00000004735	rpusd1	96	46.497	ENSEBUG00000008767	rpusd1	85	49.822	Eptatretus_burgeri
ENSMAMG00000004735	rpusd1	98	58.013	ENSEASG00005018421	RPUSD1	61	65.613	Equus_asinus_asinus
ENSMAMG00000004735	rpusd1	99	72.313	ENSELUG00000014307	rpusd1	89	72.964	Esox_lucius
ENSMAMG00000004735	rpusd1	98	59.804	ENSFCAG00000010359	RPUSD1	98	59.477	Felis_catus
ENSMAMG00000004735	rpusd1	98	65.246	ENSFALG00000003211	RPUSD1	99	63.934	Ficedula_albicollis
ENSMAMG00000004735	rpusd1	98	58.170	ENSFDAG00000013398	RPUSD1	83	64.427	Fukomys_damarensis
ENSMAMG00000004735	rpusd1	99	80.000	ENSFHEG00000004736	rpusd1	100	81.290	Fundulus_heteroclitus
ENSMAMG00000004735	rpusd1	99	74.026	ENSGMOG00000010756	rpusd1	99	73.885	Gadus_morhua
ENSMAMG00000004735	rpusd1	98	63.934	ENSGALG00000005315	RPUSD1	99	62.951	Gallus_gallus
ENSMAMG00000004735	rpusd1	99	80.968	ENSGAFG00000009886	rpusd1	100	80.968	Gambusia_affinis
ENSMAMG00000004735	rpusd1	99	88.065	ENSGACG00000014276	rpusd1	100	88.387	Gasterosteus_aculeatus
ENSMAMG00000004735	rpusd1	98	61.311	ENSGAGG00000004181	RPUSD1	99	60.000	Gopherus_agassizii
ENSMAMG00000004735	rpusd1	98	57.329	ENSGGOG00000013997	RPUSD1	98	57.329	Gorilla_gorilla
ENSMAMG00000004735	rpusd1	99	84.887	ENSHBUG00000023728	rpusd1	100	84.566	Haplochromis_burtoni
ENSMAMG00000004735	rpusd1	98	57.190	ENSHGLG00000002595	RPUSD1	83	64.427	Heterocephalus_glaber_female
ENSMAMG00000004735	rpusd1	98	57.190	ENSHGLG00100014303	RPUSD1	83	64.427	Heterocephalus_glaber_male
ENSMAMG00000004735	rpusd1	99	77.524	ENSHCOG00000002390	rpusd1	99	76.873	Hippocampus_comes
ENSMAMG00000004735	rpusd1	98	67.434	ENSIPUG00000001570	rpusd1	98	66.776	Ictalurus_punctatus
ENSMAMG00000004735	rpusd1	98	57.843	ENSSTOG00000004276	RPUSD1	83	64.427	Ictidomys_tridecemlineatus
ENSMAMG00000004735	rpusd1	98	57.516	ENSJJAG00000015696	Rpusd1	83	64.427	Jaculus_jaculus
ENSMAMG00000004735	rpusd1	100	80.707	ENSKMAG00000017287	rpusd1	100	81.029	Kryptolebias_marmoratus
ENSMAMG00000004735	rpusd1	100	84.566	ENSLBEG00000022502	rpusd1	100	84.566	Labrus_bergylta
ENSMAMG00000004735	rpusd1	100	84.566	ENSLBEG00000013354	RPUSD1	100	84.566	Labrus_bergylta
ENSMAMG00000004735	rpusd1	98	60.328	ENSLACG00000008869	RPUSD1	99	60.000	Latimeria_chalumnae
ENSMAMG00000004735	rpusd1	69	81.776	ENSLOCG00000005682	rpusd1	99	81.776	Lepisosteus_oculatus
ENSMAMG00000004735	rpusd1	98	56.209	ENSLAFG00000002115	RPUSD1	84	64.032	Loxodonta_africana
ENSMAMG00000004735	rpusd1	98	57.190	ENSMFAG00000003961	RPUSD1	98	57.190	Macaca_fascicularis
ENSMAMG00000004735	rpusd1	98	57.190	ENSMMUG00000000842	RPUSD1	98	57.190	Macaca_mulatta
ENSMAMG00000004735	rpusd1	98	57.190	ENSMNEG00000042712	RPUSD1	98	57.190	Macaca_nemestrina
ENSMAMG00000004735	rpusd1	98	57.190	ENSMLEG00000030591	RPUSD1	98	57.190	Mandrillus_leucophaeus
ENSMAMG00000004735	rpusd1	99	84.566	ENSMZEG00005003214	rpusd1	100	84.244	Maylandia_zebra
ENSMAMG00000004735	rpusd1	97	64.238	ENSMGAG00000005447	RPUSD1	99	62.914	Meleagris_gallopavo
ENSMAMG00000004735	rpusd1	81	56.126	ENSMAUG00000019998	Rpusd1	96	56.126	Mesocricetus_auratus
