EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000004800 (Gene tree)
Gene ID: 113123738
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8632 bases
Position: chrOOHQ01000093.1:14112319-14120950
Accession: 113123738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000007033	RRM_1	PF00076.22	1.6e-12	1	1
ENSMAMP00000007033	RRM_3	PF08777.11	1.4e-28	1	1
ENSMAMP00000007033	La	PF05383.17	6.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000007230	-	4338	-	ENSMAMP00000007033	398 (aa)	XP_026151775	UPI000E464DA8

Gene Model

Click here to download ENSMAMG00000004800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004800	ssb	100	57.702	ENSG00000138385	SSB	98	65.254	Homo_sapiens
ENSMAMG00000004800	ssb	100	87.186	ENSAPOG00000003448	ssb	100	87.186	Acanthochromis_polyacanthus
ENSMAMG00000004800	ssb	100	56.802	ENSAMEG00000010507	SSB	99	56.563	Ailuropoda_melanoleuca
ENSMAMG00000004800	ssb	93	82.527	ENSACIG00000001738	ssb	97	82.258	Amphilophus_citrinellus
ENSMAMG00000004800	ssb	100	87.437	ENSAOCG00000020398	ssb	100	87.437	Amphiprion_ocellaris
ENSMAMG00000004800	ssb	100	87.437	ENSAPEG00000020395	ssb	100	87.437	Amphiprion_percula
ENSMAMG00000004800	ssb	100	90.226	ENSATEG00000016884	ssb	100	90.226	Anabas_testudineus
ENSMAMG00000004800	ssb	100	55.319	ENSAPLG00000006109	SSB	99	55.924	Anas_platyrhynchos
ENSMAMG00000004800	ssb	100	54.745	ENSACAG00000017008	SSB	99	54.988	Anolis_carolinensis
ENSMAMG00000004800	ssb	100	52.217	ENSANAG00000027195	-	99	52.217	Aotus_nancymaae
ENSMAMG00000004800	ssb	100	79.449	ENSACLG00000010798	ssb	100	78.947	Astatotilapia_calliptera
ENSMAMG00000004800	ssb	100	59.268	ENSAMXG00000012606	ssb	100	60.732	Astyanax_mexicanus
ENSMAMG00000004800	ssb	100	58.765	ENSBTAG00000008716	SSB	99	58.272	Bos_taurus
ENSMAMG00000004800	ssb	75	35.314	WBGene00016653	C44E4.4	76	36.928	Caenorhabditis_elegans
ENSMAMG00000004800	ssb	100	59.113	ENSCJAG00000045073	SSB	99	58.867	Callithrix_jacchus
ENSMAMG00000004800	ssb	100	58.968	ENSCAFG00000012418	SSB	99	58.477	Canis_familiaris
ENSMAMG00000004800	ssb	100	58.968	ENSCAFG00020002900	SSB	99	58.477	Canis_lupus_dingo
ENSMAMG00000004800	ssb	100	58.621	ENSCHIG00000022624	-	99	58.128	Capra_hircus
ENSMAMG00000004800	ssb	100	54.591	ENSCHIG00000022196	-	82	60.245	Capra_hircus
ENSMAMG00000004800	ssb	99	58.272	ENSTSYG00000000097	SSB	99	57.778	Carlito_syrichta
ENSMAMG00000004800	ssb	100	59.852	ENSCPOG00000003338	SSB	99	59.360	Cavia_porcellus
ENSMAMG00000004800	ssb	100	58.867	ENSCCAG00000035147	SSB	99	58.621	Cebus_capucinus
