EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000006862 (Gene tree)
Gene ID: 113134268
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6207 bases
Position: chrOOHQ01000035.1:19554091-19560297
Accession: 113134268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000010201	MMR_HSR1	PF01926.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000010461	-	729	-	ENSMAMP00000010201	242 (aa)	XP_026169331	UPI000E45D86B

Gene Model

Click here to download ENSMAMG00000006862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000006862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000006862	rab12	84	38.028	ENSMAMG00000017327	rab11a	76	41.212
ENSMAMG00000006862	rab12	77	38.421	ENSMAMG00000023962	RAB7A	80	38.323
ENSMAMG00000006862	rab12	67	35.928	ENSMAMG00000013538	rab9a	82	35.928
ENSMAMG00000006862	rab12	55	32.090	ENSMAMG00000013700	si:ch73-116o1.2	80	30.357
ENSMAMG00000006862	rab12	81	37.056	ENSMAMG00000018450	-	78	40.828
ENSMAMG00000006862	rab12	65	36.646	ENSMAMG00000010136	rab36	59	36.420
ENSMAMG00000006862	rab12	74	36.313	ENSMAMG00000012573	rab5aa	81	36.313
ENSMAMG00000006862	rab12	69	31.138	ENSMAMG00000006281	rheb	89	31.138
ENSMAMG00000006862	rab12	77	44.385	ENSMAMG00000011973	rab30	90	44.385
ENSMAMG00000006862	rab12	69	35.632	ENSMAMG00000000238	rab32b	80	35.429
ENSMAMG00000006862	rab12	65	35.625	ENSMAMG00000020214	rab34b	63	35.625
ENSMAMG00000006862	rab12	83	35.149	ENSMAMG00000012488	rab6a	76	40.000
ENSMAMG00000006862	rab12	78	35.638	ENSMAMG00000022322	rab5c	83	35.638
ENSMAMG00000006862	rab12	83	33.654	ENSMAMG00000009927	rab9b	82	35.503
ENSMAMG00000006862	rab12	84	38.835	ENSMAMG00000010297	rab25b	93	37.438
ENSMAMG00000006862	rab12	71	35.751	ENSMAMG00000021095	si:dkey-13a21.4	94	35.751
ENSMAMG00000006862	rab12	80	36.364	ENSMAMG00000000565	rab33a	69	40.491
ENSMAMG00000006862	rab12	79	37.173	ENSMAMG00000012233	rab6bb	75	40.385
ENSMAMG00000006862	rab12	67	49.390	ENSMAMG00000018445	rab18b	79	49.390
ENSMAMG00000006862	rab12	79	45.263	ENSMAMG00000018306	-	83	49.112
ENSMAMG00000006862	rab12	66	35.849	ENSMAMG00000006024	rab22a	81	35.849
ENSMAMG00000006862	rab12	77	38.421	ENSMAMG00000020246	-	80	38.323
ENSMAMG00000006862	rab12	78	36.126	ENSMAMG00000020859	rab41	85	36.066
ENSMAMG00000006862	rab12	74	41.341	ENSMAMG00000006886	RAB15	84	41.341
ENSMAMG00000006862	rab12	65	30.818	ENSMAMG00000001748	rhebl1	85	30.818
ENSMAMG00000006862	rab12	66	39.623	ENSMAMG00000009672	rab6ba	75	40.385
ENSMAMG00000006862	rab12	61	37.908	ENSMAMG00000006640	-	63	37.908
ENSMAMG00000006862	rab12	71	41.279	ENSMAMG00000019230	si:dkey-16l2.16	81	41.279
ENSMAMG00000006862	rab12	69	36.612	ENSMAMG00000001098	rab33ba	78	37.696
ENSMAMG00000006862	rab12	69	42.857	ENSMAMG00000011131	-	78	42.857
ENSMAMG00000006862	rab12	80	36.788	ENSMAMG00000016207	-	76	36.628
ENSMAMG00000006862	rab12	68	42.515	ENSMAMG00000021329	RAB39B	78	42.515
