EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007196 (Gene tree)
Gene ID: 113137076
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 10672 bases
Position: chrOOHQ01000069.1:6971512-6982183
Accession: 113137076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000010679	SAP	PF02037.27	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000010954	-	4990	-	ENSMAMP00000010679	805 (aa)	XP_026174212	UPI000E466063
ENSMAMT00000010984	-	1578	-	ENSMAMP00000010708	525 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007196	hnrnpub	92	41.593	ENSMAMG00000014383	HNRNPUL1	78	41.496
ENSMAMG00000007196	hnrnpub	75	33.117	ENSMAMG00000021489	si:ch211-107m4.1	71	35.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007196	hnrnpub	86	73.077	ENSG00000153187	HNRNPU	99	65.667	Homo_sapiens
ENSMAMG00000007196	hnrnpub	100	89.330	ENSAPOG00000017400	hnrnpub	100	88.337	Acanthochromis_polyacanthus
ENSMAMG00000007196	hnrnpub	86	73.077	ENSAMEG00000009145	HNRNPU	77	73.077	Ailuropoda_melanoleuca
ENSMAMG00000007196	hnrnpub	100	85.359	ENSACIG00000012138	hnrnpub	96	87.113	Amphilophus_citrinellus
ENSMAMG00000007196	hnrnpub	100	90.819	ENSAOCG00000015843	hnrnpub	100	89.826	Amphiprion_ocellaris
ENSMAMG00000007196	hnrnpub	100	90.819	ENSAPEG00000014679	hnrnpub	100	89.826	Amphiprion_percula
ENSMAMG00000007196	hnrnpub	98	93.585	ENSATEG00000016178	hnrnpub	97	93.962	Anabas_testudineus
ENSMAMG00000007196	hnrnpub	87	68.750	ENSACAG00000004511	HNRNPU	78	68.750	Anolis_carolinensis
ENSMAMG00000007196	hnrnpub	80	58.050	ENSANAG00000033895	-	79	59.794	Aotus_nancymaae
ENSMAMG00000007196	hnrnpub	100	86.881	ENSACLG00000008165	hnrnpub	100	87.005	Astatotilapia_calliptera
ENSMAMG00000007196	hnrnpub	86	73.077	ENSBTAG00000007606	HNRNPU	79	73.077	Bos_taurus
ENSMAMG00000007196	hnrnpub	86	73.077	ENSCJAG00000016914	HNRNPU	98	55.862	Callithrix_jacchus
ENSMAMG00000007196	hnrnpub	80	58.359	ENSCAFG00020000918	HNRNPU	75	57.910	Canis_lupus_dingo
ENSMAMG00000007196	hnrnpub	80	58.204	ENSCHIG00000004900	HNRNPU	75	57.761	Capra_hircus
ENSMAMG00000007196	hnrnpub	86	75.000	ENSCPOG00000011887	HNRNPU	80	75.000	Cavia_porcellus
ENSMAMG00000007196	hnrnpub	86	73.077	ENSCCAG00000037859	-	79	73.077	Cebus_capucinus
ENSMAMG00000007196	hnrnpub	86	73.077	ENSCATG00000035273	HNRNPU	79	73.077	Cercocebus_atys
ENSMAMG00000007196	hnrnpub	86	75.000	ENSCLAG00000007100	HNRNPU	80	75.000	Chinchilla_lanigera
ENSMAMG00000007196	hnrnpub	80	58.050	ENSCSAG00000009219	HNRNPU	75	57.463	Chlorocebus_sabaeus
ENSMAMG00000007196	hnrnpub	86	73.077	ENSCHOG00000001387	HNRNPU	77	73.077	Choloepus_hoffmanni
ENSMAMG00000007196	hnrnpub	82	62.413	ENSCPBG00000009415	HNRNPU	79	68.519	Chrysemys_picta_bellii
