EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000005559 (Gene tree)
Gene ID: 113126980
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 10667 bases
Position: chrOOHQ01000103.1:17519642-17530308
Accession: 113126980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000008210	DEAD	PF00270.29	2.3e-42	1	1
ENSMAMP00000008231	DEAD	PF00270.29	5.1e-26	1	2
ENSMAMP00000008231	DEAD	PF00270.29	5.1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000008452	-	1326	-	ENSMAMP00000008231	441 (aa)	-	-
ENSMAMT00000008429	-	7007	-	ENSMAMP00000008210	490 (aa)	XP_026156944	UPI000E463DC1

Gene Model

Click here to download ENSMAMG00000005559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000005559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000005559	-	81	35.500	ENSMAMG00000000971	ddx39aa	93	35.500
ENSMAMG00000005559	-	76	31.159	ENSMAMG00000024144	ddx23	53	31.159
ENSMAMG00000005559	-	72	36.314	ENSMAMG00000004449	zgc:193690	79	36.314
ENSMAMG00000005559	-	77	37.302	ENSMAMG00000017369	eif4a3	92	37.302
ENSMAMG00000005559	-	71	32.778	ENSMAMG00000008427	si:dkey-156n14.5	56	32.778
ENSMAMG00000005559	-	97	80.287	ENSMAMG00000013732	ddx6	99	81.352
ENSMAMG00000005559	-	70	34.857	ENSMAMG00000022128	ddx43	51	34.857
ENSMAMG00000005559	-	79	30.982	ENSMAMG00000006297	ddx49	83	30.982
ENSMAMG00000005559	-	80	35.840	ENSMAMG00000009916	DDX39A	93	35.840
ENSMAMG00000005559	-	67	31.339	ENSMAMG00000011297	ddx55	58	31.624
ENSMAMG00000005559	-	72	30.556	ENSMAMG00000009174	ddx27	51	30.556
ENSMAMG00000005559	-	75	39.247	ENSMAMG00000000754	eif4a1b	92	39.247
ENSMAMG00000005559	-	62	30.864	ENSMAMG00000003574	ddx4	80	30.864
ENSMAMG00000005559	-	71	40.741	ENSMAMG00000013070	-	60	30.641
ENSMAMG00000005559	-	74	30.376	ENSMAMG00000019719	ddx52	55	30.376
ENSMAMG00000005559	-	70	37.047	ENSMAMG00000016547	ddx19	76	37.047
ENSMAMG00000005559	-	75	40.054	ENSMAMG00000002729	eif4a2	90	40.054
ENSMAMG00000005559	-	77	30.155	ENSMAMG00000002727	ddx59	60	30.155
ENSMAMG00000005559	-	65	31.003	ENSMAMG00000009100	ddx18	54	31.003
ENSMAMG00000005559	-	98	87.164	ENSMAMG00000005321	ddx61	99	87.164
ENSMAMG00000005559	-	71	32.500	ENSMAMG00000007912	-	56	32.500
ENSMAMG00000005559	-	76	30.628	ENSMAMG00000016568	DDX5	57	31.233
ENSMAMG00000005559	-	82	31.566	ENSMAMG00000008915	ddx47	85	31.566
ENSMAMG00000005559	-	68	40.678	ENSMAMG00000015916	ddx1	53	40.678
ENSMAMG00000005559	-	75	30.287	ENSMAMG00000008781	ddx5	55	32.164
ENSMAMG00000005559	-	71	40.741	ENSMAMG00000021938	-	55	31.592
ENSMAMG00000005559	-	79	34.171	ENSMAMG00000009654	ddx20	50	34.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000005559	-	77	98.400	ENSAPOG00000023627	-	95	98.400	Acanthochromis_polyacanthus
ENSMAMG00000005559	-	98	86.364	ENSAPOG00000014829	ddx61	99	86.364	Acanthochromis_polyacanthus
ENSMAMG00000005559	-	100	88.776	ENSACIG00000018355	-	100	88.776	Amphilophus_citrinellus
ENSMAMG00000005559	-	98	87.164	ENSAOCG00000007627	ddx61	99	87.164	Amphiprion_ocellaris