ENSMAMG00000006862	rab12	64	36.250	ENSMAMG00000015456	rab23	84	32.948
ENSMAMG00000006862	rab12	76	39.130	ENSMAMG00000012471	rab25a	84	39.130
ENSMAMG00000006862	rab12	84	37.264	ENSMAMG00000018533	-	75	41.818
ENSMAMG00000006862	rab12	70	41.860	ENSMAMG00000002296	rab42a	78	41.860
ENSMAMG00000006862	rab12	82	32.673	ENSMAMG00000018672	rab34a	62	35.366
ENSMAMG00000006862	rab12	74	48.128	ENSMAMG00000014602	rab13	86	50.581
ENSMAMG00000006862	rab12	84	37.500	ENSMAMG00000006378	rab11bb	75	42.424
ENSMAMG00000006862	rab12	70	44.706	ENSMAMG00000002795	rab15	79	44.706
ENSMAMG00000006862	rab12	79	34.694	ENSMAMG00000006963	RAB29	83	36.628
ENSMAMG00000006862	rab12	71	41.899	ENSMAMG00000020286	-	86	41.899
ENSMAMG00000006862	rab12	84	37.500	ENSMAMG00000018556	rab11ba	78	41.818
ENSMAMG00000006862	rab12	66	34.161	ENSMAMG00000004106	rras	87	33.908
ENSMAMG00000006862	rab12	86	35.849	ENSMAMG00000012750	rab14	78	40.828
ENSMAMG00000006862	rab12	79	40.625	ENSMAMG00000011549	rab2a	92	40.816
ENSMAMG00000006862	rab12	67	48.171	ENSMAMG00000014320	rab18a	79	48.171
ENSMAMG00000006862	rab12	71	46.512	ENSMAMG00000020135	zgc:171927	80	46.512
ENSMAMG00000006862	rab12	62	31.788	ENSMAMG00000005606	kras	85	32.099
ENSMAMG00000006862	rab12	84	37.619	ENSMAMG00000010278	rab11al	76	41.818
ENSMAMG00000006862	rab12	67	31.902	ENSMAMG00000008168	rabl2	71	31.902
ENSMAMG00000006862	rab12	88	35.455	ENSMAMG00000017431	zgc:101559	77	37.363
ENSMAMG00000006862	rab12	70	47.929	ENSMAMG00000001408	rab1ba	85	47.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000006862	rab12	93	84.000	ENSG00000206418	RAB12	100	83.607	Homo_sapiens
ENSMAMG00000006862	rab12	90	77.626	ENSAMEG00000007452	RAB12	94	81.279	Ailuropoda_melanoleuca
ENSMAMG00000006862	rab12	100	97.541	ENSACIG00000020616	rab12	100	97.541	Amphilophus_citrinellus
ENSMAMG00000006862	rab12	100	97.119	ENSAOCG00000002130	rab12	100	97.119	Amphiprion_ocellaris
ENSMAMG00000006862	rab12	100	97.119	ENSAPEG00000013255	rab12	100	97.119	Amphiprion_percula
ENSMAMG00000006862	rab12	100	98.347	ENSATEG00000019683	rab12	100	98.347	Anabas_testudineus
ENSMAMG00000006862	rab12	83	89.500	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSMAMG00000006862	rab12	100	97.942	ENSACLG00000007696	rab12	100	97.942	Astatotilapia_calliptera
ENSMAMG00000006862	rab12	100	88.618	ENSAMXG00000004882	rab12	100	89.431	Astyanax_mexicanus
ENSMAMG00000006862	rab12	93	84.444	ENSBTAG00000010356	RAB12	100	84.016	Bos_taurus
ENSMAMG00000006862	rab12	93	84.956	ENSCJAG00000015468	RAB12	72	84.490	Callithrix_jacchus
ENSMAMG00000006862	rab12	93	84.000	ENSCAFG00020023721	RAB12	84	83.607	Canis_lupus_dingo
ENSMAMG00000006862	rab12	93	84.444	ENSCHIG00000016103	RAB12	100	84.016	Capra_hircus
ENSMAMG00000006862	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSMAMG00000006862	rab12	93	84.956	ENSCCAG00000022862	RAB12	100	84.490	Cebus_capucinus
