EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000005509 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 3482 bases
Position: chrOOHQ01000035.1:18358650-18362131
Accession: 113134176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000008097	La	PF05383.17	9.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000008315	-	1215	XM_026313413	ENSMAMP00000008097	404 (aa)	XP_026169198	-

Gene Model

Click here to download ENSMAMG00000005509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000005509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000005509	-	50	39.130	ENSMAMG00000005261	larp6a	57	31.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000005509	-	93	59.894	ENSAPOG00000003568	-	98	59.894	Acanthochromis_polyacanthus
ENSMAMG00000005509	-	91	62.873	ENSACIG00000008349	-	85	62.873	Amphilophus_citrinellus
ENSMAMG00000005509	-	92	65.957	ENSAOCG00000004646	larp6b	95	65.957	Amphiprion_ocellaris
ENSMAMG00000005509	-	93	64.456	ENSAPEG00000022748	-	95	64.456	Amphiprion_percula
ENSMAMG00000005509	-	92	71.809	ENSATEG00000021222	-	94	71.809	Anabas_testudineus
ENSMAMG00000005509	-	91	62.398	ENSACLG00000009988	larp6b	92	62.973	Astatotilapia_calliptera
ENSMAMG00000005509	-	50	54.146	ENSAMXG00000018956	larp6b	87	38.663	Astyanax_mexicanus
ENSMAMG00000005509	-	88	50.278	ENSCVAG00000012145	-	88	50.278	Cyprinodon_variegatus
ENSMAMG00000005509	-	86	36.855	ENSDARG00000003968	larp6b	86	36.855	Danio_rerio
ENSMAMG00000005509	-	92	36.806	ENSELUG00000021677	larp6b	89	36.806	Esox_lucius
ENSMAMG00000005509	-	92	54.692	ENSFHEG00000010409	-	86	54.692	Fundulus_heteroclitus
ENSMAMG00000005509	-	90	57.143	ENSGAFG00000020138	-	88	57.143	Gambusia_affinis
ENSMAMG00000005509	-	94	60.789	ENSHBUG00000012344	larp6b	94	61.358	Haplochromis_burtoni
ENSMAMG00000005509	-	59	45.643	ENSIPUG00000007609	larp6b	87	37.198	Ictalurus_punctatus
ENSMAMG00000005509	-	91	65.041	ENSLBEG00000016460	-	99	65.041	Labrus_bergylta
ENSMAMG00000005509	-	91	62.125	ENSMZEG00005024390	larp6b	92	62.703	Maylandia_zebra
ENSMAMG00000005509	-	93	60.847	ENSNBRG00000012748	larp6b	94	60.847	Neolamprologus_brichardi
ENSMAMG00000005509	-	87	38.725	ENSPKIG00000025605	larp6b	84	38.575	Paramormyrops_kingsleyae
ENSMAMG00000005509	-	90	56.474	ENSPLAG00000005133	-	97	56.474	Poecilia_latipinna
ENSMAMG00000005509	-	90	56.474	ENSPMEG00000019947	-	98	56.474	Poecilia_mexicana
ENSMAMG00000005509	-	91	57.027	ENSPREG00000011853	-	88	57.027	Poecilia_reticulata
ENSMAMG00000005509	-	90	60.647	ENSPNYG00000007025	larp6b	89	61.230	Pundamilia_nyererei
ENSMAMG00000005509	-	86	38.592	ENSPNAG00000023854	larp6b	85	38.592	Pygocentrus_nattereri
ENSMAMG00000005509	-	69	76.157	ENSSDUG00000009842	-	87	75.601	Seriola_dumerili
ENSMAMG00000005509	-	86	73.714	ENSSLDG00000017081	-	81	73.714	Seriola_lalandi_dorsalis
ENSMAMG00000005509	-	88	63.488	ENSSPAG00000014320	-	88	64.850	Stegastes_partitus
ENSMAMG00000005509	-	91	56.011	ENSXCOG00000018917	-	93	56.011	Xiphophorus_couchianus
ENSMAMG00000005509	-	91	55.827	ENSXMAG00000025734	-	95	55.827	Xiphophorus_maculatus