ENSMAMG00000005559	-	100	96.735	ENSAOCG00000006269	-	100	96.735	Amphiprion_ocellaris
ENSMAMG00000005559	-	100	96.735	ENSAPEG00000021368	-	100	96.735	Amphiprion_percula
ENSMAMG00000005559	-	98	87.164	ENSAPEG00000007293	ddx61	99	87.164	Amphiprion_percula
ENSMAMG00000005559	-	100	96.735	ENSAPEG00000020642	-	100	96.735	Amphiprion_percula
ENSMAMG00000005559	-	100	95.918	ENSATEG00000005424	-	100	95.918	Anabas_testudineus
ENSMAMG00000005559	-	97	87.764	ENSATEG00000011302	ddx61	98	87.764	Anabas_testudineus
ENSMAMG00000005559	-	98	86.957	ENSACLG00000027620	ddx61	99	86.957	Astatotilapia_calliptera
ENSMAMG00000005559	-	100	95.918	ENSACLG00000003260	-	100	95.918	Astatotilapia_calliptera
ENSMAMG00000005559	-	99	87.500	ENSAMXG00000033980	-	100	87.500	Astyanax_mexicanus
ENSMAMG00000005559	-	97	87.841	ENSAMXG00000032542	ddx61	99	87.064	Astyanax_mexicanus
ENSMAMG00000005559	-	100	93.878	ENSCSEG00000009893	-	100	93.878	Cynoglossus_semilaevis
ENSMAMG00000005559	-	100	91.837	ENSCVAG00000011006	-	100	91.837	Cyprinodon_variegatus
ENSMAMG00000005559	-	99	86.270	ENSDARG00000018425	ddx61	99	86.270	Danio_rerio
ENSMAMG00000005559	-	98	89.397	ENSELUG00000020545	ddx61	98	89.397	Esox_lucius
ENSMAMG00000005559	-	99	89.206	ENSELUG00000022538	-	99	89.206	Esox_lucius
ENSMAMG00000005559	-	100	91.429	ENSFHEG00000015487	-	100	91.429	Fundulus_heteroclitus
ENSMAMG00000005559	-	96	87.866	ENSGMOG00000013762	ddx61	100	86.831	Gadus_morhua
ENSMAMG00000005559	-	66	86.585	ENSGMOG00000003561	-	100	87.273	Gadus_morhua
ENSMAMG00000005559	-	100	91.853	ENSGAFG00000015865	-	100	91.853	Gambusia_affinis
ENSMAMG00000005559	-	99	94.835	ENSGACG00000002413	-	100	94.835	Gasterosteus_aculeatus
ENSMAMG00000005559	-	98	85.223	ENSGACG00000003401	ddx61	100	85.223	Gasterosteus_aculeatus
ENSMAMG00000005559	-	98	87.164	ENSHBUG00000017832	ddx61	99	87.164	Haplochromis_burtoni
ENSMAMG00000005559	-	100	95.918	ENSHBUG00000017033	-	100	95.918	Haplochromis_burtoni
ENSMAMG00000005559	-	100	90.204	ENSHCOG00000012238	-	100	90.204	Hippocampus_comes
ENSMAMG00000005559	-	97	84.355	ENSHCOG00000008184	ddx61	97	84.355	Hippocampus_comes
ENSMAMG00000005559	-	96	87.789	ENSIPUG00000008367	-	100	86.242	Ictalurus_punctatus
ENSMAMG00000005559	-	96	87.207	ENSIPUG00000012823	DDX6	99	85.892	Ictalurus_punctatus
ENSMAMG00000005559	-	100	94.082	ENSKMAG00000007213	-	100	94.082	Kryptolebias_marmoratus
ENSMAMG00000005559	-	100	93.973	ENSLBEG00000016890	-	100	93.973	Labrus_bergylta
ENSMAMG00000005559	-	97	88.000	ENSLBEG00000001740	ddx61	98	88.000	Labrus_bergylta
ENSMAMG00000005559	-	97	83.505	ENSLACG00000015214	ddx61	100	83.505	Latimeria_chalumnae
ENSMAMG00000005559	-	98	50.228	ENSLOCG00000004352	ddx61	98	50.113	Lepisosteus_oculatus
ENSMAMG00000005559	-	98	87.164	ENSMZEG00005003556	ddx61	99	87.164	Maylandia_zebra
ENSMAMG00000005559	-	100	95.918	ENSMZEG00005026268	-	100	95.918	Maylandia_zebra
ENSMAMG00000005559	-	96	86.383	ENSMMOG00000007415	ddx61	97	86.383	Mola_mola