ENSMAMG00000006862	rab12	91	83.929	ENSCATG00000037784	RAB12	93	87.444	Cercocebus_atys
ENSMAMG00000006862	rab12	84	88.293	ENSCSAG00000017569	RAB12	72	83.065	Chlorocebus_sabaeus
ENSMAMG00000006862	rab12	93	82.743	ENSCPBG00000028375	RAB12	100	82.449	Chrysemys_picta_bellii
ENSMAMG00000006862	rab12	90	84.018	ENSCANG00000031453	RAB12	99	87.671	Colobus_angolensis_palliatus
ENSMAMG00000006862	rab12	93	84.513	ENSCGRG00001006958	Rab12	83	83.673	Cricetulus_griseus_chok1gshd
ENSMAMG00000006862	rab12	100	97.942	ENSCSEG00000016933	rab12	100	97.942	Cynoglossus_semilaevis
ENSMAMG00000006862	rab12	100	95.528	ENSCVAG00000003539	rab12	100	95.528	Cyprinodon_variegatus
ENSMAMG00000006862	rab12	100	87.603	ENSDARG00000089428	rab12	94	93.182	Danio_rerio
ENSMAMG00000006862	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSMAMG00000006862	rab12	93	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSMAMG00000006862	rab12	78	65.079	ENSEBUG00000006581	rab12	89	66.484	Eptatretus_burgeri
ENSMAMG00000006862	rab12	93	84.071	ENSEASG00005002926	RAB12	83	83.673	Equus_asinus_asinus
ENSMAMG00000006862	rab12	93	84.071	ENSECAG00000007384	RAB12	71	83.673	Equus_caballus
ENSMAMG00000006862	rab12	100	92.149	ENSELUG00000007123	rab12	100	90.496	Esox_lucius
ENSMAMG00000006862	rab12	93	84.000	ENSFCAG00000027710	RAB12	72	83.607	Felis_catus
ENSMAMG00000006862	rab12	100	96.327	ENSFHEG00000004319	rab12	100	96.327	Fundulus_heteroclitus
ENSMAMG00000006862	rab12	86	91.346	ENSGMOG00000012335	rab12	87	89.423	Gadus_morhua
ENSMAMG00000006862	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSMAMG00000006862	rab12	90	92.627	ENSGACG00000016639	rab12	100	92.627	Gasterosteus_aculeatus
ENSMAMG00000006862	rab12	93	82.301	ENSGAGG00000007278	RAB12	100	82.041	Gopherus_agassizii
ENSMAMG00000006862	rab12	100	97.942	ENSHBUG00000008497	rab12	100	97.942	Haplochromis_burtoni
ENSMAMG00000006862	rab12	95	81.034	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSMAMG00000006862	rab12	100	92.593	ENSHCOG00000012376	rab12	100	92.181	Hippocampus_comes
ENSMAMG00000006862	rab12	91	92.308	ENSIPUG00000017401	rab12	90	92.273	Ictalurus_punctatus
ENSMAMG00000006862	rab12	93	82.301	ENSSTOG00000025122	RAB12	96	88.128	Ictidomys_tridecemlineatus
ENSMAMG00000006862	rab12	91	83.929	ENSJJAG00000019064	Rab12	98	87.444	Jaculus_jaculus
ENSMAMG00000006862	rab12	100	92.562	ENSKMAG00000020056	rab12	100	91.322	Kryptolebias_marmoratus
ENSMAMG00000006862	rab12	100	97.934	ENSLBEG00000013756	rab12	100	97.934	Labrus_bergylta
ENSMAMG00000006862	rab12	91	86.547	ENSLACG00000010461	RAB12	90	86.547	Latimeria_chalumnae
ENSMAMG00000006862	rab12	100	83.871	ENSLOCG00000002680	rab12	100	86.694	Lepisosteus_oculatus
ENSMAMG00000006862	rab12	93	84.141	ENSMFAG00000043551	RAB12	100	83.740	Macaca_fascicularis
ENSMAMG00000006862	rab12	84	88.293	ENSMNEG00000040853	RAB12	88	87.444	Macaca_nemestrina
