EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007046 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 12899 bases
Position: chrOOHQ01000044.1:16222312-16235210
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000010451	zf-C2H2	PF00096.26	2.6e-22	1	4
ENSMAMP00000010451	zf-C2H2	PF00096.26	2.6e-22	2	4
ENSMAMP00000010451	zf-C2H2	PF00096.26	2.6e-22	3	4
ENSMAMP00000010451	zf-C2H2	PF00096.26	2.6e-22	4	4
ENSMAMP00000010446	zf-C2H2	PF00096.26	6.3e-19	1	2
ENSMAMP00000010446	zf-C2H2	PF00096.26	6.3e-19	2	2
ENSMAMP00000010451	zf-met	PF12874.7	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000010712	-	5463	-	ENSMAMP00000010446	1820 (aa)	-	-
ENSMAMT00000010717	-	2259	-	ENSMAMP00000010451	666 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007046	-	53	40.741	ENSMAMG00000006312	-	93	39.698
ENSMAMG00000007046	-	61	35.385	ENSMAMG00000002542	zbtb16a	71	35.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007046	-	98	57.585	ENSSDUG00000000909	-	94	68.786	Seriola_dumerili
ENSMAMG00000007046	-	98	57.437	ENSSLDG00000007500	-	99	51.660	Seriola_lalandi_dorsalis