ENSMAMG00000004800	ssb	72	54.983	ENSCATG00000036701	SSB	83	54.639	Cercocebus_atys
ENSMAMG00000004800	ssb	99	43.890	ENSCATG00000042909	-	98	43.641	Cercocebus_atys
ENSMAMG00000004800	ssb	100	59.852	ENSCLAG00000015617	-	99	59.360	Chinchilla_lanigera
ENSMAMG00000004800	ssb	97	55.128	ENSCSAG00000018390	-	97	54.872	Chlorocebus_sabaeus
ENSMAMG00000004800	ssb	100	58.867	ENSCSAG00000015200	SSB	88	58.621	Chlorocebus_sabaeus
ENSMAMG00000004800	ssb	100	59.113	ENSCHOG00000007763	SSB	99	58.621	Choloepus_hoffmanni
ENSMAMG00000004800	ssb	100	59.512	ENSCPBG00000006519	SSB	99	60.244	Chrysemys_picta_bellii
ENSMAMG00000004800	ssb	100	51.358	ENSCANG00000033240	-	99	51.358	Colobus_angolensis_palliatus
ENSMAMG00000004800	ssb	95	46.494	ENSCANG00000028838	-	91	46.494	Colobus_angolensis_palliatus
ENSMAMG00000004800	ssb	100	58.374	ENSCANG00000027695	SSB	99	58.621	Colobus_angolensis_palliatus
ENSMAMG00000004800	ssb	100	53.071	ENSCGRG00001024831	Ssb	99	53.563	Cricetulus_griseus_chok1gshd
ENSMAMG00000004800	ssb	100	53.071	ENSCGRG00000005387	Ssb	99	53.563	Cricetulus_griseus_crigri
ENSMAMG00000004800	ssb	99	84.925	ENSCSEG00000011599	ssb	99	84.925	Cynoglossus_semilaevis
ENSMAMG00000004800	ssb	100	79.500	ENSCVAG00000021558	ssb	100	80.000	Cyprinodon_variegatus
ENSMAMG00000004800	ssb	100	65.432	ENSDARG00000029252	ssb	100	65.432	Danio_rerio
ENSMAMG00000004800	ssb	100	59.606	ENSDNOG00000013450	SSB	99	59.113	Dasypus_novemcinctus
ENSMAMG00000004800	ssb	100	55.309	ENSDORG00000005543	Ssb	99	55.309	Dipodomys_ordii
ENSMAMG00000004800	ssb	86	35.196	FBgn0011638	La	79	36.000	Drosophila_melanogaster
ENSMAMG00000004800	ssb	51	64.356	ENSETEG00000004614	-	52	64.356	Echinops_telfairi
ENSMAMG00000004800	ssb	99	45.363	ENSEBUG00000001237	ssb	82	48.750	Eptatretus_burgeri
ENSMAMG00000004800	ssb	100	59.360	ENSEASG00005022835	SSB	99	58.867	Equus_asinus_asinus
ENSMAMG00000004800	ssb	100	59.360	ENSECAG00000018495	SSB	99	58.867	Equus_caballus
ENSMAMG00000004800	ssb	77	50.974	ENSEEUG00000008077	SSB	78	50.974	Erinaceus_europaeus
ENSMAMG00000004800	ssb	100	73.515	ENSELUG00000020929	ssb	100	73.762	Esox_lucius
ENSMAMG00000004800	ssb	100	59.214	ENSFCAG00000011601	SSB	99	58.722	Felis_catus
ENSMAMG00000004800	ssb	99	57.494	ENSFALG00000000930	SSB	99	57.248	Ficedula_albicollis
ENSMAMG00000004800	ssb	100	60.099	ENSFDAG00000000598	SSB	99	59.606	Fukomys_damarensis
ENSMAMG00000004800	ssb	75	80.464	ENSFHEG00000003268	ssb	94	79.153	Fundulus_heteroclitus
ENSMAMG00000004800	ssb	98	74.250	ENSGMOG00000002664	ssb	100	74.250	Gadus_morhua
ENSMAMG00000004800	ssb	99	59.314	ENSGALG00000009677	SSB	99	58.088	Gallus_gallus
