EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000006939 (Gene tree)
Gene ID: 113127845
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 9256 bases
Position: chrOOHQ01000044.1:3530865-3540120
Accession: 113127845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000010291	RNA_bind	PF08675.11	1.9e-33	1	1
ENSMAMP00000010291	CAF1	PF04857.20	2.1e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000010553	-	2819	-	ENSMAMP00000010291	687 (aa)	XP_026158486	UPI000E454AD6

Gene Model

Click here to download ENSMAMG00000006939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000006939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000006939	parn	84	72.987	ENSG00000140694	PARN	99	70.035	Homo_sapiens
ENSMAMG00000006939	parn	78	77.467	ENSAMEG00000011208	PARN	83	77.467	Ailuropoda_melanoleuca
ENSMAMG00000006939	parn	87	83.750	ENSACIG00000000619	parn	99	83.750	Amphilophus_citrinellus
ENSMAMG00000006939	parn	100	88.567	ENSAOCG00000003465	parn	100	88.567	Amphiprion_ocellaris
ENSMAMG00000006939	parn	72	93.902	ENSAPEG00000010661	parn	94	93.902	Amphiprion_percula
ENSMAMG00000006939	parn	100	91.557	ENSATEG00000004661	parn	100	91.703	Anabas_testudineus
ENSMAMG00000006939	parn	83	72.461	ENSAPLG00000013914	PARN	92	71.765	Anas_platyrhynchos
ENSMAMG00000006939	parn	83	73.684	ENSACAG00000004973	PARN	90	73.684	Anolis_carolinensis
ENSMAMG00000006939	parn	84	72.529	ENSANAG00000031516	PARN	91	77.966	Aotus_nancymaae
ENSMAMG00000006939	parn	100	89.229	ENSACLG00000004742	parn	100	89.229	Astatotilapia_calliptera
ENSMAMG00000006939	parn	100	72.504	ENSAMXG00000012390	parn	96	76.461	Astyanax_mexicanus
ENSMAMG00000006939	parn	78	74.440	ENSBTAG00000018097	PARN	81	77.684	Bos_taurus
ENSMAMG00000006939	parn	84	72.697	ENSCJAG00000015866	PARN	91	77.966	Callithrix_jacchus
ENSMAMG00000006939	parn	84	71.644	ENSCAFG00000018795	PARN	92	71.644	Canis_familiaris
ENSMAMG00000006939	parn	84	71.980	ENSCAFG00020024126	PARN	92	71.980	Canis_lupus_dingo
ENSMAMG00000006939	parn	78	77.612	ENSCHIG00000018143	PARN	83	77.612	Capra_hircus
ENSMAMG00000006939	parn	68	50.728	ENSCAPG00000007984	PARN	78	50.728	Cavia_aperea
ENSMAMG00000006939	parn	82	72.712	ENSCPOG00000002263	PARN	90	72.712	Cavia_porcellus
ENSMAMG00000006939	parn	84	72.697	ENSCCAG00000030367	PARN	91	77.966	Cebus_capucinus
ENSMAMG00000006939	parn	50	33.103	ENSCATG00000033196	PNLDC1	72	33.103	Cercocebus_atys
ENSMAMG00000006939	parn	78	77.985	ENSCATG00000041368	PARN	95	77.985	Cercocebus_atys
ENSMAMG00000006939	parn	82	74.306	ENSCLAG00000015406	PARN	99	67.945	Chinchilla_lanigera
ENSMAMG00000006939	parn	84	72.697	ENSCSAG00000008142	PARN	92	72.697	Chlorocebus_sabaeus
ENSMAMG00000006939	parn	81	57.143	ENSCHOG00000007014	PARN	90	57.143	Choloepus_hoffmanni
ENSMAMG00000006939	parn	75	73.814	ENSCPBG00000006609	PARN	90	73.814	Chrysemys_picta_bellii
ENSMAMG00000006939	parn	75	42.322	ENSCING00000010142	-	99	42.322	Ciona_intestinalis
ENSMAMG00000006939	parn	84	62.131	ENSCANG00000028849	-	89	77.966	Colobus_angolensis_palliatus
