EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000006312 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 18189 bases
Position: chrOOHQ01000044.1:3339660-3357848
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	1	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	2	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	3	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	4	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	5	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	6	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	7	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	8	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	9	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	10	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	11	12
ENSMAMP00000009516	zf-C2H2	PF00096.26	4.1e-65	12	12
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	1	9
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	2	9
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	3	9
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	4	9
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	5	9
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	6	9
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	7	9
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	8	9
ENSMAMP00000009443	zf-C2H2	PF00096.26	7.9e-51	9	9
ENSMAMP00000009501	zf-C2H2	PF00096.26	6.7e-42	1	7
ENSMAMP00000009501	zf-C2H2	PF00096.26	6.7e-42	2	7
ENSMAMP00000009501	zf-C2H2	PF00096.26	6.7e-42	3	7
ENSMAMP00000009501	zf-C2H2	PF00096.26	6.7e-42	4	7
ENSMAMP00000009501	zf-C2H2	PF00096.26	6.7e-42	5	7
ENSMAMP00000009501	zf-C2H2	PF00096.26	6.7e-42	6	7
ENSMAMP00000009501	zf-C2H2	PF00096.26	6.7e-42	7	7
ENSMAMP00000009522	zf-C2H2	PF00096.26	1.6e-34	1	6
ENSMAMP00000009522	zf-C2H2	PF00096.26	1.6e-34	2	6
ENSMAMP00000009522	zf-C2H2	PF00096.26	1.6e-34	3	6
ENSMAMP00000009522	zf-C2H2	PF00096.26	1.6e-34	4	6
ENSMAMP00000009522	zf-C2H2	PF00096.26	1.6e-34	5	6
ENSMAMP00000009522	zf-C2H2	PF00096.26	1.6e-34	6	6
ENSMAMP00000009431	zf-C2H2	PF00096.26	3.4e-33	1	6
ENSMAMP00000009431	zf-C2H2	PF00096.26	3.4e-33	2	6
ENSMAMP00000009431	zf-C2H2	PF00096.26	3.4e-33	3	6
ENSMAMP00000009431	zf-C2H2	PF00096.26	3.4e-33	4	6
ENSMAMP00000009431	zf-C2H2	PF00096.26	3.4e-33	5	6
ENSMAMP00000009431	zf-C2H2	PF00096.26	3.4e-33	6	6
ENSMAMP00000009516	zf-met	PF12874.7	4e-19	1	1
ENSMAMP00000009443	zf-met	PF12874.7	6.2e-18	1	2
ENSMAMP00000009443	zf-met	PF12874.7	6.2e-18	2	2
ENSMAMP00000009501	zf-met	PF12874.7	1.6e-14	1	2
ENSMAMP00000009501	zf-met	PF12874.7	1.6e-14	2	2
ENSMAMP00000009431	zf-met	PF12874.7	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000009749	-	1062	-	ENSMAMP00000009501	353 (aa)	-	-
ENSMAMT00000009690	-	1185	-	ENSMAMP00000009443	394 (aa)	-	-
ENSMAMT00000009770	-	2682	-	ENSMAMP00000009522	803 (aa)	-	-
ENSMAMT00000009678	-	897	-	ENSMAMP00000009431	298 (aa)	-	-
ENSMAMT00000009764	-	1335	-	ENSMAMP00000009516	444 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000006312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000006312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000006312	-	96	40.000	ENSMAMG00000014734	-	54	46.602
ENSMAMG00000006312	-	92	37.681	ENSMAMG00000016484	-	99	40.769
ENSMAMG00000006312	-	90	41.772	ENSMAMG00000021196	zgc:171929	67	46.939
ENSMAMG00000006312	-	97	44.361	ENSMAMG00000022502	-	91	54.054
ENSMAMG00000006312	-	92	47.778	ENSMAMG00000023490	-	59	40.361
ENSMAMG00000006312	-	93	33.212	ENSMAMG00000001213	znf710b	56	33.212
ENSMAMG00000006312	-	92	46.073	ENSMAMG00000016087	-	97	45.665
