EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000006610 (Gene tree)
Gene ID: 113133314
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8074 bases
Position: chrOOHQ01000074.1:22992403-23000476
Accession: 113133314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000009870	PRP4	PF08799.11	1.1e-13	1	1
ENSMAMP00000009845	PRP4	PF08799.11	2.9e-13	1	1
ENSMAMP00000009823	PRP4	PF08799.11	3e-13	1	1
ENSMAMP00000009823	Prp18	PF02840.15	6.5e-62	1	1
ENSMAMP00000009845	Prp18	PF02840.15	6.5e-62	1	1
ENSMAMP00000009870	Prp18	PF02840.15	5.5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000010075	-	4419	-	ENSMAMP00000009823	350 (aa)	XP_026167842	UPI000E460D55
ENSMAMT00000010099	-	4392	-	ENSMAMP00000009845	341 (aa)	XP_026167843	UPI000E457A16
ENSMAMT00000010124	-	1002	-	ENSMAMP00000009870	333 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000006610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000006610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000006610	prpf18	100	83.626	ENSG00000165630	PRPF18	100	83.626	Homo_sapiens
ENSMAMG00000006610	prpf18	100	95.429	ENSAPOG00000024177	prpf18	100	95.429	Acanthochromis_polyacanthus
ENSMAMG00000006610	prpf18	100	83.041	ENSAMEG00000013591	-	100	83.041	Ailuropoda_melanoleuca
ENSMAMG00000006610	prpf18	100	94.135	ENSACIG00000001186	prpf18	100	94.135	Amphilophus_citrinellus
ENSMAMG00000006610	prpf18	98	94.910	ENSAOCG00000006572	prpf18	94	94.737	Amphiprion_ocellaris
ENSMAMG00000006610	prpf18	100	95.015	ENSAPEG00000004564	prpf18	100	95.015	Amphiprion_percula
ENSMAMG00000006610	prpf18	100	95.601	ENSATEG00000000303	prpf18	100	95.601	Anabas_testudineus
ENSMAMG00000006610	prpf18	99	82.353	ENSAPLG00000003387	-	99	82.353	Anas_platyrhynchos
ENSMAMG00000006610	prpf18	100	83.140	ENSACAG00000000818	-	100	83.140	Anolis_carolinensis
ENSMAMG00000006610	prpf18	100	83.626	ENSANAG00000037445	-	100	83.626	Aotus_nancymaae
ENSMAMG00000006610	prpf18	100	93.548	ENSACLG00000026296	prpf18	100	93.548	Astatotilapia_calliptera
ENSMAMG00000006610	prpf18	100	89.143	ENSAMXG00000012848	prpf18	100	89.143	Astyanax_mexicanus
ENSMAMG00000006610	prpf18	100	83.041	ENSBTAG00000017244	PRPF18	100	83.041	Bos_taurus
ENSMAMG00000006610	prpf18	98	40.230	WBGene00009320	F32B6.3	97	40.230	Caenorhabditis_elegans
ENSMAMG00000006610	prpf18	100	83.626	ENSCJAG00000009432	-	100	83.626	Callithrix_jacchus
ENSMAMG00000006610	prpf18	100	83.041	ENSCAFG00000004735	-	100	83.041	Canis_familiaris
ENSMAMG00000006610	prpf18	100	83.041	ENSCAFG00020007712	-	100	83.041	Canis_lupus_dingo
ENSMAMG00000006610	prpf18	100	83.041	ENSCHIG00000000499	-	100	83.041	Capra_hircus
ENSMAMG00000006610	prpf18	100	83.041	ENSTSYG00000003517	-	100	83.041	Carlito_syrichta
ENSMAMG00000006610	prpf18	100	83.626	ENSCPOG00000021069	-	100	83.626	Cavia_porcellus
ENSMAMG00000006610	prpf18	100	83.626	ENSCCAG00000036822	-	100	83.626	Cebus_capucinus