ENSMAMG00000006939	parn	83	72.913	ENSCGRG00001012096	Parn	91	72.913	Cricetulus_griseus_chok1gshd
ENSMAMG00000006939	parn	83	72.913	ENSCGRG00000004939	Parn	91	72.913	Cricetulus_griseus_crigri
ENSMAMG00000006939	parn	100	85.072	ENSCSEG00000002064	parn	100	85.072	Cynoglossus_semilaevis
ENSMAMG00000006939	parn	100	84.571	ENSCVAG00000014848	parn	100	84.571	Cyprinodon_variegatus
ENSMAMG00000006939	parn	100	67.677	ENSDARG00000102634	parn	100	67.677	Danio_rerio
ENSMAMG00000006939	parn	78	77.612	ENSDNOG00000000833	PARN	94	77.612	Dasypus_novemcinctus
ENSMAMG00000006939	parn	61	75.758	ENSETEG00000014828	-	69	75.758	Echinops_telfairi
ENSMAMG00000006939	parn	84	71.262	ENSEASG00005011400	PARN	99	67.226	Equus_asinus_asinus
ENSMAMG00000006939	parn	84	71.429	ENSECAG00000017792	PARN	99	67.378	Equus_caballus
ENSMAMG00000006939	parn	70	63.514	ENSEEUG00000010370	PARN	78	63.514	Erinaceus_europaeus
ENSMAMG00000006939	parn	100	76.301	ENSELUG00000013139	parn	90	76.879	Esox_lucius
ENSMAMG00000006939	parn	84	72.315	ENSFCAG00000044961	PARN	83	77.985	Felis_catus
ENSMAMG00000006939	parn	83	72.806	ENSFALG00000003911	PARN	89	73.322	Ficedula_albicollis
ENSMAMG00000006939	parn	82	74.132	ENSFDAG00000009234	PARN	90	74.132	Fukomys_damarensis
ENSMAMG00000006939	parn	87	80.705	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSMAMG00000006939	parn	79	86.055	ENSGMOG00000003231	parn	99	86.055	Gadus_morhua
ENSMAMG00000006939	parn	84	71.959	ENSGALG00000003091	PARN	92	72.297	Gallus_gallus
ENSMAMG00000006939	parn	100	83.019	ENSGAFG00000011061	parn	100	82.583	Gambusia_affinis
ENSMAMG00000006939	parn	95	85.567	ENSGACG00000019501	parn	100	82.143	Gasterosteus_aculeatus
ENSMAMG00000006939	parn	84	72.987	ENSGGOG00000025224	PARN	93	77.966	Gorilla_gorilla
ENSMAMG00000006939	parn	100	90.102	ENSHBUG00000017906	parn	100	90.102	Haplochromis_burtoni
ENSMAMG00000006939	parn	82	73.057	ENSHGLG00000010886	PARN	90	73.057	Heterocephalus_glaber_female
ENSMAMG00000006939	parn	82	73.057	ENSHGLG00100014659	PARN	90	73.057	Heterocephalus_glaber_male
ENSMAMG00000006939	parn	79	84.066	ENSHCOG00000008683	parn	94	84.066	Hippocampus_comes
ENSMAMG00000006939	parn	100	61.449	ENSIPUG00000012401	parn	100	61.360	Ictalurus_punctatus
ENSMAMG00000006939	parn	83	72.014	ENSSTOG00000007519	PARN	92	72.014	Ictidomys_tridecemlineatus
ENSMAMG00000006939	parn	84	72.727	ENSJJAG00000023049	Parn	92	72.727	Jaculus_jaculus
ENSMAMG00000006939	parn	100	86.463	ENSKMAG00000009462	parn	100	86.463	Kryptolebias_marmoratus
ENSMAMG00000006939	parn	92	90.079	ENSLBEG00000009167	parn	99	90.079	Labrus_bergylta
ENSMAMG00000006939	parn	73	75.198	ENSLACG00000004207	PARN	100	74.292	Latimeria_chalumnae
ENSMAMG00000006939	parn	100	71.019	ENSLOCG00000000715	parn	100	69.900	Lepisosteus_oculatus
ENSMAMG00000006939	parn	78	77.985	ENSLAFG00000015036	PARN	84	77.985	Loxodonta_africana
ENSMAMG00000006939	parn	84	69.347	ENSMFAG00000044852	PARN	89	77.966	Macaca_fascicularis
ENSMAMG00000006939	parn	84	72.697	ENSMMUG00000018849	PARN	89	77.966	Macaca_mulatta
ENSMAMG00000006939	parn	84	72.697	ENSMNEG00000045108	PARN	89	77.966	Macaca_nemestrina
