EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000005235 (Gene tree)
Gene ID: 113141148
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 13335 bases
Position: chrOOHQ01000092.1:4182353-4195687
Accession: 113141148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000007661	Btz	PF09405.10	5.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000007873	-	6581	-	ENSMAMP00000007661	775 (aa)	XP_026181173	UPI000E456FC8

Gene Model

Click here to download ENSMAMG00000005235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000005235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000005235	casc3	69	54.724	ENSG00000108349	CASC3	72	64.417	Homo_sapiens
ENSMAMG00000005235	casc3	96	70.410	ENSAPOG00000008467	casc3	96	72.200	Acanthochromis_polyacanthus
ENSMAMG00000005235	casc3	69	55.731	ENSAMEG00000007764	CASC3	75	53.360	Ailuropoda_melanoleuca
ENSMAMG00000005235	casc3	72	88.811	ENSACIG00000000720	casc3	79	88.811	Amphilophus_citrinellus
ENSMAMG00000005235	casc3	96	73.077	ENSAOCG00000016676	casc3	96	73.740	Amphiprion_ocellaris
ENSMAMG00000005235	casc3	96	72.267	ENSAPEG00000006787	casc3	96	73.467	Amphiprion_percula
ENSMAMG00000005235	casc3	96	80.563	ENSATEG00000017196	casc3	96	80.831	Anabas_testudineus
ENSMAMG00000005235	casc3	67	54.148	ENSACAG00000002674	CASC3	67	56.459	Anolis_carolinensis
ENSMAMG00000005235	casc3	75	50.323	ENSANAG00000034820	-	83	50.000	Aotus_nancymaae
ENSMAMG00000005235	casc3	50	61.765	ENSANAG00000031954	-	84	62.745	Aotus_nancymaae
ENSMAMG00000005235	casc3	95	74.866	ENSACLG00000016198	casc3	96	75.737	Astatotilapia_calliptera
ENSMAMG00000005235	casc3	77	56.641	ENSBTAG00000006250	CASC3	82	52.848	Bos_taurus
ENSMAMG00000005235	casc3	71	54.762	ENSCJAG00000016032	CASC3	76	52.778	Callithrix_jacchus
ENSMAMG00000005235	casc3	69	53.725	ENSCAFG00020018882	CASC3	84	52.549	Canis_lupus_dingo
ENSMAMG00000005235	casc3	76	52.866	ENSCHIG00000006338	CASC3	82	52.201	Capra_hircus
ENSMAMG00000005235	casc3	68	55.102	ENSTSYG00000002975	CASC3	75	54.286	Carlito_syrichta
ENSMAMG00000005235	casc3	56	68.387	ENSCAPG00000010514	CASC3	83	53.617	Cavia_aperea
ENSMAMG00000005235	casc3	69	55.118	ENSCPOG00000015139	CASC3	76	53.937	Cavia_porcellus
ENSMAMG00000005235	casc3	69	55.118	ENSCATG00000033593	CASC3	75	53.150	Cercocebus_atys
ENSMAMG00000005235	casc3	69	56.299	ENSCLAG00000013730	CASC3	75	54.510	Chinchilla_lanigera
ENSMAMG00000005235	casc3	69	55.118	ENSCSAG00000002777	CASC3	76	53.150	Chlorocebus_sabaeus
ENSMAMG00000005235	casc3	85	50.311	ENSCPBG00000004750	CASC3	77	54.430	Chrysemys_picta_bellii
ENSMAMG00000005235	casc3	69	55.118	ENSCANG00000008814	CASC3	75	53.150	Colobus_angolensis_palliatus
ENSMAMG00000005235	casc3	100	67.125	ENSCSEG00000010047	casc3	96	66.667	Cynoglossus_semilaevis
ENSMAMG00000005235	casc3	96	68.850	ENSCVAG00000014935	casc3	96	67.470	Cyprinodon_variegatus
ENSMAMG00000005235	casc3	93	44.295	ENSDNOG00000017249	CASC3	72	55.118	Dasypus_novemcinctus
ENSMAMG00000005235	casc3	78	48.875	ENSETEG00000013720	CASC3	82	48.837	Echinops_telfairi
ENSMAMG00000005235	casc3	66	37.778	ENSEBUG00000010654	casc3	59	41.429	Eptatretus_burgeri
ENSMAMG00000005235	casc3	69	54.902	ENSEASG00005002909	CASC3	82	52.549	Equus_asinus_asinus
ENSMAMG00000005235	casc3	69	55.906	ENSECAG00000019947	CASC3	66	54.724	Equus_caballus