ENSMAMG00000006610	prpf18	100	72.807	ENSCATG00000016633	-	100	72.807	Cercocebus_atys
ENSMAMG00000006610	prpf18	100	83.041	ENSCLAG00000011770	-	100	83.041	Chinchilla_lanigera
ENSMAMG00000006610	prpf18	100	82.051	ENSCSAG00000013109	-	100	82.051	Chlorocebus_sabaeus
ENSMAMG00000006610	prpf18	100	79.494	ENSCPBG00000003100	-	100	80.337	Chrysemys_picta_bellii
ENSMAMG00000006610	prpf18	99	56.560	ENSCING00000020481	-	97	56.560	Ciona_intestinalis
ENSMAMG00000006610	prpf18	99	55.394	ENSCSAVG00000010546	-	99	55.102	Ciona_savignyi
ENSMAMG00000006610	prpf18	100	83.626	ENSCANG00000034900	-	100	83.626	Colobus_angolensis_palliatus
ENSMAMG00000006610	prpf18	100	83.041	ENSCGRG00001023665	Prpf18	100	83.041	Cricetulus_griseus_chok1gshd
ENSMAMG00000006610	prpf18	100	83.041	ENSCGRG00000014690	Prpf18	100	83.041	Cricetulus_griseus_crigri
ENSMAMG00000006610	prpf18	100	91.496	ENSCSEG00000005536	prpf18	99	91.496	Cynoglossus_semilaevis
ENSMAMG00000006610	prpf18	100	92.669	ENSCVAG00000012401	prpf18	100	92.669	Cyprinodon_variegatus
ENSMAMG00000006610	prpf18	100	90.936	ENSDARG00000058306	prpf18	100	90.936	Danio_rerio
ENSMAMG00000006610	prpf18	100	83.333	ENSDNOG00000035607	-	100	83.333	Dasypus_novemcinctus
ENSMAMG00000006610	prpf18	100	82.749	ENSDORG00000000858	Prpf18	100	82.749	Dipodomys_ordii
ENSMAMG00000006610	prpf18	99	52.367	FBgn0027784	Prp18	98	52.367	Drosophila_melanogaster
ENSMAMG00000006610	prpf18	100	75.439	ENSETEG00000015060	-	100	75.439	Echinops_telfairi
ENSMAMG00000006610	prpf18	100	70.029	ENSEBUG00000016502	prpf18	99	69.164	Eptatretus_burgeri
ENSMAMG00000006610	prpf18	100	83.333	ENSEASG00005019373	-	100	83.333	Equus_asinus_asinus
ENSMAMG00000006610	prpf18	100	83.333	ENSECAG00000006997	PRPF18	100	83.333	Equus_caballus
ENSMAMG00000006610	prpf18	75	100.000	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSMAMG00000006610	prpf18	100	88.921	ENSELUG00000022190	prpf18	100	88.921	Esox_lucius
ENSMAMG00000006610	prpf18	100	83.333	ENSFCAG00000004436	-	100	83.333	Felis_catus
ENSMAMG00000006610	prpf18	93	80.000	ENSFALG00000001912	-	97	80.308	Ficedula_albicollis
ENSMAMG00000006610	prpf18	94	85.625	ENSFDAG00000014026	-	100	85.625	Fukomys_damarensis
ENSMAMG00000006610	prpf18	99	57.391	ENSFDAG00000010713	-	97	57.391	Fukomys_damarensis
ENSMAMG00000006610	prpf18	80	94.139	ENSFHEG00000020125	prpf18	98	94.007	Fundulus_heteroclitus
ENSMAMG00000006610	prpf18	99	87.059	ENSGMOG00000012210	prpf18	99	87.059	Gadus_morhua
ENSMAMG00000006610	prpf18	100	83.333	ENSGALG00000043593	-	100	83.333	Gallus_gallus
ENSMAMG00000006610	prpf18	100	91.789	ENSGAFG00000006034	prpf18	100	91.789	Gambusia_affinis
ENSMAMG00000006610	prpf18	100	91.202	ENSGACG00000012232	prpf18	100	91.202	Gasterosteus_aculeatus
ENSMAMG00000006610	prpf18	100	83.041	ENSGAGG00000016878	-	100	83.041	Gopherus_agassizii
ENSMAMG00000006610	prpf18	92	82.595	ENSGGOG00000025188	-	96	82.595	Gorilla_gorilla