ENSMAMG00000005559	-	100	94.785	ENSMMOG00000013694	-	100	94.785	Mola_mola
ENSMAMG00000005559	-	72	76.771	ENSMMOG00000008825	-	92	76.771	Mola_mola
ENSMAMG00000005559	-	98	75.565	ENSMALG00000013776	ddx61	97	75.565	Monopterus_albus
ENSMAMG00000005559	-	100	95.714	ENSMALG00000013817	-	100	95.714	Monopterus_albus
ENSMAMG00000005559	-	98	80.585	ENSNBRG00000015800	ddx61	99	80.585	Neolamprologus_brichardi
ENSMAMG00000005559	-	100	88.776	ENSNBRG00000015075	-	100	88.776	Neolamprologus_brichardi
ENSMAMG00000005559	-	100	95.918	ENSONIG00000013748	-	100	95.918	Oreochromis_niloticus
ENSMAMG00000005559	-	98	87.474	ENSONIG00000011418	ddx61	99	87.474	Oreochromis_niloticus
ENSMAMG00000005559	-	100	92.857	ENSORLG00000009178	-	100	92.857	Oryzias_latipes
ENSMAMG00000005559	-	100	92.857	ENSORLG00020015515	-	100	92.857	Oryzias_latipes_hni
ENSMAMG00000005559	-	100	92.653	ENSORLG00015006764	-	100	92.653	Oryzias_latipes_hsok
ENSMAMG00000005559	-	96	95.047	ENSOMEG00000022326	-	99	95.047	Oryzias_melastigma
ENSMAMG00000005559	-	97	90.356	ENSPKIG00000024264	ddx61	99	88.571	Paramormyrops_kingsleyae
ENSMAMG00000005559	-	100	83.878	ENSPMGG00000013355	-	100	83.878	Periophthalmus_magnuspinnatus
ENSMAMG00000005559	-	100	92.449	ENSPFOG00000005750	-	100	92.449	Poecilia_formosa
ENSMAMG00000005559	-	100	92.449	ENSPLAG00000000403	-	100	92.449	Poecilia_latipinna
ENSMAMG00000005559	-	100	92.041	ENSPMEG00000023737	-	100	92.041	Poecilia_mexicana
ENSMAMG00000005559	-	98	80.962	ENSPNYG00000015045	ddx61	99	80.962	Pundamilia_nyererei
ENSMAMG00000005559	-	100	95.918	ENSPNYG00000003986	-	100	95.918	Pundamilia_nyererei
ENSMAMG00000005559	-	99	88.032	ENSPNAG00000008742	-	100	88.032	Pygocentrus_nattereri
ENSMAMG00000005559	-	98	87.734	ENSPNAG00000024072	ddx61	99	87.734	Pygocentrus_nattereri
ENSMAMG00000005559	-	96	89.241	ENSSFOG00015021404	ddx61	99	87.551	Scleropages_formosus
ENSMAMG00000005559	-	100	94.082	ENSSMAG00000001793	-	100	94.082	Scophthalmus_maximus
ENSMAMG00000005559	-	96	87.447	ENSSMAG00000006591	ddx61	97	86.765	Scophthalmus_maximus
ENSMAMG00000005559	-	96	88.511	ENSSDUG00000009713	ddx61	99	86.957	Seriola_dumerili
ENSMAMG00000005559	-	100	96.939	ENSSDUG00000007530	-	100	96.939	Seriola_dumerili
ENSMAMG00000005559	-	96	88.511	ENSSLDG00000000132	ddx61	99	86.957	Seriola_lalandi_dorsalis
ENSMAMG00000005559	-	100	96.939	ENSSLDG00000007608	-	100	96.939	Seriola_lalandi_dorsalis
ENSMAMG00000005559	-	100	97.347	ENSSPAG00000013878	-	100	97.347	Stegastes_partitus
ENSMAMG00000005559	-	96	89.126	ENSSPAG00000001578	ddx61	99	87.552	Stegastes_partitus
ENSMAMG00000005559	-	99	91.207	ENSTRUG00000012432	-	99	91.207	Takifugu_rubripes
ENSMAMG00000005559	-	98	91.684	ENSTNIG00000003560	-	100	91.684	Tetraodon_nigroviridis
ENSMAMG00000005559	-	100	91.855	ENSXCOG00000001406	-	100	91.855	Xiphophorus_couchianus
ENSMAMG00000005559	-	100	92.261	ENSXMAG00000016090	-	100	92.261	Xiphophorus_maculatus