ENSMAMG00000006939	parn	84	72.529	ENSMLEG00000031743	PARN	89	77.966	Mandrillus_leucophaeus
ENSMAMG00000006939	parn	100	89.374	ENSMZEG00005013590	parn	100	89.374	Maylandia_zebra
ENSMAMG00000006939	parn	83	70.377	ENSMGAG00000001004	PARN	91	70.377	Meleagris_gallopavo
ENSMAMG00000006939	parn	82	67.797	ENSMAUG00000008025	Parn	90	67.797	Mesocricetus_auratus
ENSMAMG00000006939	parn	84	72.148	ENSMICG00000016053	PARN	91	76.271	Microcebus_murinus
ENSMAMG00000006939	parn	72	78.384	ENSMOCG00000022211	Parn	100	78.384	Microtus_ochrogaster
ENSMAMG00000006939	parn	80	89.873	ENSMMOG00000011333	parn	90	89.873	Mola_mola
ENSMAMG00000006939	parn	72	79.879	ENSMODG00000004915	PARN	99	79.879	Monodelphis_domestica
ENSMAMG00000006939	parn	96	92.237	ENSMALG00000019426	parn	97	92.237	Monopterus_albus
ENSMAMG00000006939	parn	82	72.920	MGP_CAROLIEiJ_G0020466	Parn	89	72.920	Mus_caroli
ENSMAMG00000006939	parn	82	72.759	ENSMUSG00000022685	Parn	100	75.610	Mus_musculus
ENSMAMG00000006939	parn	82	72.408	MGP_PahariEiJ_G0016172	Parn	89	72.408	Mus_pahari
ENSMAMG00000006939	parn	78	75.560	MGP_SPRETEiJ_G0021361	Parn	84	75.560	Mus_spretus
ENSMAMG00000006939	parn	84	72.194	ENSMPUG00000014464	PARN	92	72.194	Mustela_putorius_furo
ENSMAMG00000006939	parn	72	77.778	ENSMLUG00000005414	PARN	100	77.778	Myotis_lucifugus
ENSMAMG00000006939	parn	80	90.778	ENSNBRG00000006805	parn	93	90.778	Neolamprologus_brichardi
ENSMAMG00000006939	parn	84	72.819	ENSNLEG00000010241	PARN	91	77.966	Nomascus_leucogenys
ENSMAMG00000006939	parn	68	65.000	ENSMEUG00000008178	-	74	65.000	Notamacropus_eugenii
ENSMAMG00000006939	parn	81	68.229	ENSOPRG00000012187	PARN	90	68.229	Ochotona_princeps
ENSMAMG00000006939	parn	78	70.872	ENSODEG00000001617	PARN	85	70.872	Octodon_degus
ENSMAMG00000006939	parn	100	90.684	ENSONIG00000000151	parn	100	90.684	Oreochromis_niloticus
ENSMAMG00000006939	parn	82	73.621	ENSOCUG00000000322	PARN	90	73.621	Oryctolagus_cuniculus
ENSMAMG00000006939	parn	100	81.514	ENSORLG00020010313	parn	100	81.805	Oryzias_latipes_hni
ENSMAMG00000006939	parn	100	81.368	ENSORLG00015000300	parn	100	81.659	Oryzias_latipes_hsok
ENSMAMG00000006939	parn	100	80.523	ENSOMEG00000019555	parn	100	80.523	Oryzias_melastigma
ENSMAMG00000006939	parn	72	77.823	ENSOGAG00000014626	PARN	100	77.823	Otolemur_garnettii
ENSMAMG00000006939	parn	72	78.990	ENSOARG00000007574	PARN	100	78.990	Ovis_aries
ENSMAMG00000006939	parn	84	72.819	ENSPPAG00000031438	PARN	91	77.966	Pan_paniscus
ENSMAMG00000006939	parn	84	72.315	ENSPPRG00000018583	PARN	83	77.985	Panthera_pardus
ENSMAMG00000006939	parn	78	77.985	ENSPTIG00000012135	PARN	83	77.985	Panthera_tigris_altaica
ENSMAMG00000006939	parn	84	72.819	ENSPTRG00000007792	PARN	91	77.966	Pan_troglodytes
ENSMAMG00000006939	parn	84	70.519	ENSPANG00000020099	PARN	89	77.966	Papio_anubis
ENSMAMG00000006939	parn	99	69.373	ENSPKIG00000022807	parn	91	74.310	Paramormyrops_kingsleyae
ENSMAMG00000006939	parn	82	74.828	ENSPSIG00000014804	PARN	90	74.828	Pelodiscus_sinensis
ENSMAMG00000006939	parn	90	78.387	ENSPMGG00000014431	parn	85	78.641	Periophthalmus_magnuspinnatus
