EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007069 (Gene tree)
Gene ID: -
Gene Symbol: srcap
Alias: im:7137889|im:7138264
Full Name: Snf2-related CREBBP activator protein
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 20813 bases
Position: chrOOHQ01000019.1:17679287-17700099
Accession: ZDB-GENE-041008-127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000010623	ResIII	PF04851.15	1.7e-05	1	1
ENSMAMP00000010681	ResIII	PF04851.15	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000010897	-	2451	-	ENSMAMP00000010623	816 (aa)	-	-
ENSMAMT00000010956	-	1611	-	ENSMAMP00000010681	536 (aa)	-	-
ENSMAMT00000011067	-	8496	-	ENSMAMP00000010788	2831 (aa)	-	-
ENSMAMT00000011042	-	8871	-	ENSMAMP00000010763	2956 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007069	srcap	87	41.350	ENSMAMG00000012822	chd1l	53	41.401
ENSMAMG00000007069	srcap	84	48.454	ENSMAMG00000009850	hells	78	37.158
ENSMAMG00000007069	srcap	87	30.315	ENSMAMG00000022180	rad54l	74	30.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007069	srcap	91	93.164	ENSACIG00000012023	-	94	93.164	Amphilophus_citrinellus
ENSMAMG00000007069	srcap	96	53.047	ENSCING00000004687	-	58	67.213	Ciona_intestinalis
ENSMAMG00000007069	srcap	90	94.747	ENSCVAG00000012049	-	84	94.747	Cyprinodon_variegatus
ENSMAMG00000007069	srcap	98	88.058	ENSFHEG00000005432	srcap	96	87.696	Fundulus_heteroclitus
ENSMAMG00000007069	srcap	93	82.603	ENSHCOG00000003632	-	91	83.676	Hippocampus_comes
ENSMAMG00000007069	srcap	96	89.385	ENSLBEG00000009390	-	95	96.471	Labrus_bergylta
ENSMAMG00000007069	srcap	94	88.071	ENSMZEG00005008455	-	84	88.071	Maylandia_zebra
ENSMAMG00000007069	srcap	63	90.149	MGP_CAROLIEiJ_G0030507	-	78	90.358	Mus_caroli
ENSMAMG00000007069	srcap	50	92.963	ENSXETG00000034041	-	100	92.647	Xenopus_tropicalis
ENSMAMG00000007069	srcap	95	89.057	ENSXCOG00000003602	srcap	93	88.931	Xiphophorus_couchianus