EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007392 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 7010 bases
Position: chrOOHQ01000039.1:20860592-20867601
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000010914	zf-C2H2	PF00096.26	3.4e-31	1	6
ENSMAMP00000010914	zf-C2H2	PF00096.26	3.4e-31	2	6
ENSMAMP00000010914	zf-C2H2	PF00096.26	3.4e-31	3	6
ENSMAMP00000010914	zf-C2H2	PF00096.26	3.4e-31	4	6
ENSMAMP00000010914	zf-C2H2	PF00096.26	3.4e-31	5	6
ENSMAMP00000010914	zf-C2H2	PF00096.26	3.4e-31	6	6
ENSMAMP00000010914	zf-met	PF12874.7	0.00019	1	2
ENSMAMP00000010914	zf-met	PF12874.7	0.00019	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011195	-	4746	-	ENSMAMP00000010914	808 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007392	-	59	45.366	ENSMAMG00000017946	-	70	43.529
ENSMAMG00000007392	-	56	46.400	ENSMAMG00000018114	-	78	51.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007392	-	54	47.170	ENSAPOG00000020343	-	75	47.170	Acanthochromis_polyacanthus
ENSMAMG00000007392	-	59	45.228	ENSAOCG00000018307	-	90	45.570	Amphiprion_ocellaris
ENSMAMG00000007392	-	99	42.940	ENSAOCG00000014651	-	99	42.824	Amphiprion_ocellaris
ENSMAMG00000007392	-	57	42.353	ENSAPEG00000019527	-	61	40.000	Amphiprion_percula
ENSMAMG00000007392	-	52	46.330	ENSAPEG00000007141	-	52	46.330	Amphiprion_percula
ENSMAMG00000007392	-	60	73.874	ENSCVAG00000012213	-	50	73.874	Cyprinodon_variegatus
ENSMAMG00000007392	-	51	49.091	ENSEBUG00000011112	-	67	49.091	Eptatretus_burgeri
ENSMAMG00000007392	-	54	47.959	ENSHBUG00000007068	-	61	47.959	Haplochromis_burtoni
ENSMAMG00000007392	-	99	40.814	ENSKMAG00000006231	-	95	76.786	Kryptolebias_marmoratus
ENSMAMG00000007392	-	55	50.602	ENSKMAG00000010499	-	67	50.602	Kryptolebias_marmoratus
ENSMAMG00000007392	-	72	47.541	ENSMALG00000005562	-	69	47.541	Monopterus_albus
ENSMAMG00000007392	-	99	49.311	ENSMALG00000003975	-	94	72.052	Monopterus_albus
ENSMAMG00000007392	-	51	49.541	ENSNBRG00000016234	-	63	49.541	Neolamprologus_brichardi
ENSMAMG00000007392	-	50	46.061	ENSNBRG00000001163	-	89	51.546	Neolamprologus_brichardi
ENSMAMG00000007392	-	51	58.182	ENSONIG00000009379	-	100	58.182	Oreochromis_niloticus
ENSMAMG00000007392	-	56	38.554	ENSPMGG00000023739	-	50	38.650	Periophthalmus_magnuspinnatus
ENSMAMG00000007392	-	83	50.000	ENSSMAG00000009685	-	97	49.099	Scophthalmus_maximus
ENSMAMG00000007392	-	99	48.725	ENSSDUG00000000786	-	92	57.143	Seriola_dumerili
ENSMAMG00000007392	-	50	43.750	ENSSPAG00000014689	-	90	43.750	Stegastes_partitus
ENSMAMG00000007392	-	99	40.046	ENSSPAG00000020960	-	90	66.058	Stegastes_partitus
ENSMAMG00000007392	-	50	44.397	ENSSPAG00000012009	-	85	48.889	Stegastes_partitus
ENSMAMG00000007392	-	53	40.367	ENSTRUG00000020582	-	88	43.220	Takifugu_rubripes