ENSMAMG00000004800	ssb	100	82.630	ENSGAFG00000002749	ssb	100	82.630	Gambusia_affinis
ENSMAMG00000004800	ssb	100	79.703	ENSGACG00000005107	ssb	100	79.703	Gasterosteus_aculeatus
ENSMAMG00000004800	ssb	100	60.000	ENSGAGG00000007807	SSB	99	60.000	Gopherus_agassizii
ENSMAMG00000004800	ssb	54	53.363	ENSGGOG00000023471	-	90	52.915	Gorilla_gorilla
ENSMAMG00000004800	ssb	100	50.739	ENSGGOG00000024891	-	99	50.739	Gorilla_gorilla
ENSMAMG00000004800	ssb	100	79.699	ENSHBUG00000006584	ssb	100	79.198	Haplochromis_burtoni
ENSMAMG00000004800	ssb	100	54.300	ENSHGLG00000004478	-	99	53.808	Heterocephalus_glaber_female
ENSMAMG00000004800	ssb	100	53.367	ENSHGLG00000005832	-	99	52.868	Heterocephalus_glaber_female
ENSMAMG00000004800	ssb	100	59.709	ENSHGLG00000017580	-	99	59.367	Heterocephalus_glaber_female
ENSMAMG00000004800	ssb	100	53.941	ENSHGLG00100008767	-	99	53.713	Heterocephalus_glaber_male
ENSMAMG00000004800	ssb	100	59.709	ENSHGLG00100003084	-	99	59.367	Heterocephalus_glaber_male
ENSMAMG00000004800	ssb	99	76.768	ENSHCOG00000019011	ssb	99	77.525	Hippocampus_comes
ENSMAMG00000004800	ssb	100	64.234	ENSIPUG00000003681	SSB	100	64.234	Ictalurus_punctatus
ENSMAMG00000004800	ssb	100	58.867	ENSSTOG00000008416	SSB	99	58.374	Ictidomys_tridecemlineatus
ENSMAMG00000004800	ssb	89	48.468	ENSJJAG00000016250	-	94	47.911	Jaculus_jaculus
ENSMAMG00000004800	ssb	100	52.983	ENSJJAG00000023158	-	99	52.632	Jaculus_jaculus
ENSMAMG00000004800	ssb	100	84.673	ENSKMAG00000017317	ssb	100	84.673	Kryptolebias_marmoratus
ENSMAMG00000004800	ssb	100	84.925	ENSLBEG00000017345	ssb	100	84.925	Labrus_bergylta
ENSMAMG00000004800	ssb	100	55.746	ENSLACG00000014056	SSB	99	56.479	Latimeria_chalumnae
ENSMAMG00000004800	ssb	100	66.830	ENSLOCG00000007933	ssb	99	66.830	Lepisosteus_oculatus
ENSMAMG00000004800	ssb	75	44.631	ENSLAFG00000026721	-	98	44.631	Loxodonta_africana
ENSMAMG00000004800	ssb	100	51.852	ENSLAFG00000028909	-	99	50.617	Loxodonta_africana
ENSMAMG00000004800	ssb	93	57.069	ENSLAFG00000000867	-	99	55.344	Loxodonta_africana
ENSMAMG00000004800	ssb	90	51.247	ENSMFAG00000041478	-	90	53.823	Macaca_fascicularis
ENSMAMG00000004800	ssb	100	58.374	ENSMFAG00000039066	SSB	99	58.621	Macaca_fascicularis
ENSMAMG00000004800	ssb	99	42.893	ENSMMUG00000039889	-	98	42.893	Macaca_mulatta
ENSMAMG00000004800	ssb	100	51.232	ENSMMUG00000011724	-	97	50.739	Macaca_mulatta
ENSMAMG00000004800	ssb	100	58.374	ENSMMUG00000023051	SSB	99	58.621	Macaca_mulatta
ENSMAMG00000004800	ssb	100	50.488	ENSMNEG00000028321	SSB	85	68.696	Macaca_nemestrina