ENSMAMG00000006862	rab12	100	97.942	ENSMZEG00005024316	rab12	100	97.942	Maylandia_zebra
ENSMAMG00000006862	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSMAMG00000006862	rab12	93	84.513	ENSMAUG00000008371	Rab12	83	83.673	Mesocricetus_auratus
ENSMAMG00000006862	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSMAMG00000006862	rab12	90	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSMAMG00000006862	rab12	86	88.038	ENSMODG00000021452	RAB12	66	87.892	Monodelphis_domestica
ENSMAMG00000006862	rab12	100	97.107	ENSMALG00000015762	rab12	100	97.107	Monopterus_albus
ENSMAMG00000006862	rab12	93	84.956	MGP_CAROLIEiJ_G0021839	Rab12	84	84.082	Mus_caroli
ENSMAMG00000006862	rab12	93	84.956	ENSMUSG00000023460	Rab12	100	84.082	Mus_musculus
ENSMAMG00000006862	rab12	93	84.956	MGP_PahariEiJ_G0020826	Rab12	100	84.082	Mus_pahari
ENSMAMG00000006862	rab12	93	84.956	MGP_SPRETEiJ_G0022750	Rab12	83	84.082	Mus_spretus
ENSMAMG00000006862	rab12	100	80.408	ENSMLUG00000002883	RAB12	100	83.673	Myotis_lucifugus
ENSMAMG00000006862	rab12	95	81.116	ENSNGAG00000024103	-	95	86.996	Nannospalax_galili
ENSMAMG00000006862	rab12	91	76.786	ENSNGAG00000019722	-	91	76.682	Nannospalax_galili
ENSMAMG00000006862	rab12	100	97.942	ENSNBRG00000014428	rab12	100	97.942	Neolamprologus_brichardi
ENSMAMG00000006862	rab12	93	83.556	ENSNLEG00000006939	RAB12	100	83.197	Nomascus_leucogenys
ENSMAMG00000006862	rab12	100	80.488	ENSMEUG00000000493	RAB12	91	87.892	Notamacropus_eugenii
ENSMAMG00000006862	rab12	90	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSMAMG00000006862	rab12	100	97.531	ENSONIG00000018469	rab12	100	97.531	Oreochromis_niloticus
ENSMAMG00000006862	rab12	100	96.694	ENSORLG00000003902	rab12	100	96.694	Oryzias_latipes
ENSMAMG00000006862	rab12	100	96.281	ENSORLG00020005131	rab12	100	96.281	Oryzias_latipes_hni
ENSMAMG00000006862	rab12	100	96.281	ENSORLG00015007869	rab12	100	96.281	Oryzias_latipes_hsok
ENSMAMG00000006862	rab12	100	97.521	ENSOMEG00000008191	rab12	100	97.521	Oryzias_melastigma
ENSMAMG00000006862	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSMAMG00000006862	rab12	79	89.005	ENSOARG00000000728	RAB12	88	86.977	Ovis_aries
ENSMAMG00000006862	rab12	85	84.058	ENSPPAG00000009152	RAB12	97	88.350	Pan_paniscus
ENSMAMG00000006862	rab12	93	84.000	ENSPPRG00000024521	RAB12	100	83.607	Panthera_pardus
ENSMAMG00000006862	rab12	93	84.000	ENSPTRG00000009853	RAB12	100	83.607	Pan_troglodytes
ENSMAMG00000006862	rab12	93	84.211	ENSPANG00000009320	RAB12	90	87.892	Papio_anubis
ENSMAMG00000006862	rab12	100	89.300	ENSPKIG00000008579	rab12	100	88.889	Paramormyrops_kingsleyae
ENSMAMG00000006862	rab12	100	92.562	ENSPMGG00000001890	rab12	100	92.562	Periophthalmus_magnuspinnatus
ENSMAMG00000006862	rab12	93	84.956	ENSPEMG00000021032	Rab12	84	84.082	Peromyscus_maniculatus_bairdii