ENSMAMG00000006939	parn	82	71.280	ENSPEMG00000018439	Parn	90	71.280	Peromyscus_maniculatus_bairdii
ENSMAMG00000006939	parn	77	68.620	ENSPMAG00000003956	parn	99	68.620	Petromyzon_marinus
ENSMAMG00000006939	parn	61	71.262	ENSPCIG00000001259	PARN	91	77.966	Phascolarctos_cinereus
ENSMAMG00000006939	parn	100	83.552	ENSPFOG00000012823	parn	100	83.697	Poecilia_formosa
ENSMAMG00000006939	parn	100	83.697	ENSPLAG00000006395	parn	100	83.843	Poecilia_latipinna
ENSMAMG00000006939	parn	100	83.697	ENSPMEG00000007711	parn	100	83.843	Poecilia_mexicana
ENSMAMG00000006939	parn	100	83.988	ENSPREG00000000147	parn	100	84.134	Poecilia_reticulata
ENSMAMG00000006939	parn	84	72.408	ENSPPYG00000007123	PARN	92	72.408	Pongo_abelii
ENSMAMG00000006939	parn	73	67.793	ENSPCAG00000001741	PARN	82	67.793	Procavia_capensis
ENSMAMG00000006939	parn	82	70.326	ENSPCOG00000019292	PARN	91	76.271	Propithecus_coquereli
ENSMAMG00000006939	parn	77	74.858	ENSPVAG00000002547	PARN	83	74.858	Pteropus_vampyrus
ENSMAMG00000006939	parn	100	89.956	ENSPNYG00000006835	parn	100	89.956	Pundamilia_nyererei
ENSMAMG00000006939	parn	93	71.451	ENSPNAG00000018905	parn	100	71.163	Pygocentrus_nattereri
ENSMAMG00000006939	parn	83	71.502	ENSRNOG00000002912	Parn	96	76.531	Rattus_norvegicus
ENSMAMG00000006939	parn	84	71.022	ENSSBOG00000034726	PARN	89	77.966	Saimiri_boliviensis_boliviensis
ENSMAMG00000006939	parn	61	78.230	ENSSHAG00000008493	PARN	93	78.230	Sarcophilus_harrisii
ENSMAMG00000006939	parn	100	70.798	ENSSFOG00015014165	parn	98	75.459	Scleropages_formosus
ENSMAMG00000006939	parn	100	87.000	ENSSMAG00000000685	parn	100	87.000	Scophthalmus_maximus
ENSMAMG00000006939	parn	100	91.437	ENSSDUG00000014555	parn	100	91.872	Seriola_dumerili
ENSMAMG00000006939	parn	63	79.310	ENSSARG00000014339	PARN	75	79.310	Sorex_araneus
ENSMAMG00000006939	parn	84	72.987	ENSSPUG00000007719	PARN	91	72.987	Sphenodon_punctatus
ENSMAMG00000006939	parn	100	90.247	ENSSPAG00000007095	parn	100	90.247	Stegastes_partitus
ENSMAMG00000006939	parn	83	72.852	ENSSSCG00000007878	PARN	81	72.852	Sus_scrofa
ENSMAMG00000006939	parn	82	73.345	ENSTGUG00000004971	PARN	89	73.868	Taeniopygia_guttata
ENSMAMG00000006939	parn	83	89.842	ENSTNIG00000008252	parn	90	90.543	Tetraodon_nigroviridis
ENSMAMG00000006939	parn	80	59.220	ENSTBEG00000010407	PARN	94	59.574	Tupaia_belangeri
ENSMAMG00000006939	parn	71	78.645	ENSTTRG00000002843	PARN	77	78.645	Tursiops_truncatus
ENSMAMG00000006939	parn	63	70.709	ENSUAMG00000008283	PARN	94	66.819	Ursus_americanus
ENSMAMG00000006939	parn	84	72.222	ENSUMAG00000004527	PARN	92	72.222	Ursus_maritimus
ENSMAMG00000006939	parn	81	69.811	ENSVPAG00000008968	PARN	93	69.811	Vicugna_pacos
ENSMAMG00000006939	parn	84	71.980	ENSVVUG00000019509	PARN	92	71.980	Vulpes_vulpes
ENSMAMG00000006939	parn	82	72.117	ENSXETG00000010994	parn	100	76.604	Xenopus_tropicalis
ENSMAMG00000006939	parn	87	81.910	ENSXCOG00000015990	parn	99	82.077	Xiphophorus_couchianus
ENSMAMG00000006939	parn	100	82.969	ENSXMAG00000014783	parn	100	82.824	Xiphophorus_maculatus