ENSMAMG00000004800	ssb	90	51.247	ENSMNEG00000034698	-	90	53.823	Macaca_nemestrina
ENSMAMG00000004800	ssb	100	58.374	ENSMLEG00000035717	SSB	99	58.621	Mandrillus_leucophaeus
ENSMAMG00000004800	ssb	100	41.481	ENSMLEG00000042644	-	99	41.278	Mandrillus_leucophaeus
ENSMAMG00000004800	ssb	100	79.449	ENSMZEG00005005749	ssb	100	78.947	Maylandia_zebra
ENSMAMG00000004800	ssb	99	58.578	ENSMGAG00000010328	SSB	100	65.217	Meleagris_gallopavo
ENSMAMG00000004800	ssb	98	53.671	ENSMICG00000033304	-	93	55.978	Microcebus_murinus
ENSMAMG00000004800	ssb	100	59.360	ENSMICG00000028252	-	99	58.867	Microcebus_murinus
ENSMAMG00000004800	ssb	86	56.471	ENSMODG00000007027	-	99	56.471	Monodelphis_domestica
ENSMAMG00000004800	ssb	100	57.073	ENSMODG00000008227	-	99	57.178	Monodelphis_domestica
ENSMAMG00000004800	ssb	100	49.136	ENSMODG00000019271	-	99	49.383	Monodelphis_domestica
ENSMAMG00000004800	ssb	92	85.479	ENSMALG00000008045	ssb	90	84.409	Monopterus_albus
ENSMAMG00000004800	ssb	100	53.735	MGP_CAROLIEiJ_G0023629	-	98	64.968	Mus_caroli
ENSMAMG00000004800	ssb	100	53.735	ENSMUSG00000068882	Ssb	98	64.968	Mus_musculus
ENSMAMG00000004800	ssb	100	53.494	MGP_PahariEiJ_G0025081	-	98	64.331	Mus_pahari
ENSMAMG00000004800	ssb	100	53.735	MGP_SPRETEiJ_G0024551	Ssb	98	64.968	Mus_spretus
ENSMAMG00000004800	ssb	100	58.867	ENSMPUG00000000785	SSB	99	58.374	Mustela_putorius_furo
ENSMAMG00000004800	ssb	100	57.831	ENSMLUG00000016316	SSB	99	57.590	Myotis_lucifugus
ENSMAMG00000004800	ssb	100	78.750	ENSNBRG00000012661	ssb	100	78.250	Neolamprologus_brichardi
ENSMAMG00000004800	ssb	84	48.368	ENSNLEG00000028754	-	77	49.235	Nomascus_leucogenys
ENSMAMG00000004800	ssb	100	58.128	ENSNLEG00000004958	SSB	99	58.374	Nomascus_leucogenys
ENSMAMG00000004800	ssb	63	64.400	ENSMEUG00000001650	-	100	64.400	Notamacropus_eugenii
ENSMAMG00000004800	ssb	93	58.177	ENSODEG00000004202	-	99	57.909	Octodon_degus
ENSMAMG00000004800	ssb	100	80.750	ENSONIG00000008776	ssb	100	80.250	Oreochromis_niloticus
ENSMAMG00000004800	ssb	100	59.360	ENSOANG00000008543	SSB	99	59.360	Ornithorhynchus_anatinus
ENSMAMG00000004800	ssb	100	58.867	ENSOCUG00000010396	SSB	99	58.621	Oryctolagus_cuniculus
ENSMAMG00000004800	ssb	100	81.250	ENSORLG00000017208	ssb	100	81.250	Oryzias_latipes
ENSMAMG00000004800	ssb	100	81.297	ENSORLG00020022574	ssb	100	81.546	Oryzias_latipes_hni
ENSMAMG00000004800	ssb	100	81.750	ENSORLG00015016592	ssb	100	81.750	Oryzias_latipes_hsok
ENSMAMG00000004800	ssb	100	84.040	ENSOMEG00000003193	ssb	100	83.042	Oryzias_melastigma
ENSMAMG00000004800	ssb	100	56.295	ENSOGAG00000029768	SSB	99	56.057	Otolemur_garnettii