ENSMAMG00000007196	hnrnpub	86	73.077	ENSCANG00000022780	HNRNPU	78	73.077	Colobus_angolensis_palliatus
ENSMAMG00000007196	hnrnpub	100	78.683	ENSCSEG00000010804	hnrnpub	100	82.275	Cynoglossus_semilaevis
ENSMAMG00000007196	hnrnpub	93	80.357	ENSCVAG00000004280	hnrnpub	95	71.204	Cyprinodon_variegatus
ENSMAMG00000007196	hnrnpub	100	61.224	ENSDARG00000004735	hnrnpub	100	58.944	Danio_rerio
ENSMAMG00000007196	hnrnpub	100	60.859	ENSDARG00000015206	hnrnpua	100	60.988	Danio_rerio
ENSMAMG00000007196	hnrnpub	99	53.102	ENSDNOG00000000215	HNRNPU	88	75.510	Dasypus_novemcinctus
ENSMAMG00000007196	hnrnpub	80	54.799	ENSDORG00000015491	Hnrnpu	74	58.525	Dipodomys_ordii
ENSMAMG00000007196	hnrnpub	86	73.077	ENSETEG00000014565	HNRNPU	79	73.077	Echinops_telfairi
ENSMAMG00000007196	hnrnpub	81	57.991	ENSEASG00005003017	HNRNPU	75	57.567	Equus_asinus_asinus
ENSMAMG00000007196	hnrnpub	81	57.839	ENSECAG00000007955	HNRNPU	75	57.418	Equus_caballus
ENSMAMG00000007196	hnrnpub	100	59.777	ENSELUG00000011966	hnrnpua	98	68.515	Esox_lucius
ENSMAMG00000007196	hnrnpub	100	74.882	ENSELUG00000010733	hnrnpub	100	75.708	Esox_lucius
ENSMAMG00000007196	hnrnpub	80	58.050	ENSFCAG00000002156	HNRNPU	74	57.612	Felis_catus
ENSMAMG00000007196	hnrnpub	91	75.000	ENSFDAG00000006026	HNRNPU	99	75.000	Fukomys_damarensis
ENSMAMG00000007196	hnrnpub	100	81.409	ENSFHEG00000022639	hnrnpub	100	82.360	Fundulus_heteroclitus
ENSMAMG00000007196	hnrnpub	100	74.163	ENSGMOG00000001755	hnrnpub	99	73.918	Gadus_morhua
ENSMAMG00000007196	hnrnpub	86	78.261	ENSGALG00000010671	HNRNPU	77	78.261	Gallus_gallus
ENSMAMG00000007196	hnrnpub	85	87.608	ENSGAFG00000009369	hnrnpub	100	82.134	Gambusia_affinis
ENSMAMG00000007196	hnrnpub	100	76.389	ENSGACG00000004679	hnrnpub	99	77.803	Gasterosteus_aculeatus
ENSMAMG00000007196	hnrnpub	86	73.077	ENSGGOG00000004061	HNRNPU	79	73.077	Gorilla_gorilla
ENSMAMG00000007196	hnrnpub	100	87.252	ENSHBUG00000012290	hnrnpub	100	87.005	Haplochromis_burtoni
ENSMAMG00000007196	hnrnpub	86	75.000	ENSHGLG00000010594	-	77	75.000	Heterocephalus_glaber_female
ENSMAMG00000007196	hnrnpub	91	75.000	ENSHGLG00100015093	HNRNPU	99	75.000	Heterocephalus_glaber_male
ENSMAMG00000007196	hnrnpub	100	74.248	ENSHCOG00000020091	hnrnpub	100	77.978	Hippocampus_comes
ENSMAMG00000007196	hnrnpub	100	67.990	ENSIPUG00000007749	hnrnpu	94	77.966	Ictalurus_punctatus
ENSMAMG00000007196	hnrnpub	86	75.000	ENSJJAG00000011371	Hnrnpu	80	75.000	Jaculus_jaculus
ENSMAMG00000007196	hnrnpub	100	83.415	ENSKMAG00000004532	hnrnpub	100	85.348	Kryptolebias_marmoratus
ENSMAMG00000007196	hnrnpub	85	92.743	ENSLBEG00000022520	hnrnpub	100	89.106	Labrus_bergylta