ENSMAMG00000006862	rab12	93	84.141	ENSPCIG00000010453	RAB12	56	87.892	Phascolarctos_cinereus
ENSMAMG00000006862	rab12	100	93.852	ENSPFOG00000001579	rab12	100	93.852	Poecilia_formosa
ENSMAMG00000006862	rab12	100	93.852	ENSPLAG00000013594	rab12	100	93.852	Poecilia_latipinna
ENSMAMG00000006862	rab12	100	93.852	ENSPMEG00000010417	rab12	100	93.852	Poecilia_mexicana
ENSMAMG00000006862	rab12	100	93.852	ENSPREG00000017487	rab12	100	94.262	Poecilia_reticulata
ENSMAMG00000006862	rab12	93	84.000	ENSPPYG00000009015	-	72	83.607	Pongo_abelii
ENSMAMG00000006862	rab12	93	83.556	ENSPCAG00000015007	RAB12	100	83.197	Procavia_capensis
ENSMAMG00000006862	rab12	93	84.000	ENSPCOG00000019816	RAB12	100	83.607	Propithecus_coquereli
ENSMAMG00000006862	rab12	93	83.556	ENSPVAG00000002757	RAB12	100	83.197	Pteropus_vampyrus
ENSMAMG00000006862	rab12	100	97.942	ENSPNYG00000005654	rab12	100	97.942	Pundamilia_nyererei
ENSMAMG00000006862	rab12	100	97.942	ENSPNYG00000023905	rab12	100	97.942	Pundamilia_nyererei
ENSMAMG00000006862	rab12	100	88.211	ENSPNAG00000015031	rab12	100	89.024	Pygocentrus_nattereri
ENSMAMG00000006862	rab12	93	82.819	ENSRNOG00000019295	Rab12	91	82.379	Rattus_norvegicus
ENSMAMG00000006862	rab12	91	83.929	ENSRBIG00000028760	RAB12	96	87.444	Rhinopithecus_bieti
ENSMAMG00000006862	rab12	91	83.929	ENSRROG00000019249	RAB12	93	87.444	Rhinopithecus_roxellana
ENSMAMG00000006862	rab12	95	79.221	ENSSBOG00000021125	RAB12	80	88.038	Saimiri_boliviensis_boliviensis
ENSMAMG00000006862	rab12	93	83.628	ENSSHAG00000001489	RAB12	90	88.177	Sarcophilus_harrisii
ENSMAMG00000006862	rab12	100	98.347	ENSSMAG00000012678	rab12	100	98.347	Scophthalmus_maximus
ENSMAMG00000006862	rab12	100	99.174	ENSSDUG00000008505	rab12	100	99.174	Seriola_dumerili
ENSMAMG00000006862	rab12	100	99.174	ENSSLDG00000022239	rab12	100	99.174	Seriola_lalandi_dorsalis
ENSMAMG00000006862	rab12	84	89.706	ENSSPUG00000003222	RAB12	91	88.789	Sphenodon_punctatus
ENSMAMG00000006862	rab12	100	97.531	ENSSPAG00000010822	rab12	100	97.531	Stegastes_partitus
ENSMAMG00000006862	rab12	93	84.000	ENSSSCG00000038026	RAB12	100	84.016	Sus_scrofa
ENSMAMG00000006862	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSMAMG00000006862	rab12	100	94.215	ENSTRUG00000024455	rab12	100	94.215	Takifugu_rubripes
ENSMAMG00000006862	rab12	100	94.628	ENSTNIG00000014859	rab12	100	94.628	Tetraodon_nigroviridis
ENSMAMG00000006862	rab12	90	84.018	ENSTTRG00000008711	RAB12	99	87.671	Tursiops_truncatus
ENSMAMG00000006862	rab12	93	84.000	ENSUAMG00000018092	RAB12	100	83.607	Ursus_americanus
ENSMAMG00000006862	rab12	90	83.258	ENSVVUG00000011748	RAB12	99	86.878	Vulpes_vulpes
ENSMAMG00000006862	rab12	89	88.073	ENSXETG00000004289	rab12	72	87.946	Xenopus_tropicalis
ENSMAMG00000006862	rab12	100	93.443	ENSXCOG00000019310	rab12	100	93.852	Xiphophorus_couchianus
ENSMAMG00000006862	rab12	100	93.852	ENSXMAG00000023617	rab12	100	94.262	Xiphophorus_maculatus