ENSMAMG00000004800	ssb	100	58.621	ENSOARG00000002906	SSB	99	58.128	Ovis_aries
ENSMAMG00000004800	ssb	92	47.989	ENSPPAG00000006189	-	95	46.113	Pan_paniscus
ENSMAMG00000004800	ssb	100	50.493	ENSPPAG00000032427	-	100	58.915	Pan_paniscus
ENSMAMG00000004800	ssb	100	57.702	ENSPPAG00000042673	SSB	99	57.946	Pan_paniscus
ENSMAMG00000004800	ssb	100	59.214	ENSPPRG00000006599	SSB	99	58.722	Panthera_pardus
ENSMAMG00000004800	ssb	100	59.214	ENSPTIG00000011021	SSB	97	58.722	Panthera_tigris_altaica
ENSMAMG00000004800	ssb	100	57.702	ENSPTRG00000012620	SSB	99	57.946	Pan_troglodytes
ENSMAMG00000004800	ssb	100	48.276	ENSPTRG00000042880	-	99	48.276	Pan_troglodytes
ENSMAMG00000004800	ssb	99	42.394	ENSPANG00000034126	-	76	46.584	Papio_anubis
ENSMAMG00000004800	ssb	100	58.374	ENSPANG00000007440	SSB	99	58.621	Papio_anubis
ENSMAMG00000004800	ssb	97	42.051	ENSPANG00000031877	-	92	41.282	Papio_anubis
ENSMAMG00000004800	ssb	100	70.398	ENSPKIG00000019325	ssb	99	70.398	Paramormyrops_kingsleyae
ENSMAMG00000004800	ssb	100	59.512	ENSPSIG00000002265	SSB	93	60.244	Pelodiscus_sinensis
ENSMAMG00000004800	ssb	80	79.128	ENSPMGG00000020075	ssb	91	74.148	Periophthalmus_magnuspinnatus
ENSMAMG00000004800	ssb	96	44.444	ENSPMAG00000002982	ssb	90	44.246	Petromyzon_marinus
ENSMAMG00000004800	ssb	93	61.067	ENSPCIG00000028591	-	99	59.360	Phascolarctos_cinereus
ENSMAMG00000004800	ssb	100	83.250	ENSPFOG00000009650	ssb	100	83.250	Poecilia_formosa
ENSMAMG00000004800	ssb	100	82.250	ENSPLAG00000020498	ssb	100	83.250	Poecilia_latipinna
ENSMAMG00000004800	ssb	100	83.250	ENSPMEG00000001051	ssb	100	83.250	Poecilia_mexicana
ENSMAMG00000004800	ssb	93	84.946	ENSPREG00000003708	ssb	98	84.718	Poecilia_reticulata
ENSMAMG00000004800	ssb	100	58.128	ENSPPYG00000012919	SSB	99	58.374	Pongo_abelii
ENSMAMG00000004800	ssb	95	56.771	ENSPCAG00000010276	SSB	99	56.510	Procavia_capensis
ENSMAMG00000004800	ssb	100	52.709	ENSPCOG00000023189	-	99	52.217	Propithecus_coquereli
ENSMAMG00000004800	ssb	100	56.404	ENSPCOG00000015741	-	92	64.655	Propithecus_coquereli
ENSMAMG00000004800	ssb	88	60.623	ENSPVAG00000006615	SSB	99	60.623	Pteropus_vampyrus
ENSMAMG00000004800	ssb	100	79.699	ENSPNYG00000006444	ssb	100	79.198	Pundamilia_nyererei
ENSMAMG00000004800	ssb	100	62.195	ENSPNAG00000011708	ssb	100	62.439	Pygocentrus_nattereri
ENSMAMG00000004800	ssb	100	52.771	ENSRNOG00000007998	Ssb	99	52.289	Rattus_norvegicus
ENSMAMG00000004800	ssb	100	53.234	ENSRNOG00000011606	AABR07061825.1	99	52.736	Rattus_norvegicus
ENSMAMG00000004800	ssb	94	49.868	ENSRBIG00000041232	-	98	49.604	Rhinopithecus_bieti