ENSMAMG00000005235	casc3	100	56.813	ENSELUG00000015093	casc3	95	54.904	Esox_lucius
ENSMAMG00000005235	casc3	76	52.769	ENSFCAG00000014998	CASC3	82	52.229	Felis_catus
ENSMAMG00000005235	casc3	76	47.883	ENSFALG00000000412	CASC3	80	53.448	Ficedula_albicollis
ENSMAMG00000005235	casc3	74	53.360	ENSFDAG00000020696	CASC3	82	52.964	Fukomys_damarensis
ENSMAMG00000005235	casc3	95	69.262	ENSFHEG00000015793	casc3	96	70.040	Fundulus_heteroclitus
ENSMAMG00000005235	casc3	75	50.473	ENSGALG00000031813	CASC3	78	52.917	Gallus_gallus
ENSMAMG00000005235	casc3	94	70.755	ENSGAFG00000017148	casc3	83	71.141	Gambusia_affinis
ENSMAMG00000005235	casc3	56	67.347	ENSGAGG00000008432	CASC3	84	54.259	Gopherus_agassizii
ENSMAMG00000005235	casc3	76	51.290	ENSGGOG00000005067	CASC3	75	52.756	Gorilla_gorilla
ENSMAMG00000005235	casc3	95	75.000	ENSHBUG00000013155	casc3	96	75.871	Haplochromis_burtoni
ENSMAMG00000005235	casc3	69	54.331	ENSHGLG00000012117	CASC3	80	52.201	Heterocephalus_glaber_female
ENSMAMG00000005235	casc3	68	53.878	ENSHGLG00100002268	CASC3	89	52.201	Heterocephalus_glaber_male
ENSMAMG00000005235	casc3	100	61.125	ENSHCOG00000002664	casc3	94	60.512	Hippocampus_comes
ENSMAMG00000005235	casc3	63	66.258	ENSSTOG00000006374	CASC3	77	53.150	Ictidomys_tridecemlineatus
ENSMAMG00000005235	casc3	73	56.250	ENSJJAG00000023525	Casc3	73	54.583	Jaculus_jaculus
ENSMAMG00000005235	casc3	93	72.423	ENSKMAG00000019507	casc3	99	72.326	Kryptolebias_marmoratus
ENSMAMG00000005235	casc3	96	72.294	ENSLBEG00000005435	casc3	96	72.680	Labrus_bergylta
ENSMAMG00000005235	casc3	69	48.071	ENSLACG00000013200	CASC3	83	50.313	Latimeria_chalumnae
ENSMAMG00000005235	casc3	99	48.669	ENSLOCG00000013518	casc3	62	67.773	Lepisosteus_oculatus
ENSMAMG00000005235	casc3	69	54.510	ENSLAFG00000000606	CASC3	75	52.140	Loxodonta_africana
ENSMAMG00000005235	casc3	69	55.118	ENSMFAG00000041496	CASC3	83	53.150	Macaca_fascicularis
ENSMAMG00000005235	casc3	69	55.118	ENSMMUG00000045187	CASC3	75	53.150	Macaca_mulatta
ENSMAMG00000005235	casc3	68	54.694	ENSMLEG00000029049	CASC3	83	52.653	Mandrillus_leucophaeus
ENSMAMG00000005235	casc3	95	74.866	ENSMZEG00005003815	casc3	96	75.737	Maylandia_zebra
ENSMAMG00000005235	casc3	63	58.738	ENSMGAG00000013247	CASC3	81	54.054	Meleagris_gallopavo
ENSMAMG00000005235	casc3	81	44.257	ENSMICG00000003321	CASC3	82	49.383	Microcebus_murinus
ENSMAMG00000005235	casc3	72	55.556	ENSMOCG00000013644	Casc3	73	54.468	Microtus_ochrogaster
ENSMAMG00000005235	casc3	100	70.588	ENSMMOG00000014339	casc3	96	69.159	Mola_mola
ENSMAMG00000005235	casc3	54	71.111	ENSMODG00000013044	CASC3	63	58.911	Monodelphis_domestica
ENSMAMG00000005235	casc3	62	95.000	ENSMALG00000019771	casc3	80	95.000	Monopterus_albus
ENSMAMG00000005235	casc3	74	57.265	MGP_CAROLIEiJ_G0017099	Casc3	82	52.548	Mus_caroli
ENSMAMG00000005235	casc3	76	55.118	ENSMUSG00000078676	Casc3	82	52.229	Mus_musculus
ENSMAMG00000005235	casc3	74	56.838	MGP_SPRETEiJ_G0017943	Casc3	75	54.510	Mus_spretus
ENSMAMG00000005235	casc3	93	45.161	ENSMPUG00000014903	CASC3	75	54.331	Mustela_putorius_furo
ENSMAMG00000005235	casc3	69	55.118	ENSMLUG00000010520	CASC3	75	52.756	Myotis_lucifugus
ENSMAMG00000005235	casc3	76	51.466	ENSNGAG00000023121	Casc3	82	51.118	Nannospalax_galili