ENSMAMG00000004735	rpusd1	98	56.536	ENSMICG00000017561	RPUSD1	78	72.549	Microcebus_murinus
ENSMAMG00000004735	rpusd1	98	58.170	ENSMOCG00000014082	Rpusd1	83	64.822	Microtus_ochrogaster
ENSMAMG00000004735	rpusd1	99	81.818	ENSMMOG00000012569	rpusd1	99	81.818	Mola_mola
ENSMAMG00000004735	rpusd1	99	63.961	ENSMODG00000016882	RPUSD1	99	63.312	Monodelphis_domestica
ENSMAMG00000004735	rpusd1	100	89.068	ENSMALG00000017818	rpusd1	100	89.068	Monopterus_albus
ENSMAMG00000004735	rpusd1	98	58.497	MGP_CAROLIEiJ_G0021244	Rpusd1	83	64.822	Mus_caroli
ENSMAMG00000004735	rpusd1	98	58.170	ENSMUSG00000041199	Rpusd1	83	64.822	Mus_musculus
ENSMAMG00000004735	rpusd1	98	58.170	MGP_PahariEiJ_G0023562	Rpusd1	82	64.427	Mus_pahari
ENSMAMG00000004735	rpusd1	98	58.170	MGP_SPRETEiJ_G0022155	Rpusd1	83	64.822	Mus_spretus
ENSMAMG00000004735	rpusd1	98	57.516	ENSMPUG00000015897	RPUSD1	84	64.427	Mustela_putorius_furo
ENSMAMG00000004735	rpusd1	98	58.170	ENSMLUG00000001089	RPUSD1	84	64.151	Myotis_lucifugus
ENSMAMG00000004735	rpusd1	98	57.190	ENSNGAG00000003595	Rpusd1	98	57.190	Nannospalax_galili
ENSMAMG00000004735	rpusd1	99	82.051	ENSNBRG00000006457	rpusd1	100	81.350	Neolamprologus_brichardi
ENSMAMG00000004735	rpusd1	54	50.000	ENSNLEG00000008424	-	97	50.000	Nomascus_leucogenys
ENSMAMG00000004735	rpusd1	98	62.058	ENSMEUG00000016049	RPUSD1	98	62.058	Notamacropus_eugenii
ENSMAMG00000004735	rpusd1	98	50.654	ENSOPRG00000008340	RPUSD1	98	50.654	Ochotona_princeps
ENSMAMG00000004735	rpusd1	98	56.863	ENSODEG00000016945	RPUSD1	87	61.481	Octodon_degus
ENSMAMG00000004735	rpusd1	99	85.065	ENSONIG00000015672	rpusd1	100	83.766	Oreochromis_niloticus
ENSMAMG00000004735	rpusd1	100	77.814	ENSORLG00000013009	rpusd1	100	77.814	Oryzias_latipes
ENSMAMG00000004735	rpusd1	100	78.457	ENSORLG00020010382	rpusd1	100	77.814	Oryzias_latipes_hni
ENSMAMG00000004735	rpusd1	100	77.492	ENSORLG00015021354	rpusd1	100	76.849	Oryzias_latipes_hsok
ENSMAMG00000004735	rpusd1	100	78.457	ENSOMEG00000021426	rpusd1	100	78.457	Oryzias_melastigma
ENSMAMG00000004735	rpusd1	98	56.818	ENSOGAG00000003795	RPUSD1	81	63.636	Otolemur_garnettii
ENSMAMG00000004735	rpusd1	98	60.458	ENSOARG00000014254	RPUSD1	98	60.458	Ovis_aries
ENSMAMG00000004735	rpusd1	98	56.863	ENSPPAG00000034797	RPUSD1	98	56.863	Pan_paniscus
ENSMAMG00000004735	rpusd1	98	59.804	ENSPPRG00000012389	RPUSD1	98	59.477	Panthera_pardus
ENSMAMG00000004735	rpusd1	98	59.416	ENSPTIG00000008545	RPUSD1	77	74.510	Panthera_tigris_altaica
ENSMAMG00000004735	rpusd1	98	56.863	ENSPTRG00000007565	RPUSD1	98	56.863	Pan_troglodytes
ENSMAMG00000004735	rpusd1	98	57.190	ENSPANG00000024401	RPUSD1	98	57.190	Papio_anubis
ENSMAMG00000004735	rpusd1	99	69.355	ENSPKIG00000018890	rpusd1	91	69.132	Paramormyrops_kingsleyae
ENSMAMG00000004735	rpusd1	98	62.623	ENSPSIG00000013945	RPUSD1	99	62.215	Pelodiscus_sinensis
ENSMAMG00000004735	rpusd1	99	76.774	ENSPMGG00000014950	rpusd1	99	76.129	Periophthalmus_magnuspinnatus
ENSMAMG00000004735	rpusd1	98	57.190	ENSPEMG00000000497	Rpusd1	83	63.636	Peromyscus_maniculatus_bairdii
ENSMAMG00000004735	rpusd1	99	54.870	ENSPMAG00000001563	rpusd1	99	54.870	Petromyzon_marinus
