EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000007131 (Gene tree)
Gene ID: 113123677
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 15520 bases
Position: chrOOHQ01000093.1:240325-255844
Accession: 113123677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000010567	Nop52	PF05997.12	3.2e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000010838	-	3048	-	ENSMAMP00000010567	1015 (aa)	XP_026151687	UPI000E45B76C

Gene Model

Click here to download ENSMAMG00000007131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007131's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007131	-	100	54.294	ENSAPOG00000007490	-	100	54.371	Acanthochromis_polyacanthus
ENSMAMG00000007131	-	95	53.728	ENSAOCG00000017894	-	100	79.787	Amphiprion_ocellaris
ENSMAMG00000007131	-	100	54.457	ENSAPEG00000024150	-	100	55.652	Amphiprion_percula
ENSMAMG00000007131	-	100	54.939	ENSATEG00000005045	-	100	55.985	Anabas_testudineus
ENSMAMG00000007131	-	66	70.170	ENSFHEG00000016314	-	87	66.761	Fundulus_heteroclitus
ENSMAMG00000007131	-	63	63.496	ENSGACG00000001438	rrp1	78	71.582	Gasterosteus_aculeatus
ENSMAMG00000007131	-	53	61.737	ENSHBUG00000003766	-	71	60.329	Haplochromis_burtoni
ENSMAMG00000007131	-	55	64.604	ENSHCOG00000018388	-	71	61.111	Hippocampus_comes
ENSMAMG00000007131	-	56	64.439	ENSKMAG00000005539	rrp1	93	61.758	Kryptolebias_marmoratus
ENSMAMG00000007131	-	50	46.883	ENSLACG00000017332	-	70	48.615	Latimeria_chalumnae
ENSMAMG00000007131	-	60	61.869	ENSORLG00020007199	-	69	60.859	Oryzias_latipes_hni
ENSMAMG00000007131	-	57	62.374	ENSORLG00015004425	-	66	60.859	Oryzias_latipes_hsok
ENSMAMG00000007131	-	56	61.153	ENSOMEG00000016910	-	69	60.500	Oryzias_melastigma
ENSMAMG00000007131	-	54	67.467	ENSPFOG00000007424	-	70	66.933	Poecilia_formosa
ENSMAMG00000007131	-	55	67.519	ENSPMEG00000007042	-	69	67.008	Poecilia_mexicana
ENSMAMG00000007131	-	59	68.542	ENSPREG00000015673	-	73	68.031	Poecilia_reticulata
ENSMAMG00000007131	-	50	61.538	ENSPNAG00000007718	-	50	62.500	Pygocentrus_nattereri
ENSMAMG00000007131	-	52	53.659	ENSSFOG00015003932	-	74	49.127	Scleropages_formosus
ENSMAMG00000007131	-	100	58.796	ENSSMAG00000016847	-	93	75.907	Scophthalmus_maximus
ENSMAMG00000007131	-	100	55.429	ENSSLDG00000002538	-	100	57.714	Seriola_lalandi_dorsalis
ENSMAMG00000007131	-	56	56.009	ENSTNIG00000005053	rrp1	75	63.359	Tetraodon_nigroviridis
ENSMAMG00000007131	-	50	45.278	ENSXETG00000013683	rrp1b	78	45.098	Xenopus_tropicalis
ENSMAMG00000007131	-	56	67.082	ENSXMAG00000023123	-	71	64.339	Xiphophorus_maculatus