ENSMAMG00000005235	casc3	69	55.118	ENSNLEG00000001598	CASC3	75	53.543	Nomascus_leucogenys
ENSMAMG00000005235	casc3	69	56.299	ENSODEG00000017858	CASC3	75	54.902	Octodon_degus
ENSMAMG00000005235	casc3	95	73.522	ENSONIG00000009337	casc3	96	75.167	Oreochromis_niloticus
ENSMAMG00000005235	casc3	91	43.520	ENSOCUG00000002954	CASC3	76	53.150	Oryctolagus_cuniculus
ENSMAMG00000005235	casc3	96	63.770	ENSORLG00000023125	casc3	96	65.241	Oryzias_latipes
ENSMAMG00000005235	casc3	69	55.118	ENSOGAG00000034486	CASC3	74	52.756	Otolemur_garnettii
ENSMAMG00000005235	casc3	76	52.581	ENSOARG00000013239	CASC3	75	53.150	Ovis_aries
ENSMAMG00000005235	casc3	69	54.724	ENSPPAG00000035069	CASC3	75	52.756	Pan_paniscus
ENSMAMG00000005235	casc3	76	52.769	ENSPPRG00000023670	CASC3	82	52.229	Panthera_pardus
ENSMAMG00000005235	casc3	69	53.488	ENSPTIG00000010891	CASC3	75	52.713	Panthera_tigris_altaica
ENSMAMG00000005235	casc3	69	55.118	ENSPANG00000021708	CASC3	75	53.150	Papio_anubis
ENSMAMG00000005235	casc3	76	52.412	ENSPCIG00000025678	CASC3	82	53.968	Phascolarctos_cinereus
ENSMAMG00000005235	casc3	95	67.336	ENSPFOG00000017632	casc3	96	71.479	Poecilia_formosa
ENSMAMG00000005235	casc3	96	71.771	ENSPLAG00000005268	casc3	96	71.979	Poecilia_latipinna
ENSMAMG00000005235	casc3	51	86.232	ENSPMEG00000010299	casc3	67	86.232	Poecilia_mexicana
ENSMAMG00000005235	casc3	79	74.434	ENSPREG00000011856	casc3	91	73.786	Poecilia_reticulata
ENSMAMG00000005235	casc3	69	53.937	ENSPPYG00000008467	CASC3	75	52.548	Pongo_abelii
ENSMAMG00000005235	casc3	81	44.190	ENSPCOG00000008183	CASC3	75	53.175	Propithecus_coquereli
ENSMAMG00000005235	casc3	95	75.134	ENSPNYG00000011962	casc3	96	76.005	Pundamilia_nyererei
ENSMAMG00000005235	casc3	79	49.563	ENSRNOG00000009716	Casc3	82	53.725	Rattus_norvegicus
ENSMAMG00000005235	casc3	69	55.118	ENSRBIG00000033289	CASC3	76	51.852	Rhinopithecus_bieti
ENSMAMG00000005235	casc3	69	55.118	ENSRROG00000022337	CASC3	75	53.150	Rhinopithecus_roxellana
ENSMAMG00000005235	casc3	67	55.085	ENSSBOG00000031406	CASC3	82	52.966	Saimiri_boliviensis_boliviensis
ENSMAMG00000005235	casc3	68	53.698	ENSSHAG00000013338	CASC3	83	54.062	Sarcophilus_harrisii
ENSMAMG00000005235	casc3	96	68.855	ENSSMAG00000016096	casc3	96	70.475	Scophthalmus_maximus
ENSMAMG00000005235	casc3	96	76.127	ENSSDUG00000016893	casc3	91	78.117	Seriola_dumerili
ENSMAMG00000005235	casc3	78	78.212	ENSSLDG00000020308	casc3	93	79.609	Seriola_lalandi_dorsalis
ENSMAMG00000005235	casc3	51	67.606	ENSSARG00000010378	CASC3	64	67.606	Sorex_araneus
ENSMAMG00000005235	casc3	96	75.697	ENSSPAG00000023008	casc3	96	75.661	Stegastes_partitus
ENSMAMG00000005235	casc3	68	55.102	ENSSSCG00000017477	CASC3	72	65.031	Sus_scrofa
ENSMAMG00000005235	casc3	57	56.129	ENSTGUG00000002300	CASC3	77	67.327	Taeniopygia_guttata
ENSMAMG00000005235	casc3	96	67.470	ENSTRUG00000000673	casc3	95	65.462	Takifugu_rubripes
ENSMAMG00000005235	casc3	96	61.148	ENSTNIG00000003208	casc3	53	67.989	Tetraodon_nigroviridis
ENSMAMG00000005235	casc3	69	54.118	ENSUAMG00000015116	CASC3	83	51.765	Ursus_americanus
ENSMAMG00000005235	casc3	68	53.878	ENSUMAG00000017697	CASC3	89	63.190	Ursus_maritimus
ENSMAMG00000005235	casc3	96	72.053	ENSXMAG00000013937	casc3	96	72.090	Xiphophorus_maculatus