ENSMAMG00000006610	prpf18	100	93.714	ENSHBUG00000010264	prpf18	100	93.714	Haplochromis_burtoni
ENSMAMG00000006610	prpf18	100	83.041	ENSHGLG00000018534	PRPF18	100	83.041	Heterocephalus_glaber_female
ENSMAMG00000006610	prpf18	94	85.312	ENSHGLG00100012161	-	98	85.312	Heterocephalus_glaber_male
ENSMAMG00000006610	prpf18	100	95.015	ENSHCOG00000015987	prpf18	100	95.015	Hippocampus_comes
ENSMAMG00000006610	prpf18	100	83.003	ENSIPUG00000007432	prpf18	100	83.569	Ictalurus_punctatus
ENSMAMG00000006610	prpf18	100	83.041	ENSSTOG00000008735	-	100	83.041	Ictidomys_tridecemlineatus
ENSMAMG00000006610	prpf18	100	62.099	ENSJJAG00000015191	-	100	62.099	Jaculus_jaculus
ENSMAMG00000006610	prpf18	100	83.626	ENSJJAG00000024041	-	100	83.626	Jaculus_jaculus
ENSMAMG00000006610	prpf18	100	92.082	ENSKMAG00000012124	prpf18	100	92.082	Kryptolebias_marmoratus
ENSMAMG00000006610	prpf18	97	90.361	ENSLBEG00000028466	prpf18	98	90.361	Labrus_bergylta
ENSMAMG00000006610	prpf18	100	83.918	ENSLACG00000009885	prpf18	100	84.795	Latimeria_chalumnae
ENSMAMG00000006610	prpf18	100	88.304	ENSLOCG00000016736	prpf18	100	88.304	Lepisosteus_oculatus
ENSMAMG00000006610	prpf18	100	83.626	ENSLAFG00000007753	-	100	83.626	Loxodonta_africana
ENSMAMG00000006610	prpf18	100	83.626	ENSMFAG00000000540	-	100	83.626	Macaca_fascicularis
ENSMAMG00000006610	prpf18	100	83.626	ENSMMUG00000015071	PRPF18	93	92.053	Macaca_mulatta
ENSMAMG00000006610	prpf18	100	83.626	ENSMNEG00000024679	-	100	83.626	Macaca_nemestrina
ENSMAMG00000006610	prpf18	100	68.421	ENSMLEG00000031715	-	100	68.421	Mandrillus_leucophaeus
ENSMAMG00000006610	prpf18	100	93.714	ENSMZEG00005019392	prpf18	100	93.714	Maylandia_zebra
ENSMAMG00000006610	prpf18	100	83.333	ENSMGAG00000005023	-	100	83.333	Meleagris_gallopavo
ENSMAMG00000006610	prpf18	100	83.918	ENSMICG00000006572	-	100	83.918	Microcebus_murinus
ENSMAMG00000006610	prpf18	100	83.626	ENSMOCG00000021468	Prpf18	100	83.626	Microtus_ochrogaster
ENSMAMG00000006610	prpf18	100	94.135	ENSMMOG00000013012	prpf18	100	94.135	Mola_mola
ENSMAMG00000006610	prpf18	100	76.023	ENSMODG00000024043	-	100	76.023	Monodelphis_domestica
ENSMAMG00000006610	prpf18	99	77.011	ENSMODG00000016902	-	95	77.011	Monodelphis_domestica
ENSMAMG00000006610	prpf18	100	85.465	ENSMALG00000005486	prpf18	100	85.756	Monopterus_albus
ENSMAMG00000006610	prpf18	100	83.333	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSMAMG00000006610	prpf18	100	83.626	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSMAMG00000006610	prpf18	100	83.626	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSMAMG00000006610	prpf18	100	83.333	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSMAMG00000006610	prpf18	100	82.749	ENSMPUG00000000938	-	100	82.749	Mustela_putorius_furo
ENSMAMG00000006610	prpf18	100	83.041	ENSMLUG00000009200	-	100	83.041	Myotis_lucifugus
ENSMAMG00000006610	prpf18	68	81.466	ENSNGAG00000023550	-	82	82.174	Nannospalax_galili