ENSMAMG00000006312	-	95	41.860	ENSMAMG00000017939	-	93	45.294
ENSMAMG00000006312	-	78	33.333	ENSMAMG00000004457	PRDM15	59	31.361
ENSMAMG00000006312	-	97	42.553	ENSMAMG00000014743	-	56	42.202
ENSMAMG00000006312	-	85	32.990	ENSMAMG00000009604	si:dkey-89b17.4	82	32.740
ENSMAMG00000006312	-	90	41.905	ENSMAMG00000015632	snai2	76	41.905
ENSMAMG00000006312	-	89	48.936	ENSMAMG00000022145	-	82	48.936
ENSMAMG00000006312	-	96	40.777	ENSMAMG00000022147	-	67	43.939
ENSMAMG00000006312	-	92	37.433	ENSMAMG00000019385	-	76	37.433
ENSMAMG00000006312	-	93	41.071	ENSMAMG00000020994	snai1a	50	41.284
ENSMAMG00000006312	-	96	39.572	ENSMAMG00000019301	-	99	41.379
ENSMAMG00000006312	-	99	43.686	ENSMAMG00000013025	-	51	46.429
ENSMAMG00000006312	-	92	43.750	ENSMAMG00000009051	-	99	42.077
ENSMAMG00000006312	-	97	36.364	ENSMAMG00000009313	znf646	80	36.264
ENSMAMG00000006312	-	98	43.925	ENSMAMG00000001157	znf236	74	40.625
ENSMAMG00000006312	-	92	39.306	ENSMAMG00000008125	gfi1ab	50	39.306
ENSMAMG00000006312	-	92	41.212	ENSMAMG00000003040	gfi1b	78	39.881
ENSMAMG00000006312	-	93	46.000	ENSMAMG00000008000	znf341	64	32.558
ENSMAMG00000006312	-	88	44.860	ENSMAMG00000004896	gfi1aa	53	44.860
ENSMAMG00000006312	-	99	38.728	ENSMAMG00000001808	zbtb47b	79	38.728
ENSMAMG00000006312	-	93	38.202	ENSMAMG00000010384	-	67	38.202
ENSMAMG00000006312	-	91	47.826	ENSMAMG00000020468	-	51	39.062
ENSMAMG00000006312	-	94	35.787	ENSMAMG00000015087	znf319b	89	35.979
ENSMAMG00000006312	-	92	47.778	ENSMAMG00000023492	-	59	36.957
ENSMAMG00000006312	-	95	47.027	ENSMAMG00000018114	-	86	45.000
ENSMAMG00000006312	-	92	46.835	ENSMAMG00000015434	-	95	49.351
ENSMAMG00000006312	-	91	37.079	ENSMAMG00000011698	scrt1b	77	33.803
ENSMAMG00000006312	-	93	46.341	ENSMAMG00000002731	znf1056	89	46.341
ENSMAMG00000006312	-	87	49.315	ENSMAMG00000017946	-	89	48.684
ENSMAMG00000006312	-	92	42.857	ENSMAMG00000015863	-	86	42.500
ENSMAMG00000006312	-	93	39.698	ENSMAMG00000007046	-	53	40.741
ENSMAMG00000006312	-	92	44.444	ENSMAMG00000014758	-	83	48.756
ENSMAMG00000006312	-	92	35.945	ENSMAMG00000002166	zbtb41	63	34.496
ENSMAMG00000006312	-	94	46.552	ENSMAMG00000002083	-	95	45.455
ENSMAMG00000006312	-	95	34.815	ENSMAMG00000018536	-	64	40.541
ENSMAMG00000006312	-	94	42.857	ENSMAMG00000014896	wt1a	55	43.137
ENSMAMG00000006312	-	94	33.493	ENSMAMG00000018743	-	81	37.226
ENSMAMG00000006312	-	97	39.720	ENSMAMG00000022206	-	77	39.720
ENSMAMG00000006312	-	93	43.500	ENSMAMG00000010902	-	67	41.176
ENSMAMG00000006312	-	93	36.184	ENSMAMG00000013419	prdm5	89	34.049
ENSMAMG00000006312	-	90	39.726	ENSMAMG00000001291	scrt2	51	39.423
ENSMAMG00000006312	-	96	41.045	ENSMAMG00000015670	-	73	41.045
ENSMAMG00000006312	-	92	44.048	ENSMAMG00000016519	-	91	40.476
ENSMAMG00000006312	-	96	32.484	ENSMAMG00000016634	si:ch211-216l23.1	95	32.484
ENSMAMG00000006312	-	91	36.364	ENSMAMG00000009768	ovol1a	72	41.975
ENSMAMG00000006312	-	95	33.803	ENSMAMG00000023622	-	99	33.803
ENSMAMG00000006312	-	93	39.677	ENSMAMG00000009817	-	89	47.692
ENSMAMG00000006312	-	92	46.707	ENSMAMG00000018071	-	56	42.857
ENSMAMG00000006312	-	95	48.227	ENSMAMG00000016119	-	88	47.521
ENSMAMG00000006312	-	96	39.524	ENSMAMG00000009555	-	54	42.735
ENSMAMG00000006312	-	93	39.237	ENSMAMG00000018137	-	65	37.791
ENSMAMG00000006312	-	98	47.210	ENSMAMG00000022154	-	61	49.275
ENSMAMG00000006312	-	92	43.750	ENSMAMG00000022152	-	61	47.340
ENSMAMG00000006312	-	91	47.778	ENSMAMG00000022150	-	50	47.778
ENSMAMG00000006312	-	90	45.098	ENSMAMG00000016542	-	74	43.443
ENSMAMG00000006312	-	92	38.462	ENSMAMG00000014051	znf384l	53	38.037
ENSMAMG00000006312	-	92	40.569	ENSMAMG00000007352	-	99	40.467