ENSMAMG00000007196	hnrnpub	99	46.482	ENSLACG00000017463	HNRNPU	74	52.489	Latimeria_chalumnae
ENSMAMG00000007196	hnrnpub	87	72.023	ENSLOCG00000016652	hnrnpua	99	61.068	Lepisosteus_oculatus
ENSMAMG00000007196	hnrnpub	87	73.077	ENSLAFG00000021377	HNRNPU	79	73.077	Loxodonta_africana
ENSMAMG00000007196	hnrnpub	86	73.077	ENSMFAG00000037308	HNRNPU	79	73.077	Macaca_fascicularis
ENSMAMG00000007196	hnrnpub	80	58.050	ENSMMUG00000021098	HNRNPU	75	57.463	Macaca_mulatta
ENSMAMG00000007196	hnrnpub	86	73.077	ENSMNEG00000043645	HNRNPU	79	73.077	Macaca_nemestrina
ENSMAMG00000007196	hnrnpub	100	86.881	ENSMZEG00005003185	hnrnpub	100	87.005	Maylandia_zebra
ENSMAMG00000007196	hnrnpub	86	73.077	ENSMICG00000004616	HNRNPU	79	73.077	Microcebus_murinus
ENSMAMG00000007196	hnrnpub	86	73.585	ENSMODG00000006515	HNRNPU	79	73.585	Monodelphis_domestica
ENSMAMG00000007196	hnrnpub	96	91.388	ENSMALG00000018243	hnrnpub	99	91.774	Monopterus_albus
ENSMAMG00000007196	hnrnpub	66	63.388	ENSMUSG00000039630	Hnrnpu	81	75.000	Mus_musculus
ENSMAMG00000007196	hnrnpub	87	71.154	ENSMLUG00000000475	HNRNPU	81	71.154	Myotis_lucifugus
ENSMAMG00000007196	hnrnpub	80	54.799	ENSNGAG00000019075	Hnrnpu	75	57.612	Nannospalax_galili
ENSMAMG00000007196	hnrnpub	100	86.881	ENSNBRG00000017855	hnrnpub	100	87.005	Neolamprologus_brichardi
ENSMAMG00000007196	hnrnpub	79	73.585	ENSMEUG00000000541	HNRNPU	84	73.585	Notamacropus_eugenii
ENSMAMG00000007196	hnrnpub	100	85.839	ENSONIG00000001260	hnrnpub	100	85.590	Oreochromis_niloticus
ENSMAMG00000007196	hnrnpub	79	73.077	ENSOCUG00000014469	HNRNPU	74	73.077	Oryctolagus_cuniculus
ENSMAMG00000007196	hnrnpub	100	86.725	ENSORLG00000016114	hnrnpub	100	86.973	Oryzias_latipes
ENSMAMG00000007196	hnrnpub	100	86.725	ENSORLG00020005363	hnrnpub	100	87.221	Oryzias_latipes_hni
ENSMAMG00000007196	hnrnpub	100	86.725	ENSORLG00015001190	hnrnpub	100	87.221	Oryzias_latipes_hsok
ENSMAMG00000007196	hnrnpub	100	84.864	ENSOMEG00000014951	hnrnpub	100	85.963	Oryzias_melastigma
ENSMAMG00000007196	hnrnpub	80	58.359	ENSOGAG00000014024	HNRNPU	75	57.761	Otolemur_garnettii
ENSMAMG00000007196	hnrnpub	86	73.077	ENSOARG00000004985	HNRNPU	87	73.077	Ovis_aries
ENSMAMG00000007196	hnrnpub	86	73.077	ENSPPAG00000038652	HNRNPU	79	73.077	Pan_paniscus
ENSMAMG00000007196	hnrnpub	89	73.077	ENSPPRG00000002662	HNRNPU	79	73.077	Panthera_pardus
ENSMAMG00000007196	hnrnpub	86	73.077	ENSPTRG00000002182	HNRNPU	79	73.077	Pan_troglodytes
ENSMAMG00000007196	hnrnpub	80	58.050	ENSPANG00000011643	HNRNPU	79	59.794	Papio_anubis
ENSMAMG00000007196	hnrnpub	100	68.039	ENSPKIG00000022332	hnrnpub	100	67.473	Paramormyrops_kingsleyae