ENSMAMG00000006610	prpf18	100	83.626	ENSNGAG00000012500	-	100	83.626	Nannospalax_galili
ENSMAMG00000006610	prpf18	100	93.842	ENSNBRG00000001778	prpf18	100	93.842	Neolamprologus_brichardi
ENSMAMG00000006610	prpf18	100	83.626	ENSNLEG00000012186	-	100	83.626	Nomascus_leucogenys
ENSMAMG00000006610	prpf18	76	72.973	ENSMEUG00000005032	-	75	72.973	Notamacropus_eugenii
ENSMAMG00000006610	prpf18	77	63.774	ENSOPRG00000002153	-	100	63.774	Ochotona_princeps
ENSMAMG00000006610	prpf18	100	82.749	ENSODEG00000003770	-	100	82.749	Octodon_degus
ENSMAMG00000006610	prpf18	98	93.114	ENSONIG00000014854	prpf18	96	93.114	Oreochromis_niloticus
ENSMAMG00000006610	prpf18	100	83.626	ENSOANG00000015404	-	100	83.626	Ornithorhynchus_anatinus
ENSMAMG00000006610	prpf18	100	83.333	ENSOCUG00000027756	-	96	84.404	Oryctolagus_cuniculus
ENSMAMG00000006610	prpf18	100	92.857	ENSORLG00000010293	prpf18	100	92.857	Oryzias_latipes
ENSMAMG00000006610	prpf18	100	92.962	ENSORLG00020001530	prpf18	100	92.962	Oryzias_latipes_hni
ENSMAMG00000006610	prpf18	100	92.669	ENSORLG00015013705	prpf18	100	92.669	Oryzias_latipes_hsok
ENSMAMG00000006610	prpf18	100	93.842	ENSOMEG00000009167	prpf18	100	93.842	Oryzias_melastigma
ENSMAMG00000006610	prpf18	100	82.749	ENSOGAG00000007294	-	100	82.749	Otolemur_garnettii
ENSMAMG00000006610	prpf18	100	81.481	ENSOARG00000006243	-	100	81.481	Ovis_aries
ENSMAMG00000006610	prpf18	100	83.626	ENSPPAG00000041959	-	100	83.626	Pan_paniscus
ENSMAMG00000006610	prpf18	100	83.333	ENSPPRG00000000107	-	100	83.333	Panthera_pardus
ENSMAMG00000006610	prpf18	100	83.333	ENSPTIG00000021094	-	100	83.333	Panthera_tigris_altaica
ENSMAMG00000006610	prpf18	100	83.626	ENSPTRG00000002306	PRPF18	100	83.626	Pan_troglodytes
ENSMAMG00000006610	prpf18	100	83.333	ENSPANG00000023346	-	100	83.333	Papio_anubis
ENSMAMG00000006610	prpf18	91	100.000	ENSPKIG00000014128	prpf18	96	88.034	Paramormyrops_kingsleyae
ENSMAMG00000006610	prpf18	100	83.626	ENSPSIG00000016064	-	100	83.626	Pelodiscus_sinensis
ENSMAMG00000006610	prpf18	100	85.673	ENSPMGG00000016486	prpf18	100	85.673	Periophthalmus_magnuspinnatus
ENSMAMG00000006610	prpf18	100	83.333	ENSPEMG00000013704	Prpf18	100	83.333	Peromyscus_maniculatus_bairdii
ENSMAMG00000006610	prpf18	100	74.063	ENSPMAG00000000204	prpf18	100	74.063	Petromyzon_marinus
ENSMAMG00000006610	prpf18	92	82.595	ENSPCIG00000012963	-	99	82.595	Phascolarctos_cinereus
ENSMAMG00000006610	prpf18	100	90.571	ENSPFOG00000017611	prpf18	100	90.571	Poecilia_formosa
ENSMAMG00000006610	prpf18	100	90.909	ENSPLAG00000000369	prpf18	100	90.909	Poecilia_latipinna
ENSMAMG00000006610	prpf18	100	91.202	ENSPMEG00000005183	prpf18	100	91.202	Poecilia_mexicana
ENSMAMG00000006610	prpf18	100	91.789	ENSPREG00000015232	prpf18	100	91.789	Poecilia_reticulata
ENSMAMG00000006610	prpf18	100	83.333	ENSPPYG00000002101	PRPF18	100	83.333	Pongo_abelii
