EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000004896 (Gene tree)
Gene ID: 113133867
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: growth factor independent 1A transcription repressor a
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 2299 bases
Position: chrOOHQ01000035.1:9960825-9963123
Accession: ZDB-GENE-050522-534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000007200	zf-C2H2	PF00096.26	6.8e-26	1	5
ENSMAMP00000007200	zf-C2H2	PF00096.26	6.8e-26	2	5
ENSMAMP00000007200	zf-C2H2	PF00096.26	6.8e-26	3	5
ENSMAMP00000007200	zf-C2H2	PF00096.26	6.8e-26	4	5
ENSMAMP00000007200	zf-C2H2	PF00096.26	6.8e-26	5	5
ENSMAMP00000007200	zf-met	PF12874.7	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000007397	-	1182	-	ENSMAMP00000007200	393 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000004896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000004896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000004896	gfi1aa	100	61.845	ENSMAMG00000008125	gfi1ab	100	61.097
ENSMAMG00000004896	gfi1aa	60	43.333	ENSMAMG00000014896	wt1a	59	43.333
ENSMAMG00000004896	gfi1aa	54	39.640	ENSMAMG00000018743	-	72	39.640
ENSMAMG00000004896	gfi1aa	51	41.520	ENSMAMG00000022206	-	77	41.520
ENSMAMG00000004896	gfi1aa	55	46.774	ENSMAMG00000016119	-	92	46.774
ENSMAMG00000004896	gfi1aa	52	40.876	ENSMAMG00000015670	-	65	40.876
ENSMAMG00000004896	gfi1aa	61	37.989	ENSMAMG00000016519	-	96	37.989
ENSMAMG00000004896	gfi1aa	56	39.752	ENSMAMG00000019301	-	95	41.135
ENSMAMG00000004896	gfi1aa	51	41.860	ENSMAMG00000019385	-	61	41.860
ENSMAMG00000004896	gfi1aa	52	39.850	ENSMAMG00000022152	-	60	39.850
ENSMAMG00000004896	gfi1aa	50	40.625	ENSMAMG00000022154	-	57	40.625
ENSMAMG00000004896	gfi1aa	53	44.860	ENSMAMG00000006312	-	88	44.860
ENSMAMG00000004896	gfi1aa	51	47.748	ENSMAMG00000023490	-	56	47.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000004896	gfi1aa	100	83.000	ENSAPOG00000005043	gfi1aa	100	84.500	Acanthochromis_polyacanthus
ENSMAMG00000004896	gfi1aa	100	79.198	ENSACIG00000021378	gfi1aa	100	80.702	Amphilophus_citrinellus
ENSMAMG00000004896	gfi1aa	100	82.000	ENSAOCG00000022957	gfi1aa	100	83.500	Amphiprion_ocellaris
ENSMAMG00000004896	gfi1aa	100	82.250	ENSAPEG00000014539	gfi1aa	100	83.750	Amphiprion_percula
ENSMAMG00000004896	gfi1aa	100	81.250	ENSATEG00000019026	gfi1aa	99	88.571	Anabas_testudineus
ENSMAMG00000004896	gfi1aa	100	80.750	ENSACLG00000008641	gfi1aa	100	80.500	Astatotilapia_calliptera
ENSMAMG00000004896	gfi1aa	100	61.404	ENSDARG00000020746	gfi1aa	100	60.652	Danio_rerio
ENSMAMG00000004896	gfi1aa	100	79.597	ENSHBUG00000007389	gfi1aa	100	79.345	Haplochromis_burtoni
ENSMAMG00000004896	gfi1aa	100	74.242	ENSKMAG00000002148	gfi1aa	100	73.990	Kryptolebias_marmoratus
ENSMAMG00000004896	gfi1aa	100	76.750	ENSLBEG00000006603	gfi1aa	100	75.500	Labrus_bergylta
ENSMAMG00000004896	gfi1aa	100	80.750	ENSMZEG00005004578	gfi1aa	100	80.500	Maylandia_zebra
ENSMAMG00000004896	gfi1aa	100	55.838	ENSMMOG00000006167	gfi1aa	99	78.571	Mola_mola
ENSMAMG00000004896	gfi1aa	100	80.750	ENSNBRG00000002673	gfi1aa	100	80.500	Neolamprologus_brichardi
ENSMAMG00000004896	gfi1aa	100	79.699	ENSPNYG00000002189	gfi1aa	100	79.449	Pundamilia_nyererei
ENSMAMG00000004896	gfi1aa	100	76.658	ENSSMAG00000006797	gfi1aa	100	77.396	Scophthalmus_maximus
ENSMAMG00000004896	gfi1aa	100	81.841	ENSSDUG00000011654	gfi1aa	100	82.090	Seriola_dumerili
ENSMAMG00000004896	gfi1aa	100	80.250	ENSSLDG00000016512	gfi1aa	100	80.500	Seriola_lalandi_dorsalis
ENSMAMG00000004896	gfi1aa	85	78.947	ENSSPAG00000000927	gfi1aa	94	80.702	Stegastes_partitus
ENSMAMG00000004896	gfi1aa	100	75.810	ENSTRUG00000004744	gfi1aa	100	75.561	Takifugu_rubripes