ENSMAMG00000006312	-	92	37.135	ENSMAMG00000017911	ZNF319	96	38.000
ENSMAMG00000006312	-	98	45.000	ENSMAMG00000004684	znf526	62	50.000
ENSMAMG00000006312	-	92	44.681	ENSMAMG00000000789	-	80	39.738
ENSMAMG00000006312	-	92	30.542	ENSMAMG00000023652	patz1	53	33.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000006312	-	100	96.512	ENSAPOG00000002213	-	90	96.512	Acanthochromis_polyacanthus
ENSMAMG00000006312	-	92	41.896	ENSACIG00000013149	-	85	80.357	Amphilophus_citrinellus
ENSMAMG00000006312	-	98	80.805	ENSACIG00000013163	-	92	85.650	Amphilophus_citrinellus
ENSMAMG00000006312	-	100	96.512	ENSAOCG00000013124	-	90	96.512	Amphiprion_ocellaris
ENSMAMG00000006312	-	100	96.512	ENSAPEG00000009997	-	90	96.512	Amphiprion_percula
ENSMAMG00000006312	-	100	89.753	ENSATEG00000004127	-	98	87.200	Anabas_testudineus
ENSMAMG00000006312	-	100	92.000	ENSACLG00000005708	-	95	89.091	Astatotilapia_calliptera
ENSMAMG00000006312	-	92	73.448	ENSCVAG00000014734	-	97	77.500	Cyprinodon_variegatus
ENSMAMG00000006312	-	80	92.593	ENSFHEG00000014060	-	73	92.593	Fundulus_heteroclitus
ENSMAMG00000006312	-	84	81.624	ENSGMOG00000017526	-	98	81.624	Gadus_morhua
ENSMAMG00000006312	-	100	87.273	ENSGAFG00000011174	-	95	87.273	Gambusia_affinis
ENSMAMG00000006312	-	100	69.048	ENSGACG00000019550	-	99	94.304	Gasterosteus_aculeatus
ENSMAMG00000006312	-	100	92.000	ENSHBUG00000006662	-	95	89.091	Haplochromis_burtoni
ENSMAMG00000006312	-	93	85.171	ENSHCOG00000003041	-	94	82.186	Hippocampus_comes
ENSMAMG00000006312	-	100	96.512	ENSKMAG00000009979	-	92	96.512	Kryptolebias_marmoratus
ENSMAMG00000006312	-	100	96.538	ENSLBEG00000010165	-	89	89.619	Labrus_bergylta
ENSMAMG00000006312	-	100	92.000	ENSMZEG00005013913	-	95	89.091	Maylandia_zebra
ENSMAMG00000006312	-	94	90.698	ENSMMOG00000011282	-	95	89.069	Mola_mola
ENSMAMG00000006312	-	100	98.456	ENSMALG00000000494	-	90	98.456	Monopterus_albus
ENSMAMG00000006312	-	90	74.359	ENSNBRG00000007602	-	85	74.359	Neolamprologus_brichardi
ENSMAMG00000006312	-	92	55.369	ENSONIG00000003856	-	100	92.073	Oreochromis_niloticus
ENSMAMG00000006312	-	100	91.822	ENSORLG00000010117	-	95	78.125	Oryzias_latipes
ENSMAMG00000006312	-	100	93.893	ENSORLG00020000219	-	90	93.893	Oryzias_latipes_hni
ENSMAMG00000006312	-	100	93.511	ENSORLG00015000258	-	99	89.565	Oryzias_latipes_hsok
ENSMAMG00000006312	-	100	93.893	ENSOMEG00000018262	-	94	87.500	Oryzias_melastigma
ENSMAMG00000006312	-	100	70.400	ENSPFOG00000013455	-	99	84.756	Poecilia_formosa
ENSMAMG00000006312	-	97	89.568	ENSPLAG00000004027	-	93	87.273	Poecilia_latipinna
ENSMAMG00000006312	-	100	94.231	ENSPMEG00000007589	-	90	94.231	Poecilia_mexicana
ENSMAMG00000006312	-	79	91.026	ENSPREG00000000153	-	95	91.026	Poecilia_reticulata
ENSMAMG00000006312	-	100	96.070	ENSPNYG00000007814	-	99	96.070	Pundamilia_nyererei
ENSMAMG00000006312	-	89	65.929	ENSPNYG00000007781	-	99	82.650	Pundamilia_nyererei
ENSMAMG00000006312	-	100	97.308	ENSSMAG00000021251	-	94	95.210	Scophthalmus_maximus
ENSMAMG00000006312	-	99	98.077	ENSSDUG00000013904	-	90	98.077	Seriola_dumerili
ENSMAMG00000006312	-	99	97.692	ENSSLDG00000006994	-	90	97.692	Seriola_lalandi_dorsalis
ENSMAMG00000006312	-	100	96.512	ENSSPAG00000011524	-	90	96.512	Stegastes_partitus
ENSMAMG00000006312	-	100	75.969	ENSTRUG00000015687	-	95	88.272	Takifugu_rubripes
ENSMAMG00000006312	-	94	83.381	ENSTNIG00000008242	-	99	81.590	Tetraodon_nigroviridis
ENSMAMG00000006312	-	97	70.637	ENSXCOG00000015947	-	95	77.273	Xiphophorus_couchianus
ENSMAMG00000006312	-	100	88.849	ENSXMAG00000023291	-	90	88.849	Xiphophorus_maculatus