EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007306 (Gene tree)
Gene ID: 113139120
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 3681 bases
Position: chrOOHQ01000107.1:16518030-16521710
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000010881	RIO1	PF01163.22	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011140	-	2355	-	ENSMAMP00000010860	784 (aa)	-	-
ENSMAMT00000011162	-	660	-	ENSMAMP00000010881	219 (aa)	-	-
ENSMAMT00000011112	-	1044	-	ENSMAMP00000010832	347 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007306	-	96	37.281	ENSMAMG00000002080	mapk12a	61	37.281
ENSMAMG00000007306	-	99	31.982	ENSMAMG00000008349	rps6ka4	55	31.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007306	-	97	84.685	ENSAPOG00000022651	-	80	84.305	Acanthochromis_polyacanthus
ENSMAMG00000007306	-	99	82.488	ENSACIG00000007967	-	100	82.488	Amphilophus_citrinellus
ENSMAMG00000007306	-	100	82.684	ENSAPEG00000023702	-	72	82.684	Amphiprion_percula
ENSMAMG00000007306	-	96	64.091	ENSCING00000000662	-	100	64.091	Ciona_intestinalis
ENSMAMG00000007306	-	98	62.054	ENSCSAVG00000000006	-	82	62.054	Ciona_savignyi
ENSMAMG00000007306	-	97	82.432	ENSCSEG00000005706	-	99	82.432	Cynoglossus_semilaevis
ENSMAMG00000007306	-	99	81.416	ENSMZEG00005019656	-	99	82.353	Maylandia_zebra
ENSMAMG00000007306	-	100	79.654	ENSONIG00000011659	-	65	79.654	Oreochromis_niloticus
ENSMAMG00000007306	-	90	80.193	ENSPMGG00000020544	-	88	80.193	Periophthalmus_magnuspinnatus
ENSMAMG00000007306	-	99	80.617	ENSPNYG00000006499	-	99	81.900	Pundamilia_nyererei