ENSMAMG00000006610	prpf18	84	90.244	ENSPCAG00000010833	-	82	90.244	Procavia_capensis
ENSMAMG00000006610	prpf18	100	78.886	ENSPCOG00000013057	-	100	78.886	Propithecus_coquereli
ENSMAMG00000006610	prpf18	100	51.170	ENSPVAG00000002947	-	100	51.170	Pteropus_vampyrus
ENSMAMG00000006610	prpf18	100	94.000	ENSPNYG00000003554	prpf18	100	94.000	Pundamilia_nyererei
ENSMAMG00000006610	prpf18	100	89.174	ENSPNAG00000023151	prpf18	100	89.174	Pygocentrus_nattereri
ENSMAMG00000006610	prpf18	100	83.041	ENSRNOG00000018396	Prpf18	100	83.041	Rattus_norvegicus
ENSMAMG00000006610	prpf18	100	83.918	ENSRBIG00000028028	-	100	83.918	Rhinopithecus_bieti
ENSMAMG00000006610	prpf18	100	83.626	ENSRROG00000040695	-	100	83.626	Rhinopithecus_roxellana
ENSMAMG00000006610	prpf18	100	83.626	ENSSBOG00000034482	-	100	83.626	Saimiri_boliviensis_boliviensis
ENSMAMG00000006610	prpf18	100	83.626	ENSSHAG00000016463	-	100	83.626	Sarcophilus_harrisii
ENSMAMG00000006610	prpf18	100	70.468	ENSSHAG00000009669	-	100	70.468	Sarcophilus_harrisii
ENSMAMG00000006610	prpf18	98	86.377	ENSSFOG00015022118	prpf18	100	80.692	Scleropages_formosus
ENSMAMG00000006610	prpf18	68	51.073	ENSSFOG00015021154	-	89	51.073	Scleropages_formosus
ENSMAMG00000006610	prpf18	100	92.286	ENSSMAG00000005308	prpf18	100	92.286	Scophthalmus_maximus
ENSMAMG00000006610	prpf18	100	96.857	ENSSDUG00000015428	prpf18	100	96.857	Seriola_dumerili
ENSMAMG00000006610	prpf18	100	96.857	ENSSLDG00000023989	prpf18	100	96.857	Seriola_lalandi_dorsalis
ENSMAMG00000006610	prpf18	80	96.154	ENSSARG00000005307	-	78	96.154	Sorex_araneus
ENSMAMG00000006610	prpf18	100	82.749	ENSSPUG00000002619	-	100	82.749	Sphenodon_punctatus
ENSMAMG00000006610	prpf18	100	95.714	ENSSPAG00000019502	prpf18	100	95.714	Stegastes_partitus
ENSMAMG00000006610	prpf18	100	83.041	ENSSSCG00000026354	-	100	83.041	Sus_scrofa
ENSMAMG00000006610	prpf18	100	83.041	ENSTGUG00000002286	-	100	83.041	Taeniopygia_guttata
ENSMAMG00000006610	prpf18	100	90.029	ENSTRUG00000011278	prpf18	100	90.029	Takifugu_rubripes
ENSMAMG00000006610	prpf18	100	91.496	ENSTNIG00000000911	prpf18	100	91.496	Tetraodon_nigroviridis
ENSMAMG00000006610	prpf18	81	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSMAMG00000006610	prpf18	100	83.918	ENSTTRG00000011117	PRPF18	100	83.918	Tursiops_truncatus
ENSMAMG00000006610	prpf18	91	86.174	ENSUAMG00000001815	-	93	86.174	Ursus_americanus
ENSMAMG00000006610	prpf18	100	79.042	ENSUMAG00000012329	-	100	79.042	Ursus_maritimus
ENSMAMG00000006610	prpf18	100	77.485	ENSVPAG00000011486	-	100	77.485	Vicugna_pacos
ENSMAMG00000006610	prpf18	100	83.041	ENSVVUG00000005453	-	100	83.041	Vulpes_vulpes
ENSMAMG00000006610	prpf18	100	75.942	ENSXETG00000024057	prpf18	100	75.652	Xenopus_tropicalis
ENSMAMG00000006610	prpf18	100	91.254	ENSXCOG00000020414	prpf18	100	91.254	Xiphophorus_couchianus
ENSMAMG00000006610	prpf18	100	91.789	ENSXMAG00000004713	prpf18	91	91.789	Xiphophorus_maculatus