ENSMAMG00000004735	rpusd1	99	63.192	ENSPCIG00000021216	-	93	63.192	Phascolarctos_cinereus
ENSMAMG00000004735	rpusd1	99	81.613	ENSPFOG00000007946	rpusd1	100	80.000	Poecilia_formosa
ENSMAMG00000004735	rpusd1	99	81.935	ENSPLAG00000011925	rpusd1	100	80.000	Poecilia_latipinna
ENSMAMG00000004735	rpusd1	99	81.613	ENSPMEG00000002910	rpusd1	100	80.000	Poecilia_mexicana
ENSMAMG00000004735	rpusd1	99	82.581	ENSPREG00000019851	rpusd1	100	82.581	Poecilia_reticulata
ENSMAMG00000004735	rpusd1	98	44.444	ENSPCAG00000002258	RPUSD1	84	49.012	Procavia_capensis
ENSMAMG00000004735	rpusd1	98	55.844	ENSPCOG00000022582	RPUSD1	98	56.169	Propithecus_coquereli
ENSMAMG00000004735	rpusd1	98	53.420	ENSPVAG00000013104	RPUSD1	81	60.079	Pteropus_vampyrus
ENSMAMG00000004735	rpusd1	99	84.887	ENSPNYG00000024076	rpusd1	100	84.566	Pundamilia_nyererei
ENSMAMG00000004735	rpusd1	99	65.909	ENSPNAG00000013806	rpusd1	99	65.472	Pygocentrus_nattereri
ENSMAMG00000004735	rpusd1	98	58.497	ENSRNOG00000023639	Rpusd1	83	64.822	Rattus_norvegicus
ENSMAMG00000004735	rpusd1	98	57.516	ENSRBIG00000030238	RPUSD1	98	57.516	Rhinopithecus_bieti
ENSMAMG00000004735	rpusd1	98	57.516	ENSRROG00000036663	RPUSD1	98	57.516	Rhinopithecus_roxellana
ENSMAMG00000004735	rpusd1	98	57.516	ENSSBOG00000033063	RPUSD1	98	58.497	Saimiri_boliviensis_boliviensis
ENSMAMG00000004735	rpusd1	98	62.295	ENSSHAG00000013500	RPUSD1	98	62.295	Sarcophilus_harrisii
ENSMAMG00000004735	rpusd1	98	71.148	ENSSFOG00015014394	rpusd1	99	68.590	Scleropages_formosus
ENSMAMG00000004735	rpusd1	99	88.710	ENSSMAG00000008045	rpusd1	93	89.032	Scophthalmus_maximus
ENSMAMG00000004735	rpusd1	100	86.174	ENSSDUG00000001829	rpusd1	97	90.354	Seriola_dumerili
ENSMAMG00000004735	rpusd1	100	86.174	ENSSLDG00000020853	rpusd1	97	90.354	Seriola_lalandi_dorsalis
ENSMAMG00000004735	rpusd1	53	72.455	ENSSARG00000011187	-	100	72.455	Sorex_araneus
ENSMAMG00000004735	rpusd1	62	57.653	ENSSPUG00000005119	-	98	57.143	Sphenodon_punctatus
ENSMAMG00000004735	rpusd1	100	89.711	ENSSPAG00000012708	rpusd1	100	90.032	Stegastes_partitus
ENSMAMG00000004735	rpusd1	98	58.766	ENSSSCG00000008000	RPUSD1	98	66.142	Sus_scrofa
ENSMAMG00000004735	rpusd1	81	69.323	ENSTGUG00000015375	RPUSD1	99	69.323	Taeniopygia_guttata
ENSMAMG00000004735	rpusd1	100	82.637	ENSTRUG00000003041	rpusd1	99	82.315	Takifugu_rubripes
ENSMAMG00000004735	rpusd1	99	72.638	ENSTNIG00000002660	rpusd1	99	72.638	Tetraodon_nigroviridis
ENSMAMG00000004735	rpusd1	98	59.283	ENSTTRG00000010167	RPUSD1	81	66.798	Tursiops_truncatus
ENSMAMG00000004735	rpusd1	98	58.170	ENSUAMG00000012736	RPUSD1	98	58.170	Ursus_americanus
ENSMAMG00000004735	rpusd1	98	58.170	ENSUMAG00000021174	RPUSD1	91	65.217	Ursus_maritimus
ENSMAMG00000004735	rpusd1	98	58.497	ENSVVUG00000012357	RPUSD1	84	65.217	Vulpes_vulpes
ENSMAMG00000004735	rpusd1	98	62.623	ENSXETG00000007184	rpusd1	98	62.295	Xenopus_tropicalis
ENSMAMG00000004735	rpusd1	99	81.613	ENSXCOG00000017930	rpusd1	100	81.613	Xiphophorus_couchianus
ENSMAMG00000004735	rpusd1	99	81.613	ENSXMAG00000024084	rpusd1	100	81.613	Xiphophorus_maculatus