ENSMAMG00000004800	ssb	99	42.040	ENSRBIG00000029918	-	98	41.791	Rhinopithecus_bieti
ENSMAMG00000004800	ssb	89	53.444	ENSRBIG00000041608	-	97	50.964	Rhinopithecus_bieti
ENSMAMG00000004800	ssb	100	50.976	ENSRBIG00000041972	SSB	88	68.696	Rhinopithecus_bieti
ENSMAMG00000004800	ssb	89	54.821	ENSRROG00000034102	-	96	51.768	Rhinopithecus_roxellana
ENSMAMG00000004800	ssb	98	50.505	ENSRROG00000031684	-	99	50.253	Rhinopithecus_roxellana
ENSMAMG00000004800	ssb	99	47.264	ENSRROG00000007149	-	98	47.015	Rhinopithecus_roxellana
ENSMAMG00000004800	ssb	100	58.374	ENSRROG00000040346	SSB	99	58.621	Rhinopithecus_roxellana
ENSMAMG00000004800	ssb	100	58.867	ENSSBOG00000027204	SSB	99	58.621	Saimiri_boliviensis_boliviensis
ENSMAMG00000004800	ssb	100	58.867	ENSSHAG00000018062	SSB	99	59.113	Sarcophilus_harrisii
ENSMAMG00000004800	ssb	100	69.704	ENSSFOG00015000550	ssb	99	69.704	Scleropages_formosus
ENSMAMG00000004800	ssb	100	81.658	ENSSMAG00000013885	ssb	99	85.753	Scophthalmus_maximus
ENSMAMG00000004800	ssb	100	90.201	ENSSDUG00000020117	ssb	100	90.201	Seriola_dumerili
ENSMAMG00000004800	ssb	100	84.673	ENSSLDG00000002525	ssb	100	84.925	Seriola_lalandi_dorsalis
ENSMAMG00000004800	ssb	95	53.385	ENSSARG00000007747	SSB	99	53.385	Sorex_araneus
ENSMAMG00000004800	ssb	100	60.294	ENSSPUG00000012112	SSB	99	60.784	Sphenodon_punctatus
ENSMAMG00000004800	ssb	100	86.432	ENSSPAG00000005696	ssb	100	86.432	Stegastes_partitus
ENSMAMG00000004800	ssb	94	56.499	ENSSSCG00000015938	SSB	93	56.233	Sus_scrofa
ENSMAMG00000004800	ssb	95	57.732	ENSTGUG00000007942	SSB	99	56.724	Taeniopygia_guttata
ENSMAMG00000004800	ssb	100	79.397	ENSTRUG00000017839	ssb	100	82.161	Takifugu_rubripes
ENSMAMG00000004800	ssb	92	79.946	ENSTNIG00000000915	ssb	91	86.111	Tetraodon_nigroviridis
ENSMAMG00000004800	ssb	82	68.696	ENSTBEG00000009056	SSB	81	68.696	Tupaia_belangeri
ENSMAMG00000004800	ssb	100	59.459	ENSTTRG00000002152	SSB	99	58.968	Tursiops_truncatus
ENSMAMG00000004800	ssb	93	60.533	ENSUAMG00000027833	SSB	98	60.000	Ursus_americanus
ENSMAMG00000004800	ssb	100	58.722	ENSUMAG00000013907	SSB	99	58.231	Ursus_maritimus
ENSMAMG00000004800	ssb	100	59.158	ENSVPAG00000007183	SSB	99	58.663	Vicugna_pacos
ENSMAMG00000004800	ssb	100	58.968	ENSVVUG00000016573	SSB	77	58.477	Vulpes_vulpes
ENSMAMG00000004800	ssb	99	53.037	ENSXETG00000025402	ssb	99	52.804	Xenopus_tropicalis
ENSMAMG00000004800	ssb	93	79.301	ENSXCOG00000019109	ssb	97	79.301	Xiphophorus_couchianus
ENSMAMG00000004800	ssb	100	80.893	ENSXMAG00000004888	ssb	100	80.893	Xiphophorus_maculatus