ENSMAMG00000007196	hnrnpub	100	67.956	ENSPKIG00000006885	hnrnpua	100	68.077	Paramormyrops_kingsleyae
ENSMAMG00000007196	hnrnpub	86	73.585	ENSPCIG00000008657	HNRNPU	78	73.585	Phascolarctos_cinereus
ENSMAMG00000007196	hnrnpub	100	84.390	ENSPFOG00000002908	hnrnpub	100	84.634	Poecilia_formosa
ENSMAMG00000007196	hnrnpub	100	83.902	ENSPLAG00000004160	hnrnpub	100	83.741	Poecilia_latipinna
ENSMAMG00000007196	hnrnpub	80	56.656	ENSPCOG00000003883	-	77	56.334	Propithecus_coquereli
ENSMAMG00000007196	hnrnpub	86	73.077	ENSPCOG00000018655	-	79	73.077	Propithecus_coquereli
ENSMAMG00000007196	hnrnpub	86	73.077	ENSPVAG00000002581	HNRNPU	79	73.077	Pteropus_vampyrus
ENSMAMG00000007196	hnrnpub	100	87.252	ENSPNYG00000021642	hnrnpub	100	87.376	Pundamilia_nyererei
ENSMAMG00000007196	hnrnpub	100	67.509	ENSPNAG00000001055	hnrnpub	100	61.021	Pygocentrus_nattereri
ENSMAMG00000007196	hnrnpub	66	63.388	ENSRNOG00000033790	Hnrnpu	82	75.000	Rattus_norvegicus
ENSMAMG00000007196	hnrnpub	80	57.276	ENSRBIG00000031519	HNRNPU	78	58.935	Rhinopithecus_bieti
ENSMAMG00000007196	hnrnpub	82	57.357	ENSRROG00000041642	HNRNPU	76	61.023	Rhinopithecus_roxellana
ENSMAMG00000007196	hnrnpub	100	65.988	ENSSFOG00015019004	hnrnpu	100	65.591	Scleropages_formosus
ENSMAMG00000007196	hnrnpub	100	68.712	ENSSFOG00015001124	hnrnpub	82	73.939	Scleropages_formosus
ENSMAMG00000007196	hnrnpub	100	87.292	ENSSMAG00000003607	hnrnpub	100	85.986	Scophthalmus_maximus
ENSMAMG00000007196	hnrnpub	100	92.166	ENSSDUG00000005912	hnrnpub	100	92.044	Seriola_dumerili
ENSMAMG00000007196	hnrnpub	100	91.585	ENSSLDG00000004899	hnrnpub	100	91.341	Seriola_lalandi_dorsalis
ENSMAMG00000007196	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	80	73.077	Sphenodon_punctatus
ENSMAMG00000007196	hnrnpub	100	90.062	ENSSPAG00000011853	hnrnpub	100	90.571	Stegastes_partitus
ENSMAMG00000007196	hnrnpub	86	73.077	ENSSSCG00000010877	HNRNPU	79	73.077	Sus_scrofa
ENSMAMG00000007196	hnrnpub	100	81.730	ENSTRUG00000007759	hnrnpub	100	83.800	Takifugu_rubripes
ENSMAMG00000007196	hnrnpub	100	77.063	ENSTNIG00000009725	hnrnpub	100	77.750	Tetraodon_nigroviridis
ENSMAMG00000007196	hnrnpub	86	73.077	ENSUAMG00000021120	HNRNPU	79	73.077	Ursus_americanus
ENSMAMG00000007196	hnrnpub	87	66.038	ENSUMAG00000012322	HNRNPU	86	66.038	Ursus_maritimus
ENSMAMG00000007196	hnrnpub	80	73.077	ENSVPAG00000010520	HNRNPU	83	73.077	Vicugna_pacos
ENSMAMG00000007196	hnrnpub	80	58.359	ENSVVUG00000026524	HNRNPU	75	57.910	Vulpes_vulpes
ENSMAMG00000007196	hnrnpub	99	49.302	ENSXETG00000011386	hnrnpu	79	84.444	Xenopus_tropicalis
ENSMAMG00000007196	hnrnpub	100	84.268	ENSXMAG00000010356	hnrnpub	100	84.756